Guide to the Human Genome
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Name: LOC100291911 Sequence: fasta or formatted (771aa) NCBI GI: 239755481
Description:

PREDICTED: similar to Putative uncharacterized protein ENSP00000334305

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         60           2
 C cysteine            3.4         26           2
 D aspartate           3.0         23           2
 E glutamate           7.8         60           4
 F phenylalanine       2.3         18           1
 G glycine             8.9         69           2
 H histidine           4.4         34           1
 I isoleucine          1.7         13           2
 K lysine              4.9         38           2
 L leucine             8.9         69           3
 M methionine          1.8         14           2
 N asparagine          1.9         15           1
 P proline             9.2         71           4
 Q glutamine           5.7         44           1
 R arginine            6.2         48           2
 S serine              6.9         53           2
 T threonine           4.0         31           1
 V valine              6.2         48           2
 W tryptophan          2.5         19           1
 Y tyrosine            2.3         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Putative uncharacterized prot... 
LOC100287484          0.980   PREDICTED: hypothetical protein XP_002343105 
ANKRD33B              0.044   PREDICTED: ankyrin repeat domain 33B 
ANKRD33B              0.044   PREDICTED: ankyrin repeat domain 33B 
FOLH1                 0.026   folate hydrolase 1 isoform 1 
FOLH1                 0.026   folate hydrolase 1 isoform 2 
SPRYD5                0.024   SPRY domain containing 5 
ANKRD33B              0.024   PREDICTED: ankyrin repeat domain 33B 
LOC120824             0.022   PREDICTED: similar to hCG1802386 
LOC120824             0.022   PREDICTED: similar to hCG1802386 
LOC120824             0.022   PREDICTED: similar to hCG1802386 
NAALAD2               0.017   N-acetylated alpha-linked acidic dipeptidase 2 
LOC283116             0.016   PREDICTED: similar to ring finger protein 18 isofor...
LOC283116             0.016   PREDICTED: similar to ring finger protein 18 
LOC653111             0.016   PREDICTED: similar to ring finger protein 18 
LOC283116             0.016   PREDICTED: similar to ring finger protein 18 
TRIM49                0.016   ring finger protein 18 
LOC653192             0.013   PREDICTED: Tripartite motif-containing protein 43-li...
TRIM43                0.013   tripartite motif-containing 43 
LOC283116             0.012   PREDICTED: similar to ring finger protein 18 isofor...
LOC642612             0.011   PREDICTED: similar to tripartite motif protein 39 [...
LOC642612             0.011   PREDICTED: similar to tripartite motif protein 39 [...
LOC729384             0.011   hypothetical protein LOC729384 
LOC100134006          0.011   PREDICTED: similar to ring finger protein 18 isofor...
LOC399939             0.011   PREDICTED: similar to ring finger protein 18 
LOC100131392          0.011   PREDICTED: similar to ring finger protein 18 
LOC399939             0.011   PREDICTED: similar to ring finger protein 18 
LOC100291688          0.011   PREDICTED: hypothetical protein XP_002345241 
TRIM53                0.010   tripartite motif-containing 53 
LOC642425             0.010   tripartite motif-containing 53-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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