Guide to the Human Genome
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Name: RANGAP1 Sequence: fasta or formatted (587aa) NCBI GI: 4506411
Description:

Ran GTPase activating protein 1

Referenced in:

Leucine-rich Repeat Family
Ran and Rag

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         68           3
 C cysteine            1.4          8           1
 D aspartate           4.9         29           2
 E glutamate          12.4         73          14
 F phenylalanine       3.9         23           1
 G glycine             6.6         39           3
 H histidine           1.2          7           1
 I isoleucine          3.4         20           1
 K lysine              6.8         40           2
 L leucine            12.6         74           3
 M methionine          2.0         12           1
 N asparagine          4.3         25           2
 P proline             4.1         24           3
 Q glutamine           3.6         21           2
 R arginine            3.4         20           1
 S serine              6.3         37           3
 T threonine           4.6         27           1
 V valine              6.1         36           2
 W tryptophan          0.2          1           1
 Y tyrosine            0.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ran GTPase activating protein 1 
NLRC3                 0.061   NOD3 protein 
MYT1                  0.051   myelin transcription factor 1 
TTBK1                 0.047   tau tubulin kinase 1 
ANP32E                0.046   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
ANP32E                0.045   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
NLRC5                 0.042   nucleotide-binding oligomerization domains 27 [Homo...
MYST4                 0.042   MYST histone acetyltransferase (monocytic leukemia)...
PELP1                 0.038   proline, glutamic acid and leucine rich protein 1 [...
C14orf166B            0.037   hypothetical protein LOC145497 
LOC728792             0.036   PREDICTED: hypothetical protein 
SLC24A1               0.036   solute carrier family 24 (sodium/potassium/calcium ex...
NLRP3                 0.036   NLR family, pyrin domain containing 3 isoform a [Ho...
NLRP3                 0.036   NLR family, pyrin domain containing 3 isoform a [Hom...
DAXX                  0.035   death-domain associated protein isoform a 
DAXX                  0.035   death-domain associated protein isoform a 
DAXX                  0.035   death-domain associated protein isoform b 
ANP32B                0.035   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
DCAF8L2               0.035   DDB1 and CUL4 associated factor 8-like 2 
ANP32E                0.035   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
LRRC68                0.034   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.034   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.034   PREDICTED: leucine rich repeat containing 68 
EHMT2                 0.033   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.033   euchromatic histone-lysine N-methyltransferase 2 is...
RYR1                  0.033   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.033   skeletal muscle ryanodine receptor isoform 1 
YTHDC1                0.033   splicing factor YT521-B isoform 2 
YTHDC1                0.033   splicing factor YT521-B isoform 1 
SHROOM4               0.033   shroom family member 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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