Guide to the Human Genome
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Name: CRTC2 Sequence: fasta or formatted (693aa) NCBI GI: 32171215
Description:

CREB regulated transcription coactivator 2

Referenced in:

CREB / ATF Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         43           3
 C cysteine            0.6          4           1
 D aspartate           3.8         26           2
 E glutamate           4.0         28           2
 F phenylalanine       2.3         16           1
 G glycine             8.7         60           2
 H histidine           3.8         26           2
 I isoleucine          2.0         14           2
 K lysine              2.0         14           2
 L leucine            11.4         79           2
 M methionine          2.3         16           2
 N asparagine          3.2         22           1
 P proline            13.6         94           3
 Q glutamine           5.1         35           3
 R arginine            5.1         35           2
 S serine             15.7        109           8
 T threonine           5.1         35           2
 V valine              2.9         20           1
 W tryptophan          0.4          3           1
 Y tyrosine            2.0         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CREB regulated transcription coactivator 2 
CRTC1                 0.233   mucoepidermoid carcinoma translocated 1 isoform 1 [...
CRTC3                 0.227   transducer of regulated CREB protein 3 isoform a [H...
CRTC1                 0.226   mucoepidermoid carcinoma translocated 1 isoform 3 [...
CRTC3                 0.225   transducer of regulated CREB protein 3 isoform b [H...
ATN1                  0.040   atrophin-1 
ATN1                  0.040   atrophin-1 
FLJ22184              0.034   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.032   PREDICTED: hypothetical protein LOC80164 
FLJ22184              0.030   PREDICTED: hypothetical protein FLJ22184 
MLL2                  0.027   myeloid/lymphoid or mixed-lineage leukemia 2 
RERE                  0.027   atrophin-1 like protein isoform b 
RERE                  0.027   atrophin-1 like protein isoform a 
RERE                  0.027   atrophin-1 like protein isoform a 
MBD6                  0.027   methyl-CpG binding domain protein 6 
COL27A1               0.025   collagen, type XXVII, alpha 1 
BCL9                  0.025   B-cell CLL/lymphoma 9 
SEC24C                0.025   SEC24-related protein C 
SEC24C                0.025   SEC24-related protein C 
PTPN23                0.024   protein tyrosine phosphatase, non-receptor type 23 [...
LOC651986             0.024   PREDICTED: similar to forkhead box L2 
BRD4                  0.024   bromodomain-containing protein 4 isoform long 
C13orf23              0.023   hypothetical protein LOC80209 isoform 2 
C13orf23              0.023   hypothetical protein LOC80209 isoform 1 
PPRC1                 0.022   peroxisome proliferator-activated receptor gamma, co...
POLR2A                0.022   DNA-directed RNA polymerase II A 
PCLO                  0.022   piccolo isoform 2 
PCLO                  0.022   piccolo isoform 1 
SHANK1                0.022   SH3 and multiple ankyrin repeat domains 1 
NACA                  0.022   nascent polypeptide-associated complex alpha subuni...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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