Guide to the Human Genome
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Search of human proteins with 239750878

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239750878 PREDICTED: hypothetical protein [Homo sapiens]
         (211 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756352 PREDICTED: hypothetical protein XP_002344902 [Homo ...   442   e-124
gi|239750878 PREDICTED: hypothetical protein [Homo sapiens]           442   e-124
gi|239745238 PREDICTED: hypothetical protein XP_002343415 [Homo ...   442   e-124
gi|195963410 MEF2 activating motif and SAP domain containing tra...    41   6e-04
gi|32698970 MEF2 activating motif and SAP domain containing tran...    41   6e-04
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]          41   6e-04
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]          41   6e-04
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]          41   6e-04
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ...    40   0.001
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ...    40   0.001
gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]            40   0.001
gi|8567388 period 3 [Homo sapiens]                                     39   0.003
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    38   0.007
gi|194272140 dendrin [Homo sapiens]                                    37   0.012
gi|32880208 diaphanous homolog 3 isoform b [Homo sapiens]              37   0.016
gi|110225351 diaphanous homolog 3 isoform a [Homo sapiens]             37   0.016
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi...    35   0.036
gi|98986457 host cell factor 1 [Homo sapiens]                          35   0.036
gi|188536004 zinc finger protein 469 [Homo sapiens]                    35   0.036
gi|52485606 formin-like 2 [Homo sapiens]                               35   0.036
gi|32171215 CREB regulated transcription coactivator 2 [Homo sap...    35   0.036
gi|150170670 piccolo isoform 2 [Homo sapiens]                          35   0.036
gi|150378539 piccolo isoform 1 [Homo sapiens]                          35   0.036
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         35   0.036
gi|167621456 kinase suppressor of ras 2 [Homo sapiens]                 35   0.036
gi|29826341 calmodulin binding transcription activator 2 [Homo s...    35   0.036
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]     35   0.047
gi|21359951 RNA binding motif protein 42 [Homo sapiens]                35   0.047
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo...    35   0.047
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]      35   0.047

>gi|239756352 PREDICTED: hypothetical protein XP_002344902 [Homo
           sapiens]
          Length = 211

 Score =  442 bits (1137), Expect = e-124
 Identities = 211/211 (100%), Positives = 211/211 (100%)

Query: 1   MQTWESLLLPPSCSSRRQWLLPDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGS 60
           MQTWESLLLPPSCSSRRQWLLPDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGS
Sbjct: 1   MQTWESLLLPPSCSSRRQWLLPDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGS 60

Query: 61  AQAPSPSAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAE 120
           AQAPSPSAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAE
Sbjct: 61  AQAPSPSAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAE 120

Query: 121 RTAMFLALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPS 180
           RTAMFLALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPS
Sbjct: 121 RTAMFLALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPS 180

Query: 181 SCLPMCSLVPSPLGTGPSLWLLLCNYQKTLW 211
           SCLPMCSLVPSPLGTGPSLWLLLCNYQKTLW
Sbjct: 181 SCLPMCSLVPSPLGTGPSLWLLLCNYQKTLW 211


>gi|239750878 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 211

 Score =  442 bits (1137), Expect = e-124
 Identities = 211/211 (100%), Positives = 211/211 (100%)

Query: 1   MQTWESLLLPPSCSSRRQWLLPDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGS 60
           MQTWESLLLPPSCSSRRQWLLPDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGS
Sbjct: 1   MQTWESLLLPPSCSSRRQWLLPDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGS 60

Query: 61  AQAPSPSAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAE 120
           AQAPSPSAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAE
Sbjct: 61  AQAPSPSAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAE 120

Query: 121 RTAMFLALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPS 180
           RTAMFLALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPS
Sbjct: 121 RTAMFLALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPS 180

Query: 181 SCLPMCSLVPSPLGTGPSLWLLLCNYQKTLW 211
           SCLPMCSLVPSPLGTGPSLWLLLCNYQKTLW
Sbjct: 181 SCLPMCSLVPSPLGTGPSLWLLLCNYQKTLW 211


>gi|239745238 PREDICTED: hypothetical protein XP_002343415 [Homo
           sapiens]
          Length = 211

 Score =  442 bits (1137), Expect = e-124
 Identities = 211/211 (100%), Positives = 211/211 (100%)

Query: 1   MQTWESLLLPPSCSSRRQWLLPDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGS 60
           MQTWESLLLPPSCSSRRQWLLPDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGS
Sbjct: 1   MQTWESLLLPPSCSSRRQWLLPDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGS 60

Query: 61  AQAPSPSAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAE 120
           AQAPSPSAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAE
Sbjct: 61  AQAPSPSAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAE 120

Query: 121 RTAMFLALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPS 180
           RTAMFLALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPS
Sbjct: 121 RTAMFLALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPS 180

Query: 181 SCLPMCSLVPSPLGTGPSLWLLLCNYQKTLW 211
           SCLPMCSLVPSPLGTGPSLWLLLCNYQKTLW
Sbjct: 181 SCLPMCSLVPSPLGTGPSLWLLLCNYQKTLW 211


>gi|195963410 MEF2 activating motif and SAP domain containing
           transcriptional regulator isoform 1 [Homo sapiens]
          Length = 415

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 52/195 (26%), Positives = 71/195 (36%), Gaps = 48/195 (24%)

Query: 22  PDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGSAQAPSPS-APSCPPAITVGYG 80
           P P  +   +     Q         +  P PRAA+ PG+A AP+P+ AP+  PA+T   G
Sbjct: 224 PWPRLKPKALAAARRQGSVKPSAASHRPPLPRAADTPGTAPAPTPTPAPAAAPALTPSSG 283

Query: 81  AQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAERTAMFLALASFSVLL----- 135
                             P    L L         L+ A R A  L       +L     
Sbjct: 284 ------------------PGSAALTLE------EELQEAIRRAQLLPNRGIDDILEDQVE 319

Query: 136 -----------VPGTAILMSHAQTPQTGNGGISS--SSVPPSPISQVSPASPPPPLPSSC 182
                       PG+  ++S    P   + G+SS  SS  PSP +  SP+   P      
Sbjct: 320 PDDPLPPIPLDFPGSFDVLS----PSPDSEGLSSVFSSSLPSPTNSSSPSPRDPTDSLDW 375

Query: 183 LPMCSLVPSPLGTGP 197
           L   S  P PLG+GP
Sbjct: 376 LEALSGGP-PLGSGP 389


>gi|32698970 MEF2 activating motif and SAP domain containing
           transcriptional regulator isoform 2 [Homo sapiens]
          Length = 312

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 52/195 (26%), Positives = 71/195 (36%), Gaps = 48/195 (24%)

Query: 22  PDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGSAQAPSPS-APSCPPAITVGYG 80
           P P  +   +     Q         +  P PRAA+ PG+A AP+P+ AP+  PA+T   G
Sbjct: 121 PWPRLKPKALAAARRQGSVKPSAASHRPPLPRAADTPGTAPAPTPTPAPAAAPALTPSSG 180

Query: 81  AQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAERTAMFLALASFSVLL----- 135
                             P    L L         L+ A R A  L       +L     
Sbjct: 181 ------------------PGSAALTLE------EELQEAIRRAQLLPNRGIDDILEDQVE 216

Query: 136 -----------VPGTAILMSHAQTPQTGNGGISS--SSVPPSPISQVSPASPPPPLPSSC 182
                       PG+  ++S    P   + G+SS  SS  PSP +  SP+   P      
Sbjct: 217 PDDPLPPIPLDFPGSFDVLS----PSPDSEGLSSVFSSSLPSPTNSSSPSPRDPTDSLDW 272

Query: 183 LPMCSLVPSPLGTGP 197
           L   S  P PLG+GP
Sbjct: 273 LEALSGGP-PLGSGP 286


>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
          Length = 1012

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 51/193 (26%), Positives = 68/193 (35%), Gaps = 38/193 (19%)

Query: 14  SSRRQWLLPDPPFRDSP--MTPLGHQSGFSKRVQENGEPFPRAANLPG-----SAQAPS- 65
           S+++Q L   PP   +P  +TP    +           P P A  +P      ++QAP+ 
Sbjct: 174 SAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQ 233

Query: 66  PSAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAERTAMF 125
           P AP+ P   T    A   H +R    H      P P L    G AG  +  S       
Sbjct: 234 PQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPS------- 286

Query: 126 LALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPSSCLPM 185
                              HAQ P  G G     S+   P+ Q     P PP P    P 
Sbjct: 287 -------------------HAQPPLHGQGPPGPHSLQAGPLLQ----HPGPPQPFGLPPQ 323

Query: 186 CSLVPSPLGTGPS 198
            S   +PLGT P+
Sbjct: 324 ASQGQAPLGTSPA 336


>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 51/193 (26%), Positives = 68/193 (35%), Gaps = 38/193 (19%)

Query: 14  SSRRQWLLPDPPFRDSP--MTPLGHQSGFSKRVQENGEPFPRAANLPG-----SAQAPS- 65
           S+++Q L   PP   +P  +TP    +           P P A  +P      ++QAP+ 
Sbjct: 728 SAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQ 787

Query: 66  PSAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAERTAMF 125
           P AP+ P   T    A   H +R    H      P P L    G AG  +  S       
Sbjct: 788 PQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPS------- 840

Query: 126 LALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPSSCLPM 185
                              HAQ P  G G     S+   P+ Q     P PP P    P 
Sbjct: 841 -------------------HAQPPLHGQGPPGPHSLQAGPLLQ----HPGPPQPFGLPPQ 877

Query: 186 CSLVPSPLGTGPS 198
            S   +PLGT P+
Sbjct: 878 ASQGQAPLGTSPA 890


>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 51/193 (26%), Positives = 68/193 (35%), Gaps = 38/193 (19%)

Query: 14  SSRRQWLLPDPPFRDSP--MTPLGHQSGFSKRVQENGEPFPRAANLPG-----SAQAPS- 65
           S+++Q L   PP   +P  +TP    +           P P A  +P      ++QAP+ 
Sbjct: 728 SAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQ 787

Query: 66  PSAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAERTAMF 125
           P AP+ P   T    A   H +R    H      P P L    G AG  +  S       
Sbjct: 788 PQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPS------- 840

Query: 126 LALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPSSCLPM 185
                              HAQ P  G G     S+   P+ Q     P PP P    P 
Sbjct: 841 -------------------HAQPPLHGQGPPGPHSLQAGPLLQ----HPGPPQPFGLPPQ 877

Query: 186 CSLVPSPLGTGPS 198
            S   +PLGT P+
Sbjct: 878 ASQGQAPLGTSPA 890


>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
           (predicted) [Homo sapiens]
          Length = 290

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 39/209 (18%)

Query: 10  PPSCSSRRQWLL---PDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGSAQAPSP 66
           P + S+   WLL   P+     +P T    ++G  +R +E GE    A++  GS + P+P
Sbjct: 68  PGTASAPPAWLLLVSPEHGLAPAPTTIRDPEAGHQERPEEEGEDEAEASS--GSEEEPAP 125

Query: 67  SAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAERTAMFL 126
           S+      +  G  A     RR   L +L         G+ +  AG R   S  +     
Sbjct: 126 SS------LQPGSPASPGPGRRLCSLDVLR--------GVRLELAGARRRLSEGK----- 166

Query: 127 ALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPSSCLP-- 184
            L S    L+ G     + +  P       S+S   P+P    +PASPP P  +  +P  
Sbjct: 167 -LVSRPRALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPPL 225

Query: 185 -------MCSLVPSP-----LGTGPSLWL 201
                     ++P+P        GP +W+
Sbjct: 226 RSHKPTVAVRILPAPPRPPISSPGPIIWV 254


>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
           (predicted) [Homo sapiens]
          Length = 290

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 39/209 (18%)

Query: 10  PPSCSSRRQWLL---PDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGSAQAPSP 66
           P + S+   WLL   P+     +P T    ++G  +R +E GE    A++  GS + P+P
Sbjct: 68  PGTASAPPAWLLLVSPEHGLAPAPTTIRDPEAGHQERPEEEGEDEAEASS--GSEEEPAP 125

Query: 67  SAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAERTAMFL 126
           S+      +  G  A     RR   L +L         G+ +  AG R   S  +     
Sbjct: 126 SS------LQPGSPASPGPGRRLCSLDVLR--------GVRLELAGARRRLSEGK----- 166

Query: 127 ALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPSSCLP-- 184
            L S    L+ G     + +  P       S+S   P+P    +PASPP P  +  +P  
Sbjct: 167 -LVSRPRALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPPL 225

Query: 185 -------MCSLVPSP-----LGTGPSLWL 201
                     ++P+P        GP +W+
Sbjct: 226 RSHKPTVAVRILPAPPRPPISSPGPIIWV 254


>gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 290

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 39/209 (18%)

Query: 10  PPSCSSRRQWLL---PDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGSAQAPSP 66
           P + S+   WLL   P+     +P T    ++G  +R +E GE    A++  GS + P+P
Sbjct: 68  PGTASAPPAWLLLVSPEHGLAPAPTTIRDPEAGHQERPEEEGEDEAEASS--GSEEEPAP 125

Query: 67  SAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAERTAMFL 126
           S+      +  G  A     RR   L +L         G+ +  AG R   S  +     
Sbjct: 126 SS------LQPGSPASPGPGRRLCSLDVLR--------GVRLELAGARRRLSEGK----- 166

Query: 127 ALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPSSCLP-- 184
            L S    L+ G     + +  P       S+S   P+P    +PASPP P  +  +P  
Sbjct: 167 -LVSRPRALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPPL 225

Query: 185 -------MCSLVPSP-----LGTGPSLWL 201
                     ++P+P        GP +W+
Sbjct: 226 RSHKPTVAVRILPAPPRPPISSPGPIIWV 254


>gi|8567388 period 3 [Homo sapiens]
          Length = 1201

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 23/170 (13%)

Query: 21  LPDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGSAQAPSPSAPSCPPAITVGYG 80
           LP+PP   S  T  G + G      +N +P       P +A +P  S+P+ PPA  V   
Sbjct: 744 LPEPPDSSSSNTGSGPRRG----AHQNAQPC-----CPSAASSPHTSSPTFPPAAMVP-- 792

Query: 81  AQGSHERRSFYLHLLHFRPPGPTLGLAVGWA--GGRALESAERTAMFLA-----LASFSV 133
           +Q  +   +F L       PG     A G A  G   L  +E    + A     L +F  
Sbjct: 793 SQAPYLVPAFPLPAA--TSPGREYA-APGTAPEGLHGLPLSEGLQPYPAFPFPYLDTFMT 849

Query: 134 LLVPGTAI--LMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPSS 181
           + +P   +  L+S +  P    G  +SS++ PS  S +SP   PPP  +S
Sbjct: 850 VFLPDPPVCPLLSPSFLPCPFLGATASSAISPSMSSAMSPTLDPPPSVTS 899


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
          Length = 2161

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 43/174 (24%), Positives = 67/174 (38%), Gaps = 42/174 (24%)

Query: 9    LPPSCSSRRQWLLPDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGSAQAPSPSA 68
            LPP  +S   ++    P R       G +    K+ +  GEP  +   LP +    SP++
Sbjct: 1087 LPPRAASAAMYV----PARSGR----GRKGPLVKQTKVEGEP-QKGGGLPPAPSPTSPAS 1137

Query: 69   PSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAERTAMFLAL 128
            P  PPA+          E+ S  +  +  + P  +       + GR+ + +   A     
Sbjct: 1138 PQPPPAVAA------PSEKNSIPIPTIIIKAPSTS-------SSGRSSQGSSTEAE---- 1180

Query: 129  ASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSP-ISQVSPASPPPPLPSS 181
                    P T       Q   TG GG   SS  P+P +S V P+  P P P+S
Sbjct: 1181 --------PPT-------QPEPTGGGGGGGSSPSPAPAMSPVPPSPSPVPTPAS 1219



 Score = 33.1 bits (74), Expect = 0.18
 Identities = 41/123 (33%), Positives = 51/123 (41%), Gaps = 43/123 (34%)

Query: 81  AQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAERTAMFLALASFSV---LLVP 137
           AQ S+ER SF        PPGP L L       +++ +AE    +LA  +      L VP
Sbjct: 868 AQPSYERPSFL-------PPGPGLMLRQ-----KSIGAAEDDRPYLAPPAMKFSRSLSVP 915

Query: 138 GTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPP---PPLPSSCLPMCSLVPSPLG 194
           G                   S  +PP P +  SP  PP   PP+PSS      L PSP G
Sbjct: 916 G-------------------SEDIPPPPTT--SPPEPPYSTPPVPSS---SGRLTPSPRG 951

Query: 195 TGP 197
            GP
Sbjct: 952 -GP 953



 Score = 29.3 bits (64), Expect = 2.6
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 16/87 (18%)

Query: 100  PGPTLGLAVGWAGGRALESAERTAMFLALASFSVLLVP--------GTAILMSHAQ-TPQ 150
            P P+   + G  GG +   A R       A+ + + VP        G  +  +  +  PQ
Sbjct: 1062 PSPSHHGSAGGGGGSSQGPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQ 1121

Query: 151  TGNGGISSSSVPPSPISQVSPASPPPP 177
             G G      +PP+P S  SPASP PP
Sbjct: 1122 KGGG------LPPAP-SPTSPASPQPP 1141


>gi|194272140 dendrin [Homo sapiens]
          Length = 711

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 30/167 (17%)

Query: 16  RRQWLLPDP----PFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGSAQAPSPSAPSC 71
           RR+W  P P    P  + P   LG + G                  PG++Q P+ SAP+ 
Sbjct: 218 RRRWDRPPPYVAPPSYEGPHRTLGTKRG------------------PGNSQVPTSSAPAA 259

Query: 72  PPAITVGYGAQGSHERRSF--YLHLLHFRPPGPTLGLAVGWAGGRALESAERTAMFLALA 129
            PA T G   +   + R +   L     R     LG + G    RA     +  +  +L 
Sbjct: 260 TPARTDGGRTKKRLDPRIYRDVLGAWGLRQGQGLLGGSPGCGAARARPEPGKGVVEKSLG 319

Query: 130 SFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPP 176
             +  L  G+    SH Q   TG+ G   + + P+  +  +P +P P
Sbjct: 320 LAAADLNSGSD---SHPQAKATGSAG---TEIAPAGSATAAPCAPHP 360


>gi|32880208 diaphanous homolog 3 isoform b [Homo sapiens]
          Length = 849

 Score = 36.6 bits (83), Expect = 0.016
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 7/51 (13%)

Query: 149 PQTGNGGISSSSVPPSP-------ISQVSPASPPPPLPSSCLPMCSLVPSP 192
           P +  GG   S++PP P       +    P  PPPPLP   +P    VP P
Sbjct: 300 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPVPPP 350


>gi|110225351 diaphanous homolog 3 isoform a [Homo sapiens]
          Length = 1193

 Score = 36.6 bits (83), Expect = 0.016
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 7/51 (13%)

Query: 149 PQTGNGGISSSSVPPSP-------ISQVSPASPPPPLPSSCLPMCSLVPSP 192
           P +  GG   S++PP P       +    P  PPPPLP   +P    VP P
Sbjct: 563 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPVPPP 613


>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
           sapiens]
          Length = 729

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 11/108 (10%)

Query: 91  YLHLLHFRPPGPTLGLAVGWAGGRALESAERTAMFLALASFSVLLVPGTAILMSHAQTPQ 150
           +L ++  R  G    LA   A G++     ++ +  A A  +    PGT         PQ
Sbjct: 271 FLEMMEARSRGHASPLA---ANGQSPSPGSQSPVVPAGAVSTGSSSPGTP-----QPAPQ 322

Query: 151 TGNGGISSSSVPPSPISQVSPASPPPPLPSSCLPMCSLVPSPLGTGPS 198
                   SSVPP P S+   A PPP  PS+  P  S++    GT P+
Sbjct: 323 LPLNAAPPSSVPPVPPSE---ALPPPACPSAPAPRRSIISRLFGTSPA 367


>gi|98986457 host cell factor 1 [Homo sapiens]
          Length = 2035

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 9/104 (8%)

Query: 103 TLGLAVGWAGGRALESAERTAMFL--ALASFSVLLVPGTAILMSHAQTPQTGNGGISSSS 160
           T+  ++  AGG +  ++  T +     +A+ S  ++  TAI +S AQT  T  GG+++ +
Sbjct: 889 TVSTSLAGAGGHSTSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPT 948

Query: 161 VPPSPISQ------VSPASPPPPLPSSCLPMCSLVPSPLGTGPS 198
           +   P+SQ      ++  S     P   LP+ S++ SP    P+
Sbjct: 949 ITMQPVSQPTQVTLITAPSGVEAQPVHDLPV-SILASPTTEQPT 991


>gi|188536004 zinc finger protein 469 [Homo sapiens]
          Length = 3925

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 55/202 (27%), Positives = 79/202 (39%), Gaps = 30/202 (14%)

Query: 10  PPSCSSRRQWLLPDPPFRDSPMTPLGHQSGFSKRVQENGEPFP-RAANLPGSAQAPSPSA 68
           PP     + W   DP     P TP G     ++ +  NG+P P +   LP SA  P P  
Sbjct: 432 PPPARLPQLW---DPTAAPYP-TPPGGPLAATRSMFFNGQPSPGQRLCLPQSAPLPWPQV 487

Query: 69  PSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGP--------TLGLAVGWAGGRALESAE 120
              P A    +G +         L  L F   GP         LG A    G R    A 
Sbjct: 488 --LPTARPSPHGME--------MLSRLPFPAGGPEWQGGSQGALGTAGKTPGPREKLPAV 537

Query: 121 RTAM--FLALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPL 178
           R++     AL +++ +  PG   L      PQ    G  + S+PP  +   SP+  P P 
Sbjct: 538 RSSQGGSPALFTYNGMTDPGAQPLFFGVAQPQVSPHG--TPSLPPPRVVGASPSESPLPS 595

Query: 179 P--SSCLPMCSLVPSPLGTGPS 198
           P  ++    CS + SP+ + P+
Sbjct: 596 PATNTAGSTCSSL-SPMSSSPA 616


>gi|52485606 formin-like 2 [Homo sapiens]
          Length = 1092

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 129 ASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPSSCL--PMC 186
           A+ S  L P    L   + TP+T   G  +  +PP P     P  PPPP P   L  P  
Sbjct: 520 AASSGPLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPPLPGPAA 579

Query: 187 SLVPSP 192
             VP+P
Sbjct: 580 ETVPAP 585


>gi|32171215 CREB regulated transcription coactivator 2 [Homo
           sapiens]
          Length = 693

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 44/158 (27%), Positives = 61/158 (38%), Gaps = 17/158 (10%)

Query: 52  PRAANLPGSAQAPSPSAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPT-----LGL 106
           PR+  +PG    PSP  P+  P +       GS       L  LHF PP PT        
Sbjct: 242 PRSCEVPGINIFPSPDQPANVPVLPPAMNTGGSLPD----LTNLHFPPPLPTPLDPEETA 297

Query: 107 AVGWAGGRALESAERTAMFLALASFSVL----LVPGTAILMSHAQTPQT-GNGGISSSSV 161
               +GG +  +   T   L ++    L      PG    +SH     +  N  + +S  
Sbjct: 298 YPSLSGGNSTSNLTHTMTHLGISRGMGLGPGYDAPGLHSPLSHPSLQSSLSNPNLQASLS 357

Query: 162 PPSPISQVSPASPPPPLPSSCLPMCSLVPSPLGTGPSL 199
            P P  Q+  +   P LP+S L    L  + LG  PSL
Sbjct: 358 SPQP--QLQGSHSHPSLPASSLARHVLPTTSLG-HPSL 392


>gi|150170670 piccolo isoform 2 [Homo sapiens]
          Length = 4935

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 49/196 (25%), Positives = 64/196 (32%), Gaps = 33/196 (16%)

Query: 30  PMTPLGHQSGFSKRVQENGEPFPRAANLPGSAQAPS-PSAPSCPPAITVGYGAQGSHERR 88
           P  P    SG +K + +           PG+ + P+ P  P+ PPA   G     S +  
Sbjct: 328 PAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPG 387

Query: 89  SFYLHLLHFRPPGPTLGLAVGWAGGRALESAERTAMFLALASFSVLLVPGTAILMSHAQT 148
              L     +PPG  +G       G A    ++      LA    L  P  A   +    
Sbjct: 388 PKALA----QPPG--VGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPV 441

Query: 149 PQTGNGGISSSSV--------------PPS--------PISQVSPASPPPPLPSSCLPMC 186
            Q G G I +                 PPS        P  Q  PA PPP  P S  P  
Sbjct: 442 QQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPS 501

Query: 187 ----SLVPSPLGTGPS 198
               S  P P   GP+
Sbjct: 502 QQPGSTKPPPQQPGPA 517



 Score = 29.6 bits (65), Expect = 2.0
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 162  PPSPISQVSPASPPPPLPSSCLPMCSLVP 190
            PP P     P  PPPPLP    P  +++P
Sbjct: 2411 PPPPPPPPPPPPPPPPLPPPTSPKPTILP 2439



 Score = 28.1 bits (61), Expect = 5.7
 Identities = 15/38 (39%), Positives = 17/38 (44%)

Query: 156  ISSSSVPPSPISQVSPASPPPPLPSSCLPMCSLVPSPL 193
            IS+   PP P     P  PPPP P    P  S  P+ L
Sbjct: 2401 ISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTIL 2438


>gi|150378539 piccolo isoform 1 [Homo sapiens]
          Length = 5142

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 49/196 (25%), Positives = 64/196 (32%), Gaps = 33/196 (16%)

Query: 30  PMTPLGHQSGFSKRVQENGEPFPRAANLPGSAQAPS-PSAPSCPPAITVGYGAQGSHERR 88
           P  P    SG +K + +           PG+ + P+ P  P+ PPA   G     S +  
Sbjct: 328 PAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPG 387

Query: 89  SFYLHLLHFRPPGPTLGLAVGWAGGRALESAERTAMFLALASFSVLLVPGTAILMSHAQT 148
              L     +PPG  +G       G A    ++      LA    L  P  A   +    
Sbjct: 388 PKALA----QPPG--VGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPV 441

Query: 149 PQTGNGGISSSSV--------------PPS--------PISQVSPASPPPPLPSSCLPMC 186
            Q G G I +                 PPS        P  Q  PA PPP  P S  P  
Sbjct: 442 QQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPS 501

Query: 187 ----SLVPSPLGTGPS 198
               S  P P   GP+
Sbjct: 502 QQPGSTKPPPQQPGPA 517



 Score = 29.6 bits (65), Expect = 2.0
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 162  PPSPISQVSPASPPPPLPSSCLPMCSLVP 190
            PP P     P  PPPPLP    P  +++P
Sbjct: 2411 PPPPPPPPPPPPPPPPLPPPTSPKPTILP 2439



 Score = 28.1 bits (61), Expect = 5.7
 Identities = 15/38 (39%), Positives = 17/38 (44%)

Query: 156  ISSSSVPPSPISQVSPASPPPPLPSSCLPMCSLVPSPL 193
            IS+   PP P     P  PPPP P    P  S  P+ L
Sbjct: 2401 ISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTIL 2438


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 57/208 (27%), Positives = 80/208 (38%), Gaps = 35/208 (16%)

Query: 17   RQWLLPDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLP----GSAQAPSPSAPSCP 72
            R  L P PP   +P  P    SG    +  N  P      LP    G+A+AP P+     
Sbjct: 1318 RDGLTPVPPLAPAPRPP---SSGLPAVL--NPRPTLTPGRLPTPTLGTARAPMPTPTLVR 1372

Query: 73   PAIT--------VGYGAQGSHERR-SFYLHLLHFRPPGPTLGLAVGWAGGRALESAERTA 123
            P +         V   A G+     S  LH+    P   +  + +       L S   + 
Sbjct: 1373 PLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLPGPASSPMPI--PNSSPLASPVSST 1430

Query: 124  MFLALASFSVLLVPGTAILMSHAQTPQT----------GNGGISSSSVPPSPISQVSPAS 173
            + + L+S   + VP T  L + A  P T           +G    +SV P P++ V PA+
Sbjct: 1431 VSVPLSSSLPISVPTT--LPAPASAPLTIPISAPLTVSASGPALLTSVTP-PLAPVVPAA 1487

Query: 174  PPPP--LPSSCLPMCSLVPSPLGTGPSL 199
            P PP   PS   P  S +   L T PSL
Sbjct: 1488 PGPPSLAPSGASPSASALTLGLATAPSL 1515



 Score = 32.7 bits (73), Expect = 0.23
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 10/66 (15%)

Query: 137  PGTAILMSHAQTP-------QTGNGGISSSSVPPSPISQVSPASPPPPLPSSCLPMCSLV 189
            PG A +++ +QTP        T    ++S+S  P+P   ++P+S    LP+   P+ S +
Sbjct: 1616 PGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPA---PVPSPL 1672

Query: 190  PSPLGT 195
            PSP  T
Sbjct: 1673 PSPAST 1678



 Score = 30.0 bits (66), Expect = 1.5
 Identities = 42/159 (26%), Positives = 57/159 (35%), Gaps = 7/159 (4%)

Query: 50   PFPRAANLPGSAQAPSP-SAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPPGPTLGLAV 108
            P P AA +  S+Q P P  APS  P  ++   +                  P P      
Sbjct: 1614 PSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLP 1673

Query: 109  GWAGGRALESAERTAMFLALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPSPISQ 168
              A  + L  A   A  L  +S S  L  GT         P        +SS+ P+P   
Sbjct: 1674 SPASTQTLALAPALAPTLGGSSPSQTLSLGTG--NPQGPFPTQTLSLTPASSLVPTPAQT 1731

Query: 169  VSPASPPPPLPSSCLPMCSLVP----SPLGTGPSLWLLL 203
            +S A  PP  P+  L +    P    SP+G  P+  L L
Sbjct: 1732 LSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTL 1770



 Score = 27.7 bits (60), Expect = 7.4
 Identities = 45/174 (25%), Positives = 66/174 (37%), Gaps = 12/174 (6%)

Query: 21   LPDPPFRDSPMTPLGHQSGFSKRVQENGEPFPRAANLPGSAQAPSPSAPSCPPAITVGYG 80
            LP P    SPM P+ + S  +  V       P +++LP S     P+  S P  I +   
Sbjct: 1407 LPGPA--SSPM-PIPNSSPLASPVSSTVS-VPLSSSLPISVPTTLPAPASAPLTIPISAP 1462

Query: 81   AQGSHERRSFYLHLLHFRPP-GPTLGLAVG---WAGGRALESAERTAMFLALA-SFSVLL 135
               S    +    L    PP  P +  A G    A   A  SA    + LA A S S   
Sbjct: 1463 LTVSASGPAL---LTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQ 1519

Query: 136  VPGTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPASPPPPLPSSCLPMCSLV 189
             PG  +L++   +   G     + +  P  +   + ASP P  P+      SL+
Sbjct: 1520 TPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASLL 1573


>gi|167621456 kinase suppressor of ras 2 [Homo sapiens]
          Length = 921

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 17/34 (50%), Positives = 20/34 (58%)

Query: 159 SSVPPSPISQVSPASPPPPLPSSCLPMCSLVPSP 192
           SS  PS  +  +P+SP PPLP S  P   L PSP
Sbjct: 488 SSSNPSSTTSSTPSSPAPPLPPSATPPSPLHPSP 521


>gi|29826341 calmodulin binding transcription activator 2 [Homo
           sapiens]
          Length = 1202

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 9/73 (12%)

Query: 146 AQTPQTGNGGISSSSV-------PPSPISQVSPASPPP-PLPSSCLPMCSLVPSPLGTG- 196
           + +P TG   +SS S          S  S     SPPP PLP+S + M  + P  L +G 
Sbjct: 829 SSSPDTGLSSVSSPSELSDGTFSVTSAYSSAPDGSPPPAPLPASEMTMEDMAPGQLSSGV 888

Query: 197 PSLWLLLCNYQKT 209
           P   LLL +Y+ T
Sbjct: 889 PEAPLLLMDYEAT 901


>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
          Length = 3664

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 40/155 (25%), Positives = 55/155 (35%), Gaps = 12/155 (7%)

Query: 49   EPFPRAANLPGSAQAPSPSAPSCPPAITVGYGAQGSH-ERR------SFYLHLLHFRPPG 101
            +P   AA  P +  AP+P+    P  + +   A   H E R      S  L  L   PP 
Sbjct: 3228 QPGKEAAKTPDAKAAPTPTPAPVPVPVPLPAPAPAPHGEARILTVTPSNQLQGLPLTPPV 3287

Query: 102  P-TLGLAVGWAGGRALESAE----RTAMFLALASFSVLLVPGTAILMSHAQTPQTGNGGI 156
              T G+ +  + G   +       RT    A  + +      +  L S  +T   G    
Sbjct: 3288 VVTHGVQIVHSSGELFQEYRYGDIRTYHPPAQLTHTQFPAASSVGLPSRTKTAAQGPPPE 3347

Query: 157  SSSSVPPSPISQVSPASPPPPLPSSCLPMCSLVPS 191
                 PP P+    PA P PP P S L      PS
Sbjct: 3348 GEPLQPPQPVQSTQPAQPAPPCPPSQLGQPGQPPS 3382


>gi|21359951 RNA binding motif protein 42 [Homo sapiens]
          Length = 480

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 43/157 (27%), Positives = 59/157 (37%), Gaps = 20/157 (12%)

Query: 52  PRAANLPGSAQAPSPSAPSCPPAITVGYGAQGSHERRSFYLHLLHFRPP---GPTLGLAV 108
           P    +P       P+AP   P I      Q      +         PP   GP     V
Sbjct: 64  PTVPTVPTVEAMQVPAAPVIRPIIATNTYQQVQQTLEARAAAAATVVPPMVGGPPFVGPV 123

Query: 109 GWAGGRA--LESAE-RTAMFLALASFSVLLVPGTAILMSHAQTP---QTGNGGISSSSVP 162
           G+  G    L+S E R AMFL  A+    + P  A ++  A  P   Q  +  +SS++  
Sbjct: 124 GFGPGDRSHLDSPEAREAMFLRRAA----VAPQRAPILRPAFVPHVLQRADSALSSAAAG 179

Query: 163 PSPISQ-------VSPASPPPPLPSSCLPMCSLVPSP 192
           P P++        V P  P PP P   LP  +  P P
Sbjct: 180 PRPMALRPPHQALVGPPLPGPPGPPMMLPPMARAPGP 216


>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
           sapiens]
          Length = 483

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 149 PQTGNGGISSSSVPPSPISQVSPASPPPPLP--SSCLPMCSLVPSPL 193
           P  G  G+ +    P+  +Q  PA PPPPLP  +SC P  SL   PL
Sbjct: 268 PPCGYPGLKAEPASPAQDAQEPPA-PPPPLPPYASCSPRASLPAPPL 313



 Score = 33.1 bits (74), Expect = 0.18
 Identities = 53/184 (28%), Positives = 71/184 (38%), Gaps = 16/184 (8%)

Query: 21  LPDPPFRDSPM-TPLGHQSG--FSKRVQENGEPFPRAANLPGSAQAPSPSAPSCPPAITV 77
           LP P    SP+ TPL    G      +     P P A   P     P P+ P  PPA  +
Sbjct: 186 LPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAP--PPPPPPPPPTPPPLPPASVL 243

Query: 78  GYGAQGSHERRSFYLHLLHFRPPGPTLGLAVGWAGGRALESAERTAMFLALASFSVLLVP 137
              A    + +   LHL    PP P L    G+ G +A  ++         A    L  P
Sbjct: 244 SDKAV---KPQLAPLHLPPIPPPLPLLP-PCGYPGLKAEPASPAQDAQEPPAPPPPL--P 297

Query: 138 GTAILMSHAQTPQTGNGGISSSSVPPSPISQVSPA--SPPPPLPSSCLPMCSLVPSPLGT 195
             A     A  P     G++SSS  P P+   SP+  +PP    +  LP     P+P G+
Sbjct: 298 PYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALP---APPAPPGS 354

Query: 196 GPSL 199
            P L
Sbjct: 355 QPFL 358



 Score = 28.5 bits (62), Expect = 4.4
 Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 162 PPSPISQVSPASPPPPLPSSCLPMCSLV--PSPLGTG 196
           PP P     P   PPPLPSS      LV  P PL  G
Sbjct: 174 PPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKG 210


>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
          Length = 1349

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 54/210 (25%), Positives = 74/210 (35%), Gaps = 39/210 (18%)

Query: 21   LPDPP---FRDSPMTPLGHQSGFSKRVQENGEP---FPRAANLPGSAQAPSPSA------ 68
            +P PP   ++D PM PL  Q       Q  G P   +P  A  PG+   PS         
Sbjct: 1113 VPAPPAAKWQDRPMQPLVSQGQLRHTSQGMGIPVLPYPEPAE-PGAHGGPSTFGLDTRWY 1171

Query: 69   ---PSCPPAITVGYGAQGSHERRSFYLHLLHFRPP--GPTLGLAVGWAGGR---ALESAE 120
               P   P+      A+ S       LH +  +P    P     +    G    A  +  
Sbjct: 1172 EPQPRPRPSPRQARRAEPS-------LHQVVLQPSRLSPLTQSPLSSRTGSPELAARARP 1224

Query: 121  RTAMFLALASFSVLLVPGTAILMSHAQTPQTGNGGISSSSVPPS--------PISQVSPA 172
            R  +        + L P  A+  S   TP TG+   SS S  PS         ++   P+
Sbjct: 1225 RPGLLQQAEMSEITLQPPAAVSFSRKSTPSTGSPSQSSRSGSPSYRPAMGFTTLATGYPS 1284

Query: 173  SPPPPLPS---SCLPMCSLVPSPLGTGPSL 199
             PP P P+     L +    PSP  TG  L
Sbjct: 1285 PPPGPAPAGPGDSLDVFGQTPSPRRTGEEL 1314


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.133    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,373,343
Number of Sequences: 37866
Number of extensions: 782370
Number of successful extensions: 10496
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 455
Number of HSP's that attempted gapping in prelim test: 7952
Number of HSP's gapped (non-prelim): 2567
length of query: 211
length of database: 18,247,518
effective HSP length: 98
effective length of query: 113
effective length of database: 14,536,650
effective search space: 1642641450
effective search space used: 1642641450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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