Guide to the Human Genome
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Name: C21orf66 Sequence: fasta or formatted (917aa) NCBI GI: 22035565
Description:

GC-rich sequence DNA-binding factor candidate isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {815aa} GC-rich sequence DNA-binding factor candidate isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         49           2
 C cysteine            0.9          8           1
 D aspartate           6.4         59           3
 E glutamate          10.6         97           4
 F phenylalanine       3.6         33           2
 G glycine             6.1         56           3
 H histidine           1.5         14           1
 I isoleucine          4.7         43           2
 K lysine              8.1         74           2
 L leucine             8.9         82           3
 M methionine          2.1         19           1
 N asparagine          4.8         44           1
 P proline             4.8         44           3
 Q glutamine           4.7         43           2
 R arginine            6.8         62           3
 S serine              8.0         73           2
 T threonine           4.0         37           2
 V valine              4.7         43           2
 W tryptophan          0.9          8           1
 Y tyrosine            3.2         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GC-rich sequence DNA-binding factor candidate isofor... 
C21orf66              0.848   GC-rich sequence DNA-binding factor candidate isofor...
C2orf3                0.219   hypothetical protein LOC6936 
ANKRD11               0.013   ankyrin repeat domain 11 
KHSRP                 0.012   KH-type splicing regulatory protein 
NIN                   0.012   ninein isoform 4 
NIN                   0.012   ninein isoform 5 
NIN                   0.012   ninein isoform 1 
NIN                   0.012   ninein isoform 2 
CCDC88A               0.011   coiled-coil domain containing 88A isoform 1 
MYST3                 0.011   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.011   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.011   MYST histone acetyltransferase (monocytic leukemia)...
HNRNPUL2              0.011   heterogeneous nuclear ribonucleoprotein U-like 2 [H...
SFPQ                  0.010   splicing factor proline/glutamine rich (polypyrimidin...
CCDC88A               0.010   coiled-coil domain containing 88A isoform 2 
GRASP                 0.010   GRP1 (general receptor for phosphoinositides 1)-asso...
RPGR                  0.010   retinitis pigmentosa GTPase regulator isoform C [Hom...
DDX10                 0.010   DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 
SF3B4                 0.010   splicing factor 3b, subunit 4 
RBBP6                 0.010   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.010   retinoblastoma-binding protein 6 isoform 1 
NSBP1                 0.009   nucleosomal binding protein 1 
HTATSF1               0.009   HIV-1 Tat specific factor 1 
HTATSF1               0.009   HIV-1 Tat specific factor 1 
RSF1                  0.009   remodeling and spacing factor 1 
ABCF1                 0.009   ATP-binding cassette, sub-family F, member 1 isoform...
HIRIP3                0.009   HIRA interacting protein 3 
TPR                   0.009   nuclear pore complex-associated protein TPR 
CTR9                  0.009   SH2 domain binding protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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