BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239752072 PREDICTED: hypothetical protein XP_002348098 [Homo sapiens] (45 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239757562 PREDICTED: similar to Keratin-associated protein 22... 108 1e-24 gi|239752072 PREDICTED: hypothetical protein XP_002348098 [Homo ... 108 1e-24 gi|239746569 PREDICTED: hypothetical protein XP_002343781 [Homo ... 108 1e-24 gi|31791014 keratin associated protein 20-2 [Homo sapiens] 46 7e-06 gi|169206147 PREDICTED: hypothetical protein [Homo sapiens] 42 1e-04 gi|239750526 PREDICTED: hypothetical protein [Homo sapiens] 42 1e-04 gi|169205935 PREDICTED: hypothetical protein [Homo sapiens] 42 1e-04 gi|239744833 PREDICTED: hypothetical protein [Homo sapiens] 37 0.003 gi|31791020 keratin associated protein 20-1 [Homo sapiens] 35 0.010 gi|149944573 keratin associated protein 19-8 [Homo sapiens] 35 0.013 gi|153945796 keratin associated protein 6-3 [Homo sapiens] 35 0.013 gi|31791010 keratin associated protein 21-1 [Homo sapiens] 34 0.022 gi|31791012 keratin associated protein 22-1 [Homo sapiens] 34 0.029 gi|31791026 keratin associated protein 19-3 [Homo sapiens] 33 0.049 gi|31791038 keratin associated protein 6-1 [Homo sapiens] 33 0.064 gi|31791018 keratin associated protein 19-7 [Homo sapiens] 33 0.064 gi|31791040 keratin associated protein 6-2 [Homo sapiens] 32 0.084 gi|189303554 keratin associated protein 20-3 [Homo sapiens] 32 0.14 gi|31791016 keratin associated protein 21-2 [Homo sapiens] 31 0.24 gi|31791028 keratin associated protein 19-4 [Homo sapiens] 30 0.32 gi|31791024 keratin associated protein 19-6 [Homo sapiens] 30 0.32 gi|22035569 GC-rich sequence DNA-binding factor candidate isofor... 29 0.71 gi|22035565 GC-rich sequence DNA-binding factor candidate isofor... 29 0.71 gi|31791022 keratin associated protein 19-5 [Homo sapiens] 29 0.71 gi|24430141 fibrillin 1 precursor [Homo sapiens] 28 1.2 gi|28466975 keratin associated protein 8-1 [Homo sapiens] 28 1.2 gi|31791030 keratin associated protein 19-1 [Homo sapiens] 28 1.6 >gi|239757562 PREDICTED: similar to Keratin-associated protein 22-2 [Homo sapiens] Length = 45 Score = 108 bits (269), Expect = 1e-24 Identities = 45/45 (100%), Positives = 45/45 (100%) Query: 1 MCYYHNYYGSLDYGCSYGSEYGNSGYACNFPCSYGRFLLAPRKKF 45 MCYYHNYYGSLDYGCSYGSEYGNSGYACNFPCSYGRFLLAPRKKF Sbjct: 1 MCYYHNYYGSLDYGCSYGSEYGNSGYACNFPCSYGRFLLAPRKKF 45 >gi|239752072 PREDICTED: hypothetical protein XP_002348098 [Homo sapiens] Length = 45 Score = 108 bits (269), Expect = 1e-24 Identities = 45/45 (100%), Positives = 45/45 (100%) Query: 1 MCYYHNYYGSLDYGCSYGSEYGNSGYACNFPCSYGRFLLAPRKKF 45 MCYYHNYYGSLDYGCSYGSEYGNSGYACNFPCSYGRFLLAPRKKF Sbjct: 1 MCYYHNYYGSLDYGCSYGSEYGNSGYACNFPCSYGRFLLAPRKKF 45 >gi|239746569 PREDICTED: hypothetical protein XP_002343781 [Homo sapiens] Length = 45 Score = 108 bits (269), Expect = 1e-24 Identities = 45/45 (100%), Positives = 45/45 (100%) Query: 1 MCYYHNYYGSLDYGCSYGSEYGNSGYACNFPCSYGRFLLAPRKKF 45 MCYYHNYYGSLDYGCSYGSEYGNSGYACNFPCSYGRFLLAPRKKF Sbjct: 1 MCYYHNYYGSLDYGCSYGSEYGNSGYACNFPCSYGRFLLAPRKKF 45 >gi|31791014 keratin associated protein 20-2 [Homo sapiens] Length = 65 Score = 45.8 bits (107), Expect = 7e-06 Identities = 23/59 (38%), Positives = 24/59 (40%), Gaps = 22/59 (37%) Query: 1 MCYYHNYYGSLDYG----------------------CSYGSEYGNSGYACNFPCSYGRF 37 MCYY NYYG L YG C YG YG GY C P YGR+ Sbjct: 1 MCYYSNYYGGLRYGYGVLGGGYGCGCGYGHGYGGLGCGYGRGYGGYGYGCCRPSCYGRY 59 >gi|169206147 PREDICTED: hypothetical protein [Homo sapiens] Length = 93 Score = 41.6 bits (96), Expect = 1e-04 Identities = 20/31 (64%), Positives = 21/31 (67%), Gaps = 2/31 (6%) Query: 6 NYYG-SLDYGCSYGSEYGNSGYACNFPCSYG 35 NYYG S YGCSYG YG SGY C + SYG Sbjct: 4 NYYGNSCGYGCSYGCGYG-SGYGCGYGSSYG 33 Score = 32.0 bits (71), Expect = 0.11 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 14/48 (29%) Query: 2 CYYHNYYG---SLDYGCSYGSEYG-----------NSGYACNFPCSYG 35 C Y + YG YGC YG+ Y +GY C + C YG Sbjct: 18 CGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGCGYG 65 Score = 26.6 bits (57), Expect = 4.6 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 6/40 (15%) Query: 2 CYYHNYYGSLDYGCSYGSEYG-----NSGYACNFPCSYGR 36 C Y YG YGC YG+ YG SGY P + R Sbjct: 50 CGYGTGYGC-GYGCGYGTGYGCGCGSGSGYCGYRPFCFRR 88 >gi|239750526 PREDICTED: hypothetical protein [Homo sapiens] Length = 93 Score = 41.6 bits (96), Expect = 1e-04 Identities = 20/31 (64%), Positives = 21/31 (67%), Gaps = 2/31 (6%) Query: 6 NYYG-SLDYGCSYGSEYGNSGYACNFPCSYG 35 NYYG S YGCSYG YG SGY C + SYG Sbjct: 4 NYYGNSCGYGCSYGCGYG-SGYGCGYGSSYG 33 Score = 32.0 bits (71), Expect = 0.11 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 14/48 (29%) Query: 2 CYYHNYYG---SLDYGCSYGSEYG-----------NSGYACNFPCSYG 35 C Y + YG YGC YG+ Y +GY C + C YG Sbjct: 18 CGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGCGYG 65 Score = 26.6 bits (57), Expect = 4.6 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 6/40 (15%) Query: 2 CYYHNYYGSLDYGCSYGSEYG-----NSGYACNFPCSYGR 36 C Y YG YGC YG+ YG SGY P + R Sbjct: 50 CGYGTGYGC-GYGCGYGTGYGCGCGSGSGYCGYRPFCFRR 88 >gi|169205935 PREDICTED: hypothetical protein [Homo sapiens] Length = 123 Score = 41.6 bits (96), Expect = 1e-04 Identities = 20/31 (64%), Positives = 21/31 (67%), Gaps = 2/31 (6%) Query: 6 NYYG-SLDYGCSYGSEYGNSGYACNFPCSYG 35 NYYG S YGCSYG YG SGY C + SYG Sbjct: 34 NYYGNSCGYGCSYGCGYG-SGYGCGYGSSYG 63 Score = 32.0 bits (71), Expect = 0.11 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 14/48 (29%) Query: 2 CYYHNYYG---SLDYGCSYGSEYG-----------NSGYACNFPCSYG 35 C Y + YG YGC YG+ Y +GY C + C YG Sbjct: 48 CGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGCGYG 95 Score = 26.6 bits (57), Expect = 4.6 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 6/40 (15%) Query: 2 CYYHNYYGSLDYGCSYGSEYG-----NSGYACNFPCSYGR 36 C Y YG YGC YG+ YG SGY P + R Sbjct: 80 CGYGTGYGC-GYGCGYGTGYGCGCGSGSGYCGYRPFCFRR 118 >gi|239744833 PREDICTED: hypothetical protein [Homo sapiens] Length = 129 Score = 37.0 bits (84), Expect = 0.003 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 16/46 (34%) Query: 6 NYYGSL-----DYGCSYGSEYG-----------NSGYACNFPCSYG 35 NYYG+ YGC YGS YG +GY+C + C YG Sbjct: 4 NYYGNSCGYGSSYGCGYGSGYGYGYGSSYGCGYGTGYSCGYGCGYG 49 Score = 34.7 bits (78), Expect = 0.017 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Query: 2 CYYHNYYGSLDYGCSYGSEYGNSGYACNFPCSYG 35 C Y Y S YGC YGS YG GY ++ C YG Sbjct: 34 CGYGTGY-SCGYGCGYGSGYG-CGYGSSYGCGYG 65 Score = 32.0 bits (71), Expect = 0.11 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 4/37 (10%) Query: 2 CYYHNYYG---SLDYGCSYGSEYGNSGYACNFPCSYG 35 C Y + YG YGC YG+ Y + GY + C YG Sbjct: 46 CGYGSGYGCGYGSSYGCGYGTGY-SCGYGSGYSCGYG 81 Score = 30.4 bits (67), Expect = 0.32 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 4/31 (12%) Query: 8 YGSLDYGCSYGSEYG---NSGYACNFPCSYG 35 YGS Y C YGS G +G+ C + C YG Sbjct: 72 YGS-GYSCGYGSGSGCGYGTGFGCGYGCGYG 101 >gi|31791020 keratin associated protein 20-1 [Homo sapiens] Length = 56 Score = 35.4 bits (80), Expect = 0.010 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 17/52 (32%) Query: 1 MCYYHNYYGSLDY---GCSYGSEYGNSGYACNF------------PCSYGRF 37 M YY NYYG Y GC YG Y GY C + P YGR+ Sbjct: 1 MIYYSNYYGGYGYGGLGCGYGCGY--RGYGCGYGGYGGYGNGYYCPSCYGRY 50 >gi|149944573 keratin associated protein 19-8 [Homo sapiens] Length = 63 Score = 35.0 bits (79), Expect = 0.013 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 20/57 (35%) Query: 1 MCYYHNYYGSL------------DYGCSYGS--------EYGNSGYACNFPCSYGRF 37 M YY +YYG L YGC YGS YG G++C P YG + Sbjct: 1 MSYYRSYYGGLGYGYGGFGGWGYGYGCGYGSFRRLGYGCGYGGYGFSCCRPLYYGGY 57 >gi|153945796 keratin associated protein 6-3 [Homo sapiens] Length = 110 Score = 35.0 bits (79), Expect = 0.013 Identities = 19/41 (46%), Positives = 19/41 (46%), Gaps = 9/41 (21%) Query: 1 MC--YYHNYYGSLDYGC----SYGSEYGNSGYACNFPCSYG 35 MC YY NY G YGC G YG GY C C YG Sbjct: 8 MCGSYYRNYNGGHGYGCCGYGGLGCGYGGCGYGC---CGYG 45 Score = 27.3 bits (59), Expect = 2.7 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 7/35 (20%) Query: 8 YGSLD-----YGCSYGS--EYGNSGYACNFPCSYG 35 YG LD GC YGS G G C + C YG Sbjct: 51 YGGLDCGYGGLGCGYGSFCGCGYRGLDCGYGCGYG 85 >gi|31791010 keratin associated protein 21-1 [Homo sapiens] Length = 79 Score = 34.3 bits (77), Expect = 0.022 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Query: 2 CYYHNYYGSLDYGCSYGSEYGNSGYACNFPCSYG 35 C Y YG YGC +GS YG GY + C YG Sbjct: 28 CGYGTGYGC-GYGCGFGSHYG-CGYGTGYGCGYG 59 Score = 29.3 bits (64), Expect = 0.71 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%) Query: 14 GCSYGSEYGNSGYACNFPCSYG 35 GC YG+ YG GY C F YG Sbjct: 27 GCGYGTGYG-CGYGCGFGSHYG 47 Score = 26.9 bits (58), Expect = 3.5 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 3/28 (10%) Query: 2 CYYHNYYG---SLDYGCSYGSEYGNSGY 26 C + ++YG YGC YGS G GY Sbjct: 40 CGFGSHYGCGYGTGYGCGYGSGSGYCGY 67 >gi|31791012 keratin associated protein 22-1 [Homo sapiens] Length = 48 Score = 33.9 bits (76), Expect = 0.029 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 5/41 (12%) Query: 1 MCYYHNYYGSLDY-----GCSYGSEYGNSGYACNFPCSYGR 36 M + +NY+G Y GCSYG GYAC P Y R Sbjct: 1 MSFDNNYHGGQGYAKGGLGCSYGCGLSGYGYACYCPWCYER 41 >gi|31791026 keratin associated protein 19-3 [Homo sapiens] Length = 81 Score = 33.1 bits (74), Expect = 0.049 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 2 CYYHNY-YGSLDYGCSYGSEYGNSGYACNFPCSYGRF 37 C Y Y YGS G YGS +G GY C P YG + Sbjct: 39 CGYGGYGYGSGFGGYGYGSGFGGYGYGCYRPSYYGGY 75 Score = 32.3 bits (72), Expect = 0.084 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 5/37 (13%) Query: 1 MCYYHNYYGSLDYGCSYGSEYGNSGYACNFPCSYGRF 37 M YY +YYG L YGC +G GY + C G F Sbjct: 1 MSYYGSYYGGLGYGC---GGFGGLGY--GYGCGCGSF 32 >gi|31791038 keratin associated protein 6-1 [Homo sapiens] Length = 71 Score = 32.7 bits (73), Expect = 0.064 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 4/34 (11%) Query: 1 MC--YYHNYYGSLDYG-CSYGS-EYGNSGYACNF 30 MC YY NYYG+ YG C YG YG G C + Sbjct: 1 MCGSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGY 34 >gi|31791018 keratin associated protein 19-7 [Homo sapiens] Length = 63 Score = 32.7 bits (73), Expect = 0.064 Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 20/57 (35%) Query: 1 MCYYHNYYGSLDYGC--------------------SYGSEYGNSGYACNFPCSYGRF 37 M Y +YYG L YGC YG YG Y+C P YG + Sbjct: 1 MSYSGSYYGGLGYGCGGFGGLGYGYSCGCGSFRRLGYGCGYGGYRYSCCHPSCYGGY 57 >gi|31791040 keratin associated protein 6-2 [Homo sapiens] Length = 62 Score = 32.3 bits (72), Expect = 0.084 Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 6/41 (14%) Query: 1 MC--YYHNYYGSLDYGCS--YGSEYGNSGYACNFP--CSYG 35 MC YY NYYG YGC G YG C + C YG Sbjct: 1 MCGSYYGNYYGDHGYGCCGYEGLGYGYGSLRCGYSSCCGYG 41 >gi|189303554 keratin associated protein 20-3 [Homo sapiens] Length = 44 Score = 31.6 bits (70), Expect = 0.14 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 1 MCYYHNYYGSLDYG--CSYGSEYGNSGYA---CNFPCSYG 35 M YY NYYG L YG C Y G + C + C G Sbjct: 1 MSYYGNYYGGLGYGYDCKYSYTSGFGAFRILDCGYRCGCG 40 >gi|31791016 keratin associated protein 21-2 [Homo sapiens] Length = 83 Score = 30.8 bits (68), Expect = 0.24 Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 19/54 (35%) Query: 1 MC--YYHNY-----YGS-----LDYGCSYGSEYGN-----SGY--ACNFPCSYG 35 MC YY N YGS YGC YG YG+ SGY C + C YG Sbjct: 1 MCCNYYRNCCGGCGYGSGWSSGCGYGCGYGCGYGSGCRYGSGYGTGCGYGCGYG 54 Score = 28.1 bits (61), Expect = 1.6 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 4/33 (12%) Query: 2 CYYHNYYGS-LDYGCSYGSEYGNSGYACNFPCS 33 C Y + YG+ YGC YGS GY C + S Sbjct: 37 CRYGSGYGTGCGYGCGYGS---GCGYGCGYSSS 66 >gi|31791028 keratin associated protein 19-4 [Homo sapiens] Length = 84 Score = 30.4 bits (67), Expect = 0.32 Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 20/57 (35%) Query: 1 MCYYHNYYGSLDYGC--------------------SYGSEYGNSGYACNFPCSYGRF 37 M YY +YY L YGC YG +G +GY P YG + Sbjct: 1 MSYYGSYYRGLGYGCGGFGGLGYGYGCGCGSFRRLGYGCGFGGNGYGYCRPSCYGGY 57 >gi|31791024 keratin associated protein 19-6 [Homo sapiens] Length = 58 Score = 30.4 bits (67), Expect = 0.32 Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 15/46 (32%) Query: 1 MCYYHNYYGSLDYGCS---------------YGSEYGNSGYACNFP 31 M YY +YY L YGC YGS YG Y C P Sbjct: 1 MRYYGSYYRGLGYGCGGFGGLGYGCGCGGYRYGSGYGGYRYGCCRP 46 >gi|22035569 GC-rich sequence DNA-binding factor candidate isoform 2 [Homo sapiens] Length = 815 Score = 29.3 bits (64), Expect = 0.71 Identities = 11/24 (45%), Positives = 14/24 (58%) Query: 3 YYHNYYGSLDYGCSYGSEYGNSGY 26 YY N Y ++ YG SYG Y + Y Sbjct: 337 YYQNTYQTMPYGSSYGIPYSYTAY 360 >gi|22035565 GC-rich sequence DNA-binding factor candidate isoform 1 [Homo sapiens] Length = 917 Score = 29.3 bits (64), Expect = 0.71 Identities = 11/24 (45%), Positives = 14/24 (58%) Query: 3 YYHNYYGSLDYGCSYGSEYGNSGY 26 YY N Y ++ YG SYG Y + Y Sbjct: 337 YYQNTYQTMPYGSSYGIPYSYTAY 360 >gi|31791022 keratin associated protein 19-5 [Homo sapiens] Length = 72 Score = 29.3 bits (64), Expect = 0.71 Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 20/50 (40%) Query: 1 MCYYHNYYGSLDYG--------------------CSYGSEYGNSGYACNF 30 M YY NYYG L YG YG YG GY F Sbjct: 1 MNYYGNYYGGLGYGYGGFDDLGYGYGCGCGSFRRLGYGGGYGGYGYGSGF 50 >gi|24430141 fibrillin 1 precursor [Homo sapiens] Length = 2871 Score = 28.5 bits (62), Expect = 1.2 Identities = 14/35 (40%), Positives = 14/35 (40%) Query: 2 CYYHNYYGSLDYGCSYGSEYGNSGYACNFPCSYGR 36 C N GS CSYG GY C P Y R Sbjct: 2646 CQDINECGSAQAPCSYGCSNTEGGYLCGCPPGYFR 2680 >gi|28466975 keratin associated protein 8-1 [Homo sapiens] Length = 63 Score = 28.5 bits (62), Expect = 1.2 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%) Query: 2 CYYHNYYGSLDY--GCSYGSEYGNSGYACNF 30 CY+ +Y L Y GC YGS Y GY + Sbjct: 14 CYWGSYGYPLGYSVGCGYGSTYSPVGYGFGY 44 >gi|31791030 keratin associated protein 19-1 [Homo sapiens] Length = 90 Score = 28.1 bits (61), Expect = 1.6 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 5/37 (13%) Query: 1 MCYYHNYYGSLDYGCSYGSEYGNSGYACNFPCSYGRF 37 M +Y +YYG L Y C +G GY + C G F Sbjct: 1 MSHYGSYYGGLGYSC---GGFGGLGY--GYGCGCGSF 32 Score = 26.9 bits (58), Expect = 3.5 Identities = 13/30 (43%), Positives = 15/30 (50%) Query: 8 YGSLDYGCSYGSEYGNSGYACNFPCSYGRF 37 YGS G YGS +G GY C P G + Sbjct: 55 YGSGFGGYGYGSGFGGYGYGCCRPSYNGGY 84 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.326 0.146 0.520 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,040,994 Number of Sequences: 37866 Number of extensions: 56071 Number of successful extensions: 327 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 208 Number of HSP's gapped (non-prelim): 56 length of query: 45 length of database: 18,247,518 effective HSP length: 19 effective length of query: 26 effective length of database: 17,528,064 effective search space: 455729664 effective search space used: 455729664 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.