Guide to the Human Genome
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Search of human proteins with 239749835

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo
sapiens]
         (321 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo ...   662   0.0  
gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo ...   662   0.0  
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]            47   3e-05
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]            47   3e-05
gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens]     46   4e-05
gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens]     46   4e-05
gi|188536004 zinc finger protein 469 [Homo sapiens]                    44   3e-04
gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo ...    43   3e-04
gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo sapi...    43   3e-04
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]            43   4e-04
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            42   6e-04
gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo ...    42   7e-04
gi|153792074 proline rich 12 [Homo sapiens]                            42   0.001
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]               41   0.001
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]               41   0.001
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]               41   0.001
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]            41   0.002
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ...    41   0.002
gi|171184400 ATP-binding cassette, sub-family B, member 10 [Homo...    40   0.002
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ...    40   0.002
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ...    40   0.002
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]              40   0.002
gi|239755450 PREDICTED: hypothetical protein [Homo sapiens]            40   0.003
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ...    40   0.003
gi|239749929 PREDICTED: hypothetical protein [Homo sapiens]            40   0.003
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ...    40   0.003
gi|239744238 PREDICTED: hypothetical protein [Homo sapiens]            40   0.003
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ...    40   0.003
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]      40   0.004
gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]            40   0.004

>gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo
           sapiens]
          Length = 321

 Score =  662 bits (1707), Expect = 0.0
 Identities = 321/321 (100%), Positives = 321/321 (100%)

Query: 1   MSVQEAGATSPPARILKEPGPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSG 60
           MSVQEAGATSPPARILKEPGPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSG
Sbjct: 1   MSVQEAGATSPPARILKEPGPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSG 60

Query: 61  HQGRGCGDGGGARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKIS 120
           HQGRGCGDGGGARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKIS
Sbjct: 61  HQGRGCGDGGGARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKIS 120

Query: 121 KSPIPVQMAAGAAGCRTQARGQRLTSRGRESPEATGVPERRGDPETRRNRKSLTPGSGEF 180
           KSPIPVQMAAGAAGCRTQARGQRLTSRGRESPEATGVPERRGDPETRRNRKSLTPGSGEF
Sbjct: 121 KSPIPVQMAAGAAGCRTQARGQRLTSRGRESPEATGVPERRGDPETRRNRKSLTPGSGEF 180

Query: 181 GVRSQSCDSTVPESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTETFFCV 240
           GVRSQSCDSTVPESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTETFFCV
Sbjct: 181 GVRSQSCDSTVPESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTETFFCV 240

Query: 241 LPSALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPGRRDARG 300
           LPSALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPGRRDARG
Sbjct: 241 LPSALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPGRRDARG 300

Query: 301 AALGGAFRVLAGRALLRRGME 321
           AALGGAFRVLAGRALLRRGME
Sbjct: 301 AALGGAFRVLAGRALLRRGME 321


>gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo
           sapiens]
          Length = 321

 Score =  662 bits (1707), Expect = 0.0
 Identities = 321/321 (100%), Positives = 321/321 (100%)

Query: 1   MSVQEAGATSPPARILKEPGPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSG 60
           MSVQEAGATSPPARILKEPGPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSG
Sbjct: 1   MSVQEAGATSPPARILKEPGPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSG 60

Query: 61  HQGRGCGDGGGARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKIS 120
           HQGRGCGDGGGARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKIS
Sbjct: 61  HQGRGCGDGGGARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKIS 120

Query: 121 KSPIPVQMAAGAAGCRTQARGQRLTSRGRESPEATGVPERRGDPETRRNRKSLTPGSGEF 180
           KSPIPVQMAAGAAGCRTQARGQRLTSRGRESPEATGVPERRGDPETRRNRKSLTPGSGEF
Sbjct: 121 KSPIPVQMAAGAAGCRTQARGQRLTSRGRESPEATGVPERRGDPETRRNRKSLTPGSGEF 180

Query: 181 GVRSQSCDSTVPESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTETFFCV 240
           GVRSQSCDSTVPESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTETFFCV
Sbjct: 181 GVRSQSCDSTVPESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTETFFCV 240

Query: 241 LPSALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPGRRDARG 300
           LPSALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPGRRDARG
Sbjct: 241 LPSALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPGRRDARG 300

Query: 301 AALGGAFRVLAGRALLRRGME 321
           AALGGAFRVLAGRALLRRGME
Sbjct: 301 AALGGAFRVLAGRALLRRGME 321


>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 87/334 (26%), Positives = 113/334 (33%), Gaps = 59/334 (17%)

Query: 7   GATSPPARILKEPGPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGHQGRGC 66
           G  S P R    P   +  SA P   RG G   R  P         S  LA  G      
Sbjct: 158 GRLSAPPRHGPHPQSFRRPSAHPP-GRGSGRVPRGQPEQQAWEQRSSHFLAPEGSVASLL 216

Query: 67  GDGGGARVP-----TKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKISK 121
                AR P      +     G R        A  G A  P      +  A+     +++
Sbjct: 217 PSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSLAASLAR 276

Query: 122 SPIPVQ----------MAAGAAGCRTQARG---QRLTSRGRESPEATGVP-----ERRGD 163
           SP P+Q          +AA  AG R  +     +R   R   SP   G+P      R G+
Sbjct: 277 SPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGE 336

Query: 164 PETRRNRKSLTPGSGEFGVRS--QSCDSTVP----------ESLERALWAQSSQLAGGPG 211
               R R+    G  E  VR   Q C    P           + ER    Q  +  GGPG
Sbjct: 337 VVGARRRR----GGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPG 392

Query: 212 LAPRPGASGRGRWVSAPLPPKGTETFFCVLPS--------ALRAALSCGP------SWGE 257
           ++PR GA G G  V   + P+   +  C+ PS          RA  + GP      +  E
Sbjct: 393 VSPREGAQGEG--VRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAE 450

Query: 258 DSGPRHRELRP--DP-DSRRASAERSPRCPPGSP 288
           +    H    P  +P  SRR  A    R  P SP
Sbjct: 451 EVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSP 484


>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 87/334 (26%), Positives = 113/334 (33%), Gaps = 59/334 (17%)

Query: 7   GATSPPARILKEPGPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGHQGRGC 66
           G  S P R    P   +  SA P   RG G   R  P         S  LA  G      
Sbjct: 158 GRLSAPPRHGPHPQSFRRPSAHPP-GRGSGRVPRGQPEQQAWEQRSSHFLAPEGSVASLL 216

Query: 67  GDGGGARVP-----TKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKISK 121
                AR P      +     G R        A  G A  P      +  A+     +++
Sbjct: 217 PSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSLAASLAR 276

Query: 122 SPIPVQ----------MAAGAAGCRTQARG---QRLTSRGRESPEATGVP-----ERRGD 163
           SP P+Q          +AA  AG R  +     +R   R   SP   G+P      R G+
Sbjct: 277 SPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGE 336

Query: 164 PETRRNRKSLTPGSGEFGVRS--QSCDSTVP----------ESLERALWAQSSQLAGGPG 211
               R R+    G  E  VR   Q C    P           + ER    Q  +  GGPG
Sbjct: 337 VVGARRRR----GGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPG 392

Query: 212 LAPRPGASGRGRWVSAPLPPKGTETFFCVLPS--------ALRAALSCGP------SWGE 257
           ++PR GA G G  V   + P+   +  C+ PS          RA  + GP      +  E
Sbjct: 393 VSPREGAQGEG--VRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAE 450

Query: 258 DSGPRHRELRP--DP-DSRRASAERSPRCPPGSP 288
           +    H    P  +P  SRR  A    R  P SP
Sbjct: 451 EVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSP 484


>gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens]
          Length = 621

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 56/209 (26%), Positives = 72/209 (34%), Gaps = 24/209 (11%)

Query: 20  GPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGHQGRGCGDGGGAR-VPTKS 78
           GPA    +  E  +   +    GPGV        W   TSG  G G G     R +P  +
Sbjct: 18  GPASGTGSSQEGLQETRLAAGDGPGV--------WAAETSG--GNGLGAAAARRSLPDSA 67

Query: 79  VPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKISKSPIPVQM-------AAG 131
            P G P         AG     +  + PAA    L G +K++ SP             AG
Sbjct: 68  SPAGSPEVPGPCSSSAGLDLKDSGLESPAAAEAPLRGQYKVTASPETAVAGVGHELGTAG 127

Query: 132 AAGCRTQARG---QRLTSRGRESP-EATGVPERRGDPETRRNRKSLTPGSGEFGVRS--Q 185
            AG R    G     LT+ G E P  A G+     DP       SL        + S   
Sbjct: 128 DAGARPDLAGTCQAELTAAGSEEPSSAGGLSSSCSDPSPPGESPSLDSLESFSNLHSFPS 187

Query: 186 SCDSTVPESLERALWAQSSQLAGGPGLAP 214
           SC+    E  E  +  +    A  PG  P
Sbjct: 188 SCEFNSEEGAENRVPEEEEGAAVLPGAVP 216


>gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens]
          Length = 620

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 56/209 (26%), Positives = 72/209 (34%), Gaps = 24/209 (11%)

Query: 20  GPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGHQGRGCGDGGGAR-VPTKS 78
           GPA    +  E  +   +    GPGV        W   TSG  G G G     R +P  +
Sbjct: 18  GPASGTGSSQEGLQETRLAAGDGPGV--------WAAETSG--GNGLGAAAARRSLPDSA 67

Query: 79  VPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKISKSPIPVQM-------AAG 131
            P G P         AG     +  + PAA    L G +K++ SP             AG
Sbjct: 68  SPAGSPEVPGPCSSSAGLDLKDSGLESPAAAEAPLRGQYKVTASPETAVAGVGHELGTAG 127

Query: 132 AAGCRTQARG---QRLTSRGRESP-EATGVPERRGDPETRRNRKSLTPGSGEFGVRS--Q 185
            AG R    G     LT+ G E P  A G+     DP       SL        + S   
Sbjct: 128 DAGARPDLAGTCQAELTAAGSEEPSSAGGLSSSCSDPSPPGESPSLDSLESFSNLHSFPS 187

Query: 186 SCDSTVPESLERALWAQSSQLAGGPGLAP 214
           SC+    E  E  +  +    A  PG  P
Sbjct: 188 SCEFNSEEGAENRVPEEEEGAAVLPGAVP 216


>gi|188536004 zinc finger protein 469 [Homo sapiens]
          Length = 3925

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 89/338 (26%), Positives = 108/338 (31%), Gaps = 59/338 (17%)

Query: 6    AGATSPPARILKEPGPAQPLSAGPEWDRGRGVRRRCGPG------VLLGASSVSWGLATS 59
            A    P AR     G   PL    +  R  G R RC P       +L     VS     S
Sbjct: 3571 ASLPRPGARGQDAEGKRAPLVFSGK-RRAPGARGRCAPDHFQEDHLLQKEKEVSSSHMVS 3629

Query: 60   GHQGRGCGDGGGARVPTKSVPGGGPRASRS---------------VREVAGGGFACNPGK 104
                RG    G A  P         R++ S               V  +A G  A     
Sbjct: 3630 EGGPRGTFHKGSATKPAGCQSSSKDRSAASTPSKALKFPVHPRKAVGSLAPGELARGTEN 3689

Query: 105  G--PAAVRLALGGGWKISKSPIPVQMAAGAAGCRTQARGQRLTSRGRESPEATGVPERRG 162
            G  PA  +   G   + S SP P     G  G + Q    +L S    +P     P R  
Sbjct: 3690 GMKPATPKAKPGPSSQGSGSPRPGTKTGG--GSQPQPASGQLQSETATTPAKPSFPSRSP 3747

Query: 163  DPE---TRRNRKSLTPGSGEFGVRSQSCDSTVPESLERALWAQSSQLAGGPGLAPRPGAS 219
             PE    R   KS T G  E G +         E  E +   +  Q+   PG A      
Sbjct: 3748 APERLPARAQAKSCTKGPREAGEQGPHGSLGPKEKGESSTKRKKGQV---PGPARSESVG 3804

Query: 220  GRGRWVSAPLPPKGTETFFCVLPSALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAER 279
              GR  SAP  P  T                      + +  R    +P P+S     + 
Sbjct: 3805 SFGRAPSAPDKPPRTPR-------------------KQATPSRVLPTKPKPNS-----QN 3840

Query: 280  SPRCPPGSPRKAGPGRRDARGAALGGAFRVLAGRALLR 317
             PR PP   RKA PG    R   LG AF    GR LLR
Sbjct: 3841 KPRPPPSEQRKAEPGHTQ-RKDRLGKAFP--QGRPLLR 3875


>gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo
           sapiens]
          Length = 337

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 49/205 (23%), Positives = 76/205 (37%), Gaps = 29/205 (14%)

Query: 3   VQEAGATSPPARILKEPGP---AQPLSAGPEWDRGRGVRRRCGPGVLLGASSVS----WG 55
           ++E+   S P R L +      +Q   + P+   G G + +     ++GA S      WG
Sbjct: 106 IRESWTRSAPWRCLSQDAGRAGSQVCGSSPQTRGGGGKKLQRQKATVMGAKSRKKPQHWG 165

Query: 56  --LATSGHQGRGCGDGGGARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLAL 113
              AT+G +      GGG + P +  P      +R+ +   GG      GK P   + A 
Sbjct: 166 QKAATAGAKS----PGGGGKKPGQEKPAATGEKTRAAKSRGGG------GKKPRREKPAA 215

Query: 114 GGGWKISKSPIPVQMAAGAAGCRTQARGQRLTSRGRES----------PEATGVPERRGD 163
            G     K+         A G + + RGQ+ T  G +S          P A G     G 
Sbjct: 216 AGAKNPQKAAAAGAKFREAGGRKPRWRGQKATEAGAKSRGGGGIKPQKPAAAGAKIHGGK 275

Query: 164 PETRRNRKSLTPGSGEFGVRSQSCD 188
              RR + S     G+  +    CD
Sbjct: 276 KPRRRGQSSGNGVEGQNSLAFLECD 300


>gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo
           sapiens]
          Length = 946

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 49/168 (29%), Positives = 67/168 (39%), Gaps = 18/168 (10%)

Query: 138 QARGQRLTSRGRESPEATGVPERRGDPETRRNRKSLT---PGSGEFGVRSQSCDSTVP-- 192
           + +GQ L S    +PE  G   R G+P  +  +  L    PGSGE  V  +  ++TV   
Sbjct: 344 ERQGQFLGSETSPAPERGG--PRDGEPPGKMGKGYLPCGMPGSGEPEVGKRPEETTVSVQ 401

Query: 193 --ESLERALWAQSSQLAG--GPGLAPRPGASGRGRWVSAPLPPKGTETFFCVLPSALRAA 248
             ES +   W++  +     GP  A      G GRW  +     G+ T        L  +
Sbjct: 402 SAESSDSLSWSRLPRALASVGPEEARSGAPVGGGRWQLSDRVEGGSPTL-----GLLGGS 456

Query: 249 LSCGPSWG--EDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPG 294
            S  P  G  E   P  R L P P    A   + P+CPPG      PG
Sbjct: 457 PSAQPGTGNVEAGIPSGRMLEPLPCWDAAKDLKEPQCPPGDRVGVQPG 504


>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 426

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 58/204 (28%), Positives = 77/204 (37%), Gaps = 43/204 (21%)

Query: 122 SPIPVQMAAGAAGCRTQARG---QRLTSRGRESPEATGVP-----ERRGDPETRRNRKSL 173
           S  P ++AA  AG R  +     +R   R   SP   G+P      R G+    R R+  
Sbjct: 193 SASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRR-- 250

Query: 174 TPGSGEFGVRS--QSCDSTVP----------ESLERALWAQSSQLAGGPGLAPRPGASGR 221
             G  E  VR   Q C    P           + ER    Q  +  GGPG++PR GA G 
Sbjct: 251 --GGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGE 308

Query: 222 GRWVSAPLPPKGTETFFCVLPS--------ALRAALSCGP------SWGEDSGPRHRELR 267
           G  V   + P+   +  C+ PS          RA  + GP      +  E+    H    
Sbjct: 309 G--VRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASN 366

Query: 268 P--DP-DSRRASAERSPRCPPGSP 288
           P  +P  SRR  A    R  P SP
Sbjct: 367 PTYEPLSSRRTKAPSEGRDSPSSP 390


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 58/265 (21%), Positives = 82/265 (30%), Gaps = 68/265 (25%)

Query: 4   QEAGATSPPARILKEPGPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGHQG 63
           Q+A A    AR+  + G      A   W +  G                       G + 
Sbjct: 62  QKAAAGGKKARLRGQKGAVAGKEARQHWQKAAGA---------------------GGAEN 100

Query: 64  RGCGDGGGARVPTKSVPGGGPRASRSVREVAGGG------------FACNPGKGPAAVRL 111
           RG G+   A   TKS+ G G +  R  ++ A  G             A +  +G  A + 
Sbjct: 101 RGGGEQKAAAAGTKSLGGRGRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKA 160

Query: 112 ALGGGWKISKSPIPVQMAAGAAGCRT-----------------------------QARGQ 142
           A   G K      P + AA  A  R+                             + RG 
Sbjct: 161 AAAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGG 220

Query: 143 RLTSRGRESPEATGVPERRG-----DPETRRNRKSLTPGSGEFGVRSQSCDSTVPESLER 197
           R     R  P A G   RRG       + RR +K+ T G    G      D  +    + 
Sbjct: 221 RRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQN 280

Query: 198 ALWAQSSQLAGGPGLAPRPGASGRG 222
           A  A  ++  G      +P A GRG
Sbjct: 281 AALA-GAKRRGAATAGEKPAAKGRG 304



 Score = 35.8 bits (81), Expect = 0.052
 Identities = 40/176 (22%), Positives = 64/176 (36%), Gaps = 28/176 (15%)

Query: 8   ATSPPARILKEPGPAQPLSAGPEWDRGRGVRRRCGPG--VLLGASSVSWGLATSGHQGRG 65
           A   PA   +  G  +P   GP+  + RG + R G G              A +G + RG
Sbjct: 411 AQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRG 470

Query: 66  CGDGGGARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKISKSPIP 125
                           G  +AS +  +  GGG   + GK            W+  +    
Sbjct: 471 ------------DKKQGRQKASAAGTKSRGGGLKSHSGKNL----------WRRGQKAEA 508

Query: 126 VQMAAGAAGCRTQARGQRLTSRGRESPEATGVPERRGDPETRRNRKSLTPGSGEFG 181
               A AAG +++ R Q      R+ P   G   R G  ++R+ +K++  G+   G
Sbjct: 509 AGEKATAAGAKSRGRKQ----PRRQKPAVAGAKSRVGGSKSRQRQKAVAAGATSHG 560



 Score = 31.6 bits (70), Expect = 0.99
 Identities = 49/193 (25%), Positives = 69/193 (35%), Gaps = 21/193 (10%)

Query: 4   QEAGATSPPARILKEPGPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGHQG 63
           ++A A    +R  K+P   +P  AG +   G    R+    V  GA+S   G      Q 
Sbjct: 511 EKATAAGAKSRGRKQPRRQKPAVAGAKSRVGGSKSRQRQKAVAAGATSHGGG---GNKQS 567

Query: 64  RGCGDG----GGARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVR-LALGGGWK 118
           RG G       G         GGG +     +  AG   + +   G  A R  A G G K
Sbjct: 568 RGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSRSGDGGKKAWRQKAAGTGAK 627

Query: 119 ISKSP-------IPVQMAAGAAGCRT------QARGQRLTSRGRESPEATGVPERRGDPE 165
             K P             A A G  +      Q R Q+  + G ES  A  V +     +
Sbjct: 628 SRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAEARK 687

Query: 166 TRRNRKSLTPGSG 178
             R R++ + G G
Sbjct: 688 KPRRRRAKSRGDG 700


>gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo
           sapiens]
          Length = 536

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)

Query: 243 SALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPGRRDARGAA 302
           + LR+  + G + G +  P  R+ RP     R +  R+PRC P   R+ G      R  A
Sbjct: 78  AGLRSWGAAGSARGSEGRPSSRQARPLRRPSRRARRRAPRCAP--DRRCGDSAPRHRPRA 135

Query: 303 LGGAFRVLAGRALLRR 318
           LG   R L GR LLR+
Sbjct: 136 LGRGRRPLRGRVLLRQ 151


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 71/293 (24%), Positives = 92/293 (31%), Gaps = 39/293 (13%)

Query: 8   ATSPPARILKEPGPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGHQGRGCG 67
           A SP       PG  +P  AGP              G   GAS  + G   +G  G G G
Sbjct: 330 ACSPLGGGEPSPGAGEPSKAGPS-------------GATAGASGRATGPEAAG--GGGAG 374

Query: 68  DGGGARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKISKSPIPVQ 127
            GGG   P    P  G +  +     A GG    P     A       G   +       
Sbjct: 375 GGGGGYRPIIQSP--GYKTGKGGYGAAAGGATRPPPPRSTATPKCQSLGGPAAAYATGKA 432

Query: 128 MAAGAAGCRTQARGQRLTSRGRESPEATGVPERRGDPETRRNRKSLT-----PGSGEFGV 182
             AG AG +  + GQ    +G   P+A G     G  +      S +     P SG    
Sbjct: 433 SGAGGAGGQAYSPGQ---PQGLLGPQAYGQGFGGGQAQDLSKAPSYSGGPPQPPSGPPPP 489

Query: 183 RSQSCDSTVPESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTETFFCVLP 242
              +C S  P+ L+        QL G  G  P PG +   + +    P     T      
Sbjct: 490 GLATCQSYSPDQLQ-------GQLYGVQG-EPYPGPAAHSQGLPTASPSLSYST------ 535

Query: 243 SALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPGR 295
               A    G  WG  S     E  P    R   +  +   PPG      PG+
Sbjct: 536 GHSPALSGHGGGWGPSSLGGGGEASPSHIIRPLQSPPATGRPPGVGSPGAPGK 588


>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
          Length = 558

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 39/166 (23%), Positives = 62/166 (37%), Gaps = 31/166 (18%)

Query: 2   SVQEAGATSPPARILKEPGPA--QPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATS 59
           S   +G T+  +     P P+   P S+GP   R         P  +  A++ +  + ++
Sbjct: 23  SASSSGTTTSTSSATSSPAPSIGPPASSGPTLFR---------PEPIASAAAAAATVTST 73

Query: 60  GHQGRGCGDGGGARVPTKSVPGGGPRASRSVREVAGGGFACNP-------GKGPAAVRLA 112
           G  G G G GGG         GGG           GGG  CNP       G G     ++
Sbjct: 74  GGGGGGGGSGGGGGSSGNGGGGGG----------GGGGSNCNPNLAAASNGSGGGGGGIS 123

Query: 113 LGGGWKISKSPIPVQMAAGAAGCRTQARGQRLTSRGRESPEATGVP 158
            GGG     S  P+  + G++   + +     +S    S  ++  P
Sbjct: 124 AGGG---VASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGP 166


>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
          Length = 706

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 39/166 (23%), Positives = 62/166 (37%), Gaps = 31/166 (18%)

Query: 2   SVQEAGATSPPARILKEPGPA--QPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATS 59
           S   +G T+  +     P P+   P S+GP   R         P  +  A++ +  + ++
Sbjct: 23  SASSSGTTTSTSSATSSPAPSIGPPASSGPTLFR---------PEPIASAAAAAATVTST 73

Query: 60  GHQGRGCGDGGGARVPTKSVPGGGPRASRSVREVAGGGFACNP-------GKGPAAVRLA 112
           G  G G G GGG         GGG           GGG  CNP       G G     ++
Sbjct: 74  GGGGGGGGSGGGGGSSGNGGGGGG----------GGGGSNCNPNLAAASNGSGGGGGGIS 123

Query: 113 LGGGWKISKSPIPVQMAAGAAGCRTQARGQRLTSRGRESPEATGVP 158
            GGG     S  P+  + G++   + +     +S    S  ++  P
Sbjct: 124 AGGG---VASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGP 166


>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
          Length = 504

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 39/166 (23%), Positives = 62/166 (37%), Gaps = 31/166 (18%)

Query: 2   SVQEAGATSPPARILKEPGPA--QPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATS 59
           S   +G T+  +     P P+   P S+GP   R         P  +  A++ +  + ++
Sbjct: 23  SASSSGTTTSTSSATSSPAPSIGPPASSGPTLFR---------PEPIASAAAAAATVTST 73

Query: 60  GHQGRGCGDGGGARVPTKSVPGGGPRASRSVREVAGGGFACNP-------GKGPAAVRLA 112
           G  G G G GGG         GGG           GGG  CNP       G G     ++
Sbjct: 74  GGGGGGGGSGGGGGSSGNGGGGGG----------GGGGSNCNPNLAAASNGSGGGGGGIS 123

Query: 113 LGGGWKISKSPIPVQMAAGAAGCRTQARGQRLTSRGRESPEATGVP 158
            GGG     S  P+  + G++   + +     +S    S  ++  P
Sbjct: 124 AGGG---VASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGP 166


>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 255

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 71/249 (28%), Positives = 87/249 (34%), Gaps = 41/249 (16%)

Query: 70  GGARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGG-W----------- 117
           G  RVP        P A+RS R    GG   + G G A VR A GGG W           
Sbjct: 22  GSQRVPQ-------PPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFG 74

Query: 118 KISKSPIPVQMAAGAAGCRTQARGQRLTSRGRESPEATGVPERRGDPETRRNRKSLTPGS 177
           +     + V    GAA         R     R+ P   G P R   P T  +       S
Sbjct: 75  RGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSAS------FS 128

Query: 178 GEFGVRSQSCDSTVPESL--ERALWAQSSQLAGGPGLAPRPGA-SGRGRWVSAPLPPKGT 234
            +  +R +S  +     L  +RA    SS    GPG    P A  G      A     G 
Sbjct: 129 NQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGG 188

Query: 235 ETFFCVLPSALRAALSCG--PSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAG 292
                   +   AAL+C   P     +G R R +R     RR  A   P     +PR  G
Sbjct: 189 GRSRSAFVAGRDAALACAQLPRRPRGAGAR-RGMR-----RRLGAGERP-----APRPRG 237

Query: 293 PGRRDARGA 301
           P R  ARGA
Sbjct: 238 PPRAPARGA 246


>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
           sapiens]
          Length = 255

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 71/249 (28%), Positives = 87/249 (34%), Gaps = 41/249 (16%)

Query: 70  GGARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGG-W----------- 117
           G  RVP        P A+RS R    GG   + G G A VR A GGG W           
Sbjct: 22  GSQRVPQ-------PPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFG 74

Query: 118 KISKSPIPVQMAAGAAGCRTQARGQRLTSRGRESPEATGVPERRGDPETRRNRKSLTPGS 177
           +     + V    GAA         R     R+ P   G P R   P T  +       S
Sbjct: 75  RGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSAS------FS 128

Query: 178 GEFGVRSQSCDSTVPESL--ERALWAQSSQLAGGPGLAPRPGA-SGRGRWVSAPLPPKGT 234
            +  +R +S  +     L  +RA    SS    GPG    P A  G      A     G 
Sbjct: 129 NQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGG 188

Query: 235 ETFFCVLPSALRAALSCG--PSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAG 292
                   +   AAL+C   P     +G R R +R     RR  A   P     +PR  G
Sbjct: 189 GRSRSAFVAGRDAALACAQLPRRPRGAGAR-RGMR-----RRLGAGERP-----APRPRG 237

Query: 293 PGRRDARGA 301
           P R  ARGA
Sbjct: 238 PPRAPARGA 246


>gi|171184400 ATP-binding cassette, sub-family B, member 10 [Homo
           sapiens]
          Length = 738

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 55/182 (30%), Positives = 67/182 (36%), Gaps = 34/182 (18%)

Query: 7   GATSPPARILKEPGPAQP---LSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGHQG 63
           G  + P R+L+ P PA+P   L     W     V     P   L  + + WG   +   G
Sbjct: 3   GPPAWPLRLLEPPSPAEPGRLLPVACVWAAASRVPGSLSPFTGLRPARL-WGAGPALLWG 61

Query: 64  RGCGDGGGARVPTKSVPGGGPRASRSVREVA---------GGGFACNPGKGPAAVRLALG 114
                 G AR       GGGP ASR V  +A          G   C    GP A RL   
Sbjct: 62  -----VGAARRWRSGCRGGGPGASRGVLGLARLLGLWARGPGSCRCGAFAGPGAPRL--- 113

Query: 115 GGWKISKSPIPVQMAAGA-AGCRTQARGQRLT--SRGRESPEATGVPERR-----GDPET 166
                 ++  P   AA A AG     RG       +GR  P A G+PE R       PE 
Sbjct: 114 -----PRARFPGGPAAAAWAGDEAWRRGPAAPPGDKGRLRPAAAGLPEARKLLGLAYPER 168

Query: 167 RR 168
           RR
Sbjct: 169 RR 170


>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
           sapiens]
          Length = 400

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 89/331 (26%), Positives = 107/331 (32%), Gaps = 37/331 (11%)

Query: 7   GATSPPARILKEPGPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGHQGRGC 66
           GA  PP R L  P      SA     RG   R+   P    G +  S G      QG G 
Sbjct: 87  GAQRPPERFL--PSSVSAGSAARTLRRGSEARKAQTPRPA-GVAQGSGGGGERWLQGLGP 143

Query: 67  GDGGG-ARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAV-RLALGGGWKISKSPI 124
             G G +  P  S     P   R       GG     GK  A + + A GGG K +++  
Sbjct: 144 PRGRGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVLWKGAEGGGEKGNRN-- 201

Query: 125 PVQMAAGAAGCRTQARGQRLTSRGRESP-EATGVPERRGDPETRRNRKSLTPGSGEFGVR 183
              MAA   G   +   Q  T   R  P E    P     P  R  R  L PG    G  
Sbjct: 202 ---MAAAPLGDPAREAAQAQTGLRRRRPLELVPRPALPSAPSPRI-RCFLAPGRSRVGAA 257

Query: 184 SQSCDSTVPESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTETFFCVLPS 243
               +    E+  R LW +          A R G  G GR   A     G        P 
Sbjct: 258 LTE-EQAAGEAAARGLWRRKPAPCPRGACAARLGGRGTGRARRAEFRVAG--------PR 308

Query: 244 ALRAALSCGP---SWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKA--------- 291
            +      G    SW   S        PDP +  +  + +P  PP   R+A         
Sbjct: 309 GVAEEAESGRGWRSWPSFSAVSGGGESPDP-AGCSRGKAAPEEPPRVARRAHENRLRTSA 367

Query: 292 ---GPGRRDARGAALGGAFRVLAGRALLRRG 319
              GPG R   G   GG     AG  L R G
Sbjct: 368 RGLGPGDRRGDGRFGGGRGAEGAGSGLPRGG 398


>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
           sapiens]
          Length = 400

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 89/331 (26%), Positives = 107/331 (32%), Gaps = 37/331 (11%)

Query: 7   GATSPPARILKEPGPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGHQGRGC 66
           GA  PP R L  P      SA     RG   R+   P    G +  S G      QG G 
Sbjct: 87  GAQRPPERFL--PSSVSAGSAARTLRRGSEARKAQTPRPA-GVAQGSGGGGERWLQGLGP 143

Query: 67  GDGGG-ARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAV-RLALGGGWKISKSPI 124
             G G +  P  S     P   R       GG     GK  A + + A GGG K +++  
Sbjct: 144 PRGRGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVLWKGAEGGGEKGNRN-- 201

Query: 125 PVQMAAGAAGCRTQARGQRLTSRGRESP-EATGVPERRGDPETRRNRKSLTPGSGEFGVR 183
              MAA   G   +   Q  T   R  P E    P     P  R  R  L PG    G  
Sbjct: 202 ---MAAAPLGDPAREAAQAQTGLRRRRPLELVPRPALPSAPSPRI-RCFLAPGRSRVGAA 257

Query: 184 SQSCDSTVPESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTETFFCVLPS 243
               +    E+  R LW +          A R G  G GR   A     G        P 
Sbjct: 258 LTE-EQAAGEAAARGLWRRKPAPCPRGACAARLGGRGTGRARRAEFRVAG--------PR 308

Query: 244 ALRAALSCGP---SWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKA--------- 291
            +      G    SW   S        PDP +  +  + +P  PP   R+A         
Sbjct: 309 GVAEEAESGRGWRSWPSFSAVSGGGESPDP-AGCSRGKAAPEEPPRVARRAHENRLRTSA 367

Query: 292 ---GPGRRDARGAALGGAFRVLAGRALLRRG 319
              GPG R   G   GG     AG  L R G
Sbjct: 368 RGLGPGDRRGDGRFGGGRGAEGAGSGLPRGG 398


>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
          Length = 2400

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 73/288 (25%), Positives = 86/288 (29%), Gaps = 52/288 (18%)

Query: 17  KEPGPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGHQGRGCGDGGGARVPT 76
           K  G AQ +     W  G   R RC       ASS   GL         C      R P 
Sbjct: 424 KRWGLAQHVRCSGLWGHGTAGRERCSQDSASPASST--GLPEGSEPESSCCP----RTPE 477

Query: 77  KSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKISKSPIPVQMAAGAAGCR 136
             V    P A       AGG    +PG                        +    AG  
Sbjct: 478 DGVDSASPSAQIGAERKAGGSLGEDPG------------------------LCIDGAGLG 513

Query: 137 TQARGQRLTSRGR-ESPEATGVPERRGDPETRRNRKSLTPGSGEFGVRSQSCDSTVPESL 195
              +G RLT R R E   ++      G  E          GS E+G R Q C        
Sbjct: 514 GPEQGGRLTPRARSEEGASSDSSASTGSHE----------GSSEWGGRPQGCPGKA---- 559

Query: 196 ERALWAQSSQLAGGPGLAPRPGASG-RGRWVSAPLPPKGTE--TFFCVLPSALRAALSCG 252
            RA  +Q     GG   +P    S  R   + A    +GTE  T   V    L   LSC 
Sbjct: 560 -RAETSQQEASEGGDPASPALSLSSLRSDDLQAETQGQGTEQATGAAVTREPLVLGLSC- 617

Query: 253 PSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPGRRDARG 300
            SW +  G            +     RS      SP   G GR   RG
Sbjct: 618 -SW-DSEGASSTPSTCTSSQQGQRRHRSRASAMSSPSSPGLGRVAPRG 663



 Score = 33.9 bits (76), Expect = 0.20
 Identities = 57/239 (23%), Positives = 75/239 (31%), Gaps = 21/239 (8%)

Query: 5    EAGATSPP-ARILKEPG--PAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGH 61
            E GA  P  +    +PG  PAQ    GP  +      R C         +   G      
Sbjct: 814  EQGAVGPHRSHCCSQPGTQPAQEAQRGPSPEASWLCGRYC--------PTPPRGRPCPQR 865

Query: 62   QGRGCGDGGGARVPTKSVPGGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKISK 121
            +   CG  G +   T   PGG P+         G   +  P  G +    A  G      
Sbjct: 866  RSSSCGSTGSSHQSTARGPGGSPQEG---TRQPGPTPSPGPNSGASRRSSASQGAGSRGL 922

Query: 122  SPIPVQMAAGAAGCRTQARGQRLTSRGRESPEATGVPERRGDPE----TRRNRKSLTPGS 177
            S      + G    + +A G   +S  R SPEA         PE            T G+
Sbjct: 923  SEEKTLRSGGGPQGQEEASGVSPSSLPRSSPEAVVREWLDNIPEEPILMTYELADETTGA 982

Query: 178  GEFGVRSQSCDSTVPESLE---RALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKG 233
               G+R    D     SLE       A    L G PG  P P  +  G   + P   +G
Sbjct: 983  AGGGLRGPEVDPGDDHSLEGLGEPAQAGQQSLEGDPGQDPEPEGALLGSSDTGPQSGEG 1041


>gi|239755450 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 153

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 23/104 (22%)

Query: 192 PESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTETFFCVLPSALRAALSC 251
           P      LW +  +L G PG AP     G  R   A LPP GT + F       RAA   
Sbjct: 60  PARPSHLLWPK--RLPGRPGRAP-----GDRR---AALPPPGTRSPFA------RAAAEL 103

Query: 252 GPSWGEDSGPRHREL-------RPDPDSRRASAERSPRCPPGSP 288
           GPS+ + +G R R +       RP P S  A++ R+ R   G P
Sbjct: 104 GPSYQQIAGLRRRPVSHSPAHERPSPASSAAASARTSRGDSGDP 147



 Score = 37.4 bits (85), Expect = 0.018
 Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 17/111 (15%)

Query: 215 RPGASGRGRWV-SAPLPPKGTETFFCVLPSALRAALSCGPSWGEDSGPRHRELRPDPDSR 273
           R G +GRG W+      P G E++  +L S  R A   G S+  +  PR R   P P   
Sbjct: 6   RAGRAGRGPWIIRGASRPSGAESYSELLSS--RPASPRGASFSAE--PRPRASLPPPRPA 61

Query: 274 RASAERSPRCPPGSPRKA---------GPGRRD--ARGAA-LGGAFRVLAG 312
           R S    P+  PG P +A          PG R   AR AA LG +++ +AG
Sbjct: 62  RPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAG 112


>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
           sapiens]
          Length = 355

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 74/282 (26%), Positives = 90/282 (31%), Gaps = 65/282 (23%)

Query: 21  PAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGHQGRGCGDGGGARVPTKSVP 80
           P  PL A  E D      R  GP    GA +   G   + +          +RVP   +P
Sbjct: 100 PRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAH----SSSRVPRPRLP 155

Query: 81  GGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKISKSPIPVQMAAGAAGCRTQAR 140
                      +  G      PG    A R  LGG                +A  RT+ R
Sbjct: 156 S----------QRRGASCGLGPGPESRAARQGLGGR---------------SARARTR-R 189

Query: 141 GQRLTSRGRESPEATGVPERRGDPETRRNRKSLTPGSGEFG-VRSQSCDSTVPESLERAL 199
           G   T R    P  TG  +    P TR   ++   GS   G  R     S    +  R L
Sbjct: 190 GPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCL 249

Query: 200 WAQSSQLAGGPGLAPRPGASG----RGRWVSAPL--PPKGTETFFCVLPSALRAALSCGP 253
                      GL+P PG S     R      PL  PP        + PSA R    C  
Sbjct: 250 -----------GLSP-PGRSRLFSPRSSLARPPLRFPPARP----ALSPSARRR---CRV 290

Query: 254 SWGEDSGP---------RHRELRPDPDSRRASAERSPRCPPG 286
           +W + S P         RH   RP     RA A R P   PG
Sbjct: 291 NWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPG 332


>gi|239749929 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 153

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 23/104 (22%)

Query: 192 PESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTETFFCVLPSALRAALSC 251
           P      LW +  +L G PG AP     G  R   A LPP GT + F       RAA   
Sbjct: 60  PARPSHLLWPK--RLPGRPGRAP-----GDRR---AALPPPGTRSPFA------RAAAEL 103

Query: 252 GPSWGEDSGPRHREL-------RPDPDSRRASAERSPRCPPGSP 288
           GPS+ + +G R R +       RP P S  A++ R+ R   G P
Sbjct: 104 GPSYQQIAGLRRRPVSHSPAHERPSPASSAAASARTSRGDSGDP 147



 Score = 35.8 bits (81), Expect = 0.052
 Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 17/111 (15%)

Query: 215 RPGASGRGRWV-SAPLPPKGTETFFCVLPSALRAALSCGPSWGEDSGPRHRELRPDPDSR 273
           R G +GRG W+      P G E++  +L S  R     G S+  +  PR R   P P   
Sbjct: 6   RAGRAGRGPWIIRGASRPSGAESYSELLSS--RPVSPRGASFSAE--PRPRASLPPPRPA 61

Query: 274 RASAERSPRCPPGSPRKA---------GPGRRD--ARGAA-LGGAFRVLAG 312
           R S    P+  PG P +A          PG R   AR AA LG +++ +AG
Sbjct: 62  RPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAG 112


>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
           sapiens]
          Length = 355

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 74/282 (26%), Positives = 90/282 (31%), Gaps = 65/282 (23%)

Query: 21  PAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGHQGRGCGDGGGARVPTKSVP 80
           P  PL A  E D      R  GP    GA +   G   + +          +RVP   +P
Sbjct: 100 PRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAH----SSSRVPRPRLP 155

Query: 81  GGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKISKSPIPVQMAAGAAGCRTQAR 140
                      +  G      PG    A R  LGG                +A  RT+ R
Sbjct: 156 S----------QRRGASCGLGPGPESRAARQGLGGR---------------SARARTR-R 189

Query: 141 GQRLTSRGRESPEATGVPERRGDPETRRNRKSLTPGSGEFG-VRSQSCDSTVPESLERAL 199
           G   T R    P  TG  +    P TR   ++   GS   G  R     S    +  R L
Sbjct: 190 GPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCL 249

Query: 200 WAQSSQLAGGPGLAPRPGASG----RGRWVSAPL--PPKGTETFFCVLPSALRAALSCGP 253
                      GL+P PG S     R      PL  PP        + PSA R    C  
Sbjct: 250 -----------GLSP-PGRSRLFSPRSSLARPPLRFPPARP----ALSPSARRR---CRV 290

Query: 254 SWGEDSGP---------RHRELRPDPDSRRASAERSPRCPPG 286
           +W + S P         RH   RP     RA A R P   PG
Sbjct: 291 NWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPG 332


>gi|239744238 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 153

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 23/104 (22%)

Query: 192 PESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTETFFCVLPSALRAALSC 251
           P      LW +  +L G PG AP     G  R   A LPP GT + F       RAA   
Sbjct: 60  PARPSHLLWPK--RLPGRPGRAP-----GDRR---AALPPPGTRSPFA------RAAAEL 103

Query: 252 GPSWGEDSGPRHREL-------RPDPDSRRASAERSPRCPPGSP 288
           GPS+ + +G R R +       RP P S  A++ R+ R   G P
Sbjct: 104 GPSYQQIAGLRRRPVSHSPAHERPSPASSAAASARTSRGDSGDP 147



 Score = 35.8 bits (81), Expect = 0.052
 Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 17/111 (15%)

Query: 215 RPGASGRGRWV-SAPLPPKGTETFFCVLPSALRAALSCGPSWGEDSGPRHRELRPDPDSR 273
           R G +GRG W+      P G E++  +L S  R     G S+  +  PR R   P P   
Sbjct: 6   RAGRAGRGPWIIRGASRPSGAESYSELLSS--RPVSPRGASFSAE--PRPRASLPPPRPA 61

Query: 274 RASAERSPRCPPGSPRKA---------GPGRRD--ARGAA-LGGAFRVLAG 312
           R S    P+  PG P +A          PG R   AR AA LG +++ +AG
Sbjct: 62  RPSHLLWPKRLPGRPGRAPGDRRAALPPPGTRSPFARAAAELGPSYQQIAG 112


>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
           sapiens]
          Length = 355

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 74/282 (26%), Positives = 90/282 (31%), Gaps = 65/282 (23%)

Query: 21  PAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGHQGRGCGDGGGARVPTKSVP 80
           P  PL A  E D      R  GP    GA +   G   + +          +RVP   +P
Sbjct: 100 PRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAH----SSSRVPRPRLP 155

Query: 81  GGGPRASRSVREVAGGGFACNPGKGPAAVRLALGGGWKISKSPIPVQMAAGAAGCRTQAR 140
                      +  G      PG    A R  LGG                +A  RT+ R
Sbjct: 156 S----------QRRGASCGLGPGPESRAARQGLGGR---------------SARARTR-R 189

Query: 141 GQRLTSRGRESPEATGVPERRGDPETRRNRKSLTPGSGEFG-VRSQSCDSTVPESLERAL 199
           G   T R    P  TG  +    P TR   ++   GS   G  R     S    +  R L
Sbjct: 190 GPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCL 249

Query: 200 WAQSSQLAGGPGLAPRPGASG----RGRWVSAPL--PPKGTETFFCVLPSALRAALSCGP 253
                      GL+P PG S     R      PL  PP        + PSA R    C  
Sbjct: 250 -----------GLSP-PGRSRLFSPRSSLARPPLRFPPARP----ALSPSARRR---CRV 290

Query: 254 SWGEDSGP---------RHRELRPDPDSRRASAERSPRCPPG 286
           +W + S P         RH   RP     RA A R P   PG
Sbjct: 291 NWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPG 332


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 88/326 (26%), Positives = 107/326 (32%), Gaps = 62/326 (19%)

Query: 7   GATSPPARILKEPGPAQPLS----------AGPEWDRG----RGVRRRCGPGVLLGASSV 52
           GA  PP       GPA P            AGP+  RG    +GVR   GP    GA+  
Sbjct: 329 GAAGPPG----PTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGP 384

Query: 53  SWGLATSGHQGRGCGDGG----------GARVPTKSVPGGGPRASRSVREVAGGGFACNP 102
           +      G  G    +G           GAR P+     GGP   +            N 
Sbjct: 385 AGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKG-----------NS 433

Query: 103 GKGPAAVRLALGGGWKISKSPIPVQMAAGAAGCRTQARGQRLTSRGRESPEAT-GVPERR 161
           G+ P A       G K    P+ VQ   G AG      G+R  +RG   P    G P  R
Sbjct: 434 GE-PGAPGSKGDTGAKGEPGPVGVQGPPGPAG----EEGKR-GARGEPGPTGLPGPPGER 487

Query: 162 GDPETRRNRKSLTPGSGEFGVRSQSCDSTVPESLERALWAQSSQLAGGPGLAPRPGASGR 221
           G P +R       PG+   GV      +    S   A    S   AG PG A  PGA G 
Sbjct: 488 GGPGSRG-----FPGAD--GVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGL 540

Query: 222 GRWVSAPLPPKGTETFFCVLPSALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAE--- 278
                +P P   T       P         GP  G         +   P  + A+ E   
Sbjct: 541 TGSPGSPGPDGKTGP-----PGPAGQDGRPGPP-GPPGARGQAGVMGFPGPKGAAGEPGK 594

Query: 279 RSPRCPPGSPRKAGPGRRDARGAALG 304
              R  PG P   GP  +D    A G
Sbjct: 595 AGERGVPGPPGAVGPAGKDGEAGAQG 620



 Score = 35.0 bits (79), Expect = 0.089
 Identities = 75/298 (25%), Positives = 91/298 (30%), Gaps = 56/298 (18%)

Query: 6    AGATSPPARILKEPGPAQPLSAGPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGHQGRG 65
            AG   PP        P  P  AG E   G+G R   GP    G          +G +G  
Sbjct: 880  AGRVGPPGPSGNAGPPGPPGPAGKEG--GKGPRGETGPAGRPGEVGPPGPPGPAGEKGSP 937

Query: 66   CGDGGGARVPTKSVPGGGPRASRSVREVAG-------GGFACNPGKGPAAVRLALGG--G 116
              DG     P  +    GP+     R V G        GF   PG      +    G  G
Sbjct: 938  GADG-----PAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASG 992

Query: 117  WKISKSPIPVQMAAGAAGCRTQARGQRLTSRGRE-SPEATGVPERRGDPETRRNRKSLTP 175
             +    P+     AG  G             GRE +P A G P R G P  + +R     
Sbjct: 993  ERGPPGPMGPPGLAGPPG-----------ESGREGAPGAEGSPGRDGSPGAKGDR----- 1036

Query: 176  GSGEFGVRSQSCDSTVPESLERALWAQSSQLAGGPGLAPRPGASGRGRWVSAPLPPKGTE 235
              GE G          P               G PG     G SG  R  + P  P G  
Sbjct: 1037 --GETGPAGPPGAPGAP---------------GAPGPVGPAGKSG-DRGETGPAGPAGP- 1077

Query: 236  TFFCVLPSALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGP 293
                V P   R         G+      +  R     R  S  + P  PPGSP + GP
Sbjct: 1078 ----VGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGP 1131



 Score = 30.0 bits (66), Expect = 2.9
 Identities = 53/181 (29%), Positives = 62/181 (34%), Gaps = 33/181 (18%)

Query: 148 GRESP---EATGVPERRGDPETRRNRKSLTPGSGEFGVRSQSCDSTVPESLERALWAQSS 204
           G ESP   E TGV   +GD   R  R    P  G  G+  Q                   
Sbjct: 98  GSESPTDQETTGVEGPKGDTGPRGPRGPAGP-PGRDGIPGQP------------------ 138

Query: 205 QLAGGPGLAPRPGASGRGRWVSAPLPPKGTE--TFFCVLPSALRAALSCG-PSWGEDSGP 261
            L G PG    PG  G G   +  L     E  T    +P  +  +   G P      GP
Sbjct: 139 GLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGP 198

Query: 262 RHRELRP-DPDSRRASAERSPRCPPGSPRKAG-------PGRRDARGAALGGAFRVLAGR 313
           +  +  P +P    AS    PR PPG P K G       PGR   RG       R L G 
Sbjct: 199 QGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGT 258

Query: 314 A 314
           A
Sbjct: 259 A 259



 Score = 28.9 bits (63), Expect = 6.4
 Identities = 86/306 (28%), Positives = 97/306 (31%), Gaps = 55/306 (17%)

Query: 20   GPAQPLSA--GPEWDRGRGVRRRCGPGVLLGASSVSWGLATSGHQG----RGC-GDGGGA 72
            G A P  A   P  D  RG+    GP    GA         SG  G    RG  GD G  
Sbjct: 746  GDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEP 805

Query: 73   RVPTKS----VPG--GGPRASRSVREVAGGGFACNPGK-GPAAVRLALGGGWKISKSPIP 125
              P  +     PG  G P A     +    G A  PG  GPA               PI 
Sbjct: 806  GPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAG-----------PPGPIG 854

Query: 126  VQMAAGAAGCRTQARGQRLT----SRGRESPEATGVPERRGDPETRRNRKSLTPGSGEFG 181
               A GA G R  A     T    + GR  P           P     ++      GE G
Sbjct: 855  NVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETG 914

Query: 182  VRSQSCDSTVPESLERALWAQSSQLAGGPGLAP-RPGASG-RGRWVSAPLPPKGTETFFC 239
               +  +   P     A   + S  A GP  AP  PG  G  G+     LP +  E  F 
Sbjct: 915  PAGRPGEVGPPGPPGPA-GEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFP 973

Query: 240  VLPSALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGP----GR 295
             LP         GPS                    AS ER P  P G P  AGP    GR
Sbjct: 974  GLPGPSGEPGKQGPSG-------------------ASGERGPPGPMGPPGLAGPPGESGR 1014

Query: 296  RDARGA 301
              A GA
Sbjct: 1015 EGAPGA 1020


>gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 402

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 76/264 (28%), Positives = 88/264 (33%), Gaps = 60/264 (22%)

Query: 82  GGPRASRSVREVAG--------GGFACN--------PGKGPAAVRLALGGGWKISKSPIP 125
           G P   R VREV           G +C         PG+G    +   G G   S  P  
Sbjct: 56  GAPGTQRGVREVGSPTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPCA 115

Query: 126 VQMAA-----GAAGCRTQARGQRLTSRGRESPEATGVPERRG-DPET--RRNRKSLTPGS 177
            Q  A     G AGCRT+ +G    +  R  P   G       +P T  R    SL   S
Sbjct: 116 PQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQAS 175

Query: 178 GEFGVRSQSCDSTVPESLER------ALWAQSSQLAGGPGLA----------PRPGASGR 221
                RS +     P SL+       A        + GPG            P P    R
Sbjct: 176 -----RSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCR 230

Query: 222 GRWVSAPLPPKGTETFFCVLPSALRAAL----SCGPSW------GEDSGPRHRELRPDPD 271
            RWV AP P           P ALR AL    S  PS       G  +G    EL   P 
Sbjct: 231 SRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAG-LGTELTLTPS 289

Query: 272 SRRASAERSPRCPPGSPRKAGPGR 295
           SRRA        P  S R+A P R
Sbjct: 290 SRRAHGSH----PLSSERQAAPTR 309


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.135    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,285,116
Number of Sequences: 37866
Number of extensions: 1106912
Number of successful extensions: 5611
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 470
Number of HSP's that attempted gapping in prelim test: 4986
Number of HSP's gapped (non-prelim): 1030
length of query: 321
length of database: 18,247,518
effective HSP length: 102
effective length of query: 219
effective length of database: 14,385,186
effective search space: 3150355734
effective search space used: 3150355734
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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