LOC100288955 17216

Name: LOC100288955	Sequence: fasta or formatted (296aa)		NCBI GI: 239742378
Description: PREDICTED: hypothetical protein XP_002342507		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.5 40 4 C cysteine 2.0 6 1 D aspartate 1.7 5 1 E glutamate 2.7 8 2 F phenylalanine 3.4 10 2 G glycine 11.5 34 2 H histidine 1.7 5 1 I isoleucine 1.7 5 1 K lysine 2.0 6 1 L leucine 9.5 28 2 M methionine 0.3 1 1 N asparagine 0.3 1 1 P proline 11.1 33 2 Q glutamine 3.0 9 1 R arginine 15.5 46 2 S serine 6.8 20 2 T threonine 5.1 15 2 V valine 5.7 17 1 W tryptophan 0.7 2 1 Y tyrosine 1.7 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342507 LOC100292234 1.000 PREDICTED: hypothetical protein LOC100290708 1.000 PREDICTED: hypothetical protein XP_002346660 FLJ37078 0.042 hypothetical protein LOC222183 LOC729162 0.038 PREDICTED: similar to hCG1981372 BBC3 0.038 BCL2 binding component 3 isoform 1 CASKIN1 0.037 CASK interacting protein 1 COL1A1 0.037 alpha 1 type I collagen preproprotein LOC100293492 0.035 PREDICTED: hypothetical protein LOC729162 0.035 PREDICTED: similar to hCG1981372 LOC389906 0.035 PREDICTED: similar to Serine/threonine-protein kina... LOC100292184 0.035 PREDICTED: hypothetical protein PRR12 0.035 proline rich 12 LOC645321 0.035 PREDICTED: hypothetical protein LOC645321 0.035 PREDICTED: hypothetical protein LOC731282 0.033 PREDICTED: hypothetical protein LOC731282 0.033 PREDICTED: hypothetical protein DACT3 0.033 thymus expressed gene 3-like FLJ22184 0.031 PREDICTED: hypothetical protein LOC80164 LOC100291533 0.031 PREDICTED: hypothetical protein XP_002347080 LOC100288002 0.031 PREDICTED: hypothetical protein XP_002342946 LOC100131455 0.030 PREDICTED: hypothetical protein LOC100131102 0.030 PREDICTED: hypothetical protein LOC100131455 0.030 PREDICTED: hypothetical protein LOC100131102 0.030 PREDICTED: hypothetical protein LOC100131455 0.030 PREDICTED: hypothetical protein TAF4 0.030 TBP-associated factor 4 COL4A2 0.030 alpha 2 type IV collagen preproprotein SYDE1 0.030 synapse defective 1, Rho GTPase, homolog 1 COL1A2 0.030 alpha 2 type I collagen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.