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Search of human proteins with 117956409
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|117956409 amyotrophic lateral sclerosis 2 (juvenile)
chromosome region, candidate 8 [Homo sapiens]
(725 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157168372 amyotrophic lateral sclerosis 2 (juvenile) chromoso... 1449 0.0
gi|117956409 amyotrophic lateral sclerosis 2 (juvenile) chromoso... 1449 0.0
gi|161019170 mucin 5AC [Homo sapiens] 36 0.11
gi|31543535 R3H domain containing 1 [Homo sapiens] 36 0.11
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 36 0.14
gi|148596992 heart alpha-kinase [Homo sapiens] 35 0.25
gi|38569491 serine/threonine-protein kinase QSK [Homo sapiens] 35 0.32
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 34 0.42
gi|45505139 phosphoinositide-3-kinase adaptor protein 1 [Homo sa... 34 0.55
gi|105990535 coagulation factor V precursor [Homo sapiens] 33 0.71
gi|31541941 heat shock 70kDa protein 4-like [Homo sapiens] 33 0.93
gi|93004081 polo-like kinase 2 [Homo sapiens] 33 1.2
gi|225543461 tetratricopeptide repeat, ankyrin repeat and coiled... 32 1.6
gi|7019405 host cell factor C2 [Homo sapiens] 32 1.6
gi|5292161 proteasome 26S non-ATPase subunit 4 [Homo sapiens] 32 2.1
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 32 2.7
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 32 2.7
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens] 32 2.7
gi|50843837 hypothetical protein LOC55701 [Homo sapiens] 31 3.5
gi|112363100 SLIT-ROBO Rho GTPase activating protein 2 isoform a... 31 3.5
gi|112363096 SLIT-ROBO Rho GTPase activating protein 2 isoform b... 31 3.5
gi|91982772 mucin 17 [Homo sapiens] 31 4.6
gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens] 30 6.0
gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens] 30 6.0
gi|31657094 anillin, actin binding protein [Homo sapiens] 30 6.0
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 30 7.9
gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens] 30 7.9
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 30 7.9
gi|219802034 nuclear factor related to kappaB binding protein is... 30 7.9
gi|23346420 nuclear factor related to kappaB binding protein iso... 30 7.9
>gi|157168372 amyotrophic lateral sclerosis 2 (juvenile) chromosome
region, candidate 8 [Homo sapiens]
Length = 725
Score = 1449 bits (3750), Expect = 0.0
Identities = 725/725 (100%), Positives = 725/725 (100%)
Query: 1 MEQSNDSLRVNHNDGEESKTSAQVFEHLICMDSRDSSFGQNDSPTVLPITTREANNSLIS 60
MEQSNDSLRVNHNDGEESKTSAQVFEHLICMDSRDSSFGQNDSPTVLPITTREANNSLIS
Sbjct: 1 MEQSNDSLRVNHNDGEESKTSAQVFEHLICMDSRDSSFGQNDSPTVLPITTREANNSLIS 60
Query: 61 QNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQVLRVIPP 120
QNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQVLRVIPP
Sbjct: 61 QNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQVLRVIPP 120
Query: 121 TQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSNYILHPQTSFPLP 180
TQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSNYILHPQTSFPLP
Sbjct: 121 TQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSNYILHPQTSFPLP 180
Query: 181 KKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQ 240
KKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQ
Sbjct: 181 KKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQ 240
Query: 241 TQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQYGPRRKGFQLKKV 300
TQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQYGPRRKGFQLKKV
Sbjct: 241 TQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQYGPRRKGFQLKKV 300
Query: 301 SEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQEKAFNMLKKNLVD 360
SEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQEKAFNMLKKNLVD
Sbjct: 301 SEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQEKAFNMLKKNLVD 360
Query: 361 AGGVLRWYVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQ 420
AGGVLRWYVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQ
Sbjct: 361 AGGVLRWYVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQ 420
Query: 421 VAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQ 480
VAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQ
Sbjct: 421 VAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQ 480
Query: 481 KSLRNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSL 540
KSLRNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSL
Sbjct: 481 KSLRNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSL 540
Query: 541 SPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGS 600
SPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGS
Sbjct: 541 SPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGS 600
Query: 601 AVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNL 660
AVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNL
Sbjct: 601 AVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNL 660
Query: 661 EGTVHRILLGDVQTIPIQIIDNHSALIEENPESTISVSQVKQEPKEPALSMEAKKTVDYK 720
EGTVHRILLGDVQTIPIQIIDNHSALIEENPESTISVSQVKQEPKEPALSMEAKKTVDYK
Sbjct: 661 EGTVHRILLGDVQTIPIQIIDNHSALIEENPESTISVSQVKQEPKEPALSMEAKKTVDYK 720
Query: 721 KLSAT 725
KLSAT
Sbjct: 721 KLSAT 725
>gi|117956409 amyotrophic lateral sclerosis 2 (juvenile) chromosome
region, candidate 8 [Homo sapiens]
Length = 725
Score = 1449 bits (3750), Expect = 0.0
Identities = 725/725 (100%), Positives = 725/725 (100%)
Query: 1 MEQSNDSLRVNHNDGEESKTSAQVFEHLICMDSRDSSFGQNDSPTVLPITTREANNSLIS 60
MEQSNDSLRVNHNDGEESKTSAQVFEHLICMDSRDSSFGQNDSPTVLPITTREANNSLIS
Sbjct: 1 MEQSNDSLRVNHNDGEESKTSAQVFEHLICMDSRDSSFGQNDSPTVLPITTREANNSLIS 60
Query: 61 QNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQVLRVIPP 120
QNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQVLRVIPP
Sbjct: 61 QNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQVLRVIPP 120
Query: 121 TQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSNYILHPQTSFPLP 180
TQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSNYILHPQTSFPLP
Sbjct: 121 TQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSNYILHPQTSFPLP 180
Query: 181 KKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQ 240
KKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQ
Sbjct: 181 KKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQ 240
Query: 241 TQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQYGPRRKGFQLKKV 300
TQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQYGPRRKGFQLKKV
Sbjct: 241 TQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQYGPRRKGFQLKKV 300
Query: 301 SEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQEKAFNMLKKNLVD 360
SEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQEKAFNMLKKNLVD
Sbjct: 301 SEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQEKAFNMLKKNLVD 360
Query: 361 AGGVLRWYVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQ 420
AGGVLRWYVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQ
Sbjct: 361 AGGVLRWYVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQ 420
Query: 421 VAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQ 480
VAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQ
Sbjct: 421 VAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQ 480
Query: 481 KSLRNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSL 540
KSLRNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSL
Sbjct: 481 KSLRNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSL 540
Query: 541 SPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGS 600
SPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGS
Sbjct: 541 SPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGS 600
Query: 601 AVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNL 660
AVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNL
Sbjct: 601 AVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNL 660
Query: 661 EGTVHRILLGDVQTIPIQIIDNHSALIEENPESTISVSQVKQEPKEPALSMEAKKTVDYK 720
EGTVHRILLGDVQTIPIQIIDNHSALIEENPESTISVSQVKQEPKEPALSMEAKKTVDYK
Sbjct: 661 EGTVHRILLGDVQTIPIQIIDNHSALIEENPESTISVSQVKQEPKEPALSMEAKKTVDYK 720
Query: 721 KLSAT 725
KLSAT
Sbjct: 721 KLSAT 725
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 36.2 bits (82), Expect = 0.11
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 22/150 (14%)
Query: 488 TVYNSEIIPATLQWTTDSGNILKETMTVTFAEGN------SPGESITTKVETNQTRGSLS 541
T S P++ T + +L T T T A G+ +PG + TTKV T T G
Sbjct: 5017 TATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTG--- 5073
Query: 542 PEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSA 601
++ S P G L P T+P + + + ++ P ++ + + T +
Sbjct: 5074 ------FTATPSSSP-------GTALTPPTTTPMSTMSTIHTSSTPETTHTSTVLTTTAT 5120
Query: 602 VMNNNSLLLGQSHSLQRDTCLTQNNSTAST 631
+ + S +L LT+ +TA+T
Sbjct: 5121 MTRATNSTATPSSTLGTTRILTELTTTATT 5150
Score = 33.1 bits (74), Expect = 0.93
Identities = 52/231 (22%), Positives = 84/231 (36%), Gaps = 42/231 (18%)
Query: 488 TVYNSEIIPATLQWTTDSGNILKETMTVTFAEGN------SPGESITTKVETNQTRGSLS 541
T S P++ T + +L T T T A G+ +PG + TTKV T T G +
Sbjct: 3842 TATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTA 3901
Query: 542 PEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSA 601
T S ++ P ++ T+P + V+ ++ P ++ + + T +
Sbjct: 3902 ---TPSSSPGTALTPPVWISTT--------TTPTTRGSTVTPSSIPGTTHTATVLTTTTT 3950
Query: 602 VMNNNSLLLGQSHSLQRDTCLTQ--NNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGN 659
+ S+ S + T T N+TA+T G P + V T
Sbjct: 3951 TVATGSMATPSSSTQTSGTTHTPPVPNTTATTHGRSLPP-----SSPHTVRTAWTSATSG 4005
Query: 660 LEGTVHRILLGDVQTIPIQIIDNHSALIEENPESTISVSQVKQEPKEPALS 710
+ GT H I S + P +T S +Q PALS
Sbjct: 4006 ILGTTH--------------ITEPSTVTSHTPAATTSTTQ----HSTPALS 4038
Score = 31.6 bits (70), Expect = 2.7
Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 21/160 (13%)
Query: 488 TVYNSEIIPATLQWTTDSGNILKETMTVTFAEGN------SPGESITTKVETNQTRG-SL 540
T S P++ T + +L T T T A G+ +PG + TTKV T T G ++
Sbjct: 4344 TATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTV 4403
Query: 541 SPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGS 600
+P S ++ P ++ T+P S + V+ ++ P ++ + + T +
Sbjct: 4404 TPSS----SPGTARTPPVWISTT--------TTPTTSGSTVTPSSVPGTTHTPTVLTTTT 4451
Query: 601 AVMNNNSLLLGQSHSLQRDTCLTQ--NNSTASTMGNLPEP 638
+ S+ S + T T N+TA+T G P
Sbjct: 4452 TTVATGSMATPSSSTQTSGTTHTPPVPNTTATTHGRSLSP 4491
Score = 30.0 bits (66), Expect = 7.9
Identities = 41/186 (22%), Positives = 70/186 (37%), Gaps = 24/186 (12%)
Query: 488 TVYNSEIIPATLQWTTDSGNILKETMTVTFAEGN------SPGESITTKVETNQTRGSLS 541
T S P++ T + +L T T T A G+ +PG + TTKV T T G +
Sbjct: 2695 TATMSTATPSSTPETAHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTA 2754
Query: 542 PEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSA 601
T S ++ P ++ T+P + V+ ++ P ++ + + T +
Sbjct: 2755 ---TPSSSPGTALTPPVWISTT--------TTPTTRGSTVTPSSIPGTTHTATVLTTTTT 2803
Query: 602 VMNNNSLLLGQSHSLQRDTCLTQ--NNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGN 659
+ S+ S + T T N+ A+T G P + V T
Sbjct: 2804 TVATGSMATPSSSTQTSGTTHTPPVPNTMATTHGRSLPP-----SSPHTVRTAWTSATSG 2858
Query: 660 LEGTVH 665
+ GT H
Sbjct: 2859 ILGTTH 2864
>gi|31543535 R3H domain containing 1 [Homo sapiens]
Length = 1099
Score = 36.2 bits (82), Expect = 0.11
Identities = 58/246 (23%), Positives = 91/246 (36%), Gaps = 56/246 (22%)
Query: 56 NSLISQNIPGPLTQT--QTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQ 113
NS ++Q +P P QT Q + +Q QN Q I + + +Q ++ P G
Sbjct: 668 NSHLNQPLPQPAQQTGYQVIPNQQ-----QNYQGIV----GVQQPQSQSLVSGQPNSIGN 718
Query: 114 VLR--VIPPTQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRN---LPTVRVDTL------ 162
++ VIP T QV +PQG + P P+ N +PT +
Sbjct: 719 QIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPP 778
Query: 163 -----ADNTSNYILHP---QTSFPL-------------------PKKSVTGMLEEPLLGP 195
++ Y+ HP Q FP P GM+ L P
Sbjct: 779 GQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLSVP 838
Query: 196 LQPLSS--NTPIWACRLRSCEKIGDSYRGY-CVSETELESVLTFHKQQTQSVWGTRQSPS 252
P S + P W C D RG CV + +++++ Q + + QSP+
Sbjct: 839 NNPQSCAHSPPQWKQNKYYC----DHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPA 894
Query: 253 PAKPAT 258
PA+ +T
Sbjct: 895 PAQLST 900
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 35.8 bits (81), Expect = 0.14
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 381 ELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQVAHKIQELVSQGIEQVYAVR 440
ELET L V S EEE A+ D RL + A K+ EL + +++ A++
Sbjct: 1600 ELETKKKELEHVNLSVKSKEEELKALED-------RLESESAAKLAELKRKAEQKIAAIK 1652
Query: 441 KQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQKSLRNGDTVYNSEII 495
KQL +E + + + E H + + + +H +++ L++ ++ + +I
Sbjct: 1653 KQLLSQMEEKEEQYKKGTESHLSELNTKLQEREREVHILEEKLKSVESSQSETLI 1707
>gi|148596992 heart alpha-kinase [Homo sapiens]
Length = 2170
Score = 35.0 bits (79), Expect = 0.25
Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 624 QNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNLEGTVHRILLGDVQTIPIQI---- 679
+ S + G P + +E+ + +G+L V + +L V + +++
Sbjct: 1687 REKSLEARAGKSPGTLTAVTGSEEVKRKPEAPGSGHLAEGVKKKILSRVAALRLKLEEKE 1746
Query: 680 -IDNHSALIEENP--ESTISVSQVKQEPKEPALSMEAKKTVDYKKLSA 724
I +SA +++ P E+++S ++ KQ+PK+P+ E + V KK+ A
Sbjct: 1747 NIRKNSAFLKKMPKLETSLSHTEEKQDPKKPSCKREGRAPVLLKKIQA 1794
>gi|38569491 serine/threonine-protein kinase QSK [Homo sapiens]
Length = 1263
Score = 34.7 bits (78), Expect = 0.32
Identities = 64/303 (21%), Positives = 125/303 (41%), Gaps = 43/303 (14%)
Query: 369 VQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQVAHKIQEL 428
+QL QQ + +P +T++P+ V+ ++EE + + A+ S +K
Sbjct: 499 IQLHAQQLLKRPRGPSPLVTMTPAVPAVTPVDEESSDGEPDQEAVQSS-----TYKDSNT 553
Query: 429 VSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQKSLRNGDT 488
+ E+ VR+ + FK +N S + ++ ++QK
Sbjct: 554 LHLPTERFSPVRRFSDGAASIQAFKAHLEKMGNNSS----IKQLQQECEQLQK------- 602
Query: 489 VYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSL-SPEPTHL 547
+Y +I TL+ T + ++ ++ Q + S+ P+P+
Sbjct: 603 MYGGQIDERTLEKTQQQHMLYQQEQ--------------HHQILQQQIQDSICPPQPSPP 648
Query: 548 LSSLSSFQPKIFT-QLQGLQLQPRYTSPDESPAVVSVNNQPSSSP----SGLLDTIGSAV 602
L + QP + T QLQ L++QP +SP + + QPS+SP S ++ G+A
Sbjct: 649 LQAACENQPALLTHQLQRLRIQP--SSPPPNHPNNHLFRQPSNSPPPMSSAMIQPHGAAS 706
Query: 603 MNNNSLLLGQSHSLQR--DTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNL 660
+ L +S Q+ + C + N + +G + +P Q+ ++ E V+ N+
Sbjct: 707 SSQFQGLPSRSAIFQQQPENCSSPPNVALTCLG-MQQPAQSQQVTIQVQE--PVDMLSNM 763
Query: 661 EGT 663
GT
Sbjct: 764 PGT 766
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 34.3 bits (77), Expect = 0.42
Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 14/159 (8%)
Query: 488 TVYNSEIIPATLQWTTDSGNILKETMTVTFAEGN------SPGESITTKVETNQTRGSLS 541
T S P++ T + +L T T T A G+ +PG + TTKV T T G +
Sbjct: 4547 TATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTA 4606
Query: 542 PEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSA 601
T S ++ P ++ P T+P S + V+ ++ P ++ + + T +
Sbjct: 4607 ---TPSSSPGTALTPPVWI---STTTTPTTTTPTTSGSTVTPSSIPGTTHTARVLTTTTT 4660
Query: 602 VMNNNSLLLGQSHSLQRDT--CLTQNNSTASTMGNLPEP 638
+ S+ S + T LT +T + G+ P
Sbjct: 4661 TVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNP 4699
Score = 30.0 bits (66), Expect = 7.9
Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 19/159 (11%)
Query: 488 TVYNSEIIPATLQWTTDSGNILKETMTVTFAEGN------SPGESITTKVETNQTRGSLS 541
T S P++ T + +L T T T A G+ +PG + TTKV T T G +
Sbjct: 2005 TATMSTATPSSTPETAHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTA 2064
Query: 542 PEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSA 601
T S ++ P ++ T+P + V+ ++ P ++ + + T +
Sbjct: 2065 ---TPSSSPGTALTPPVWISTT--------TTPTTRGSTVTPSSIPGTTHTATVLTTTTT 2113
Query: 602 VMNNNSLLLGQSHSLQRDT--CLTQNNSTASTMGNLPEP 638
+ S+ S + T LT +T + G+ P
Sbjct: 2114 TVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNP 2152
Score = 30.0 bits (66), Expect = 7.9
Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 19/159 (11%)
Query: 488 TVYNSEIIPATLQWTTDSGNILKETMTVTFAEGN------SPGESITTKVETNQTRGSLS 541
T S P++ T + +L T T T A G+ +PG + TTKV T T G +
Sbjct: 3262 TATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTA 3321
Query: 542 PEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSA 601
T S ++ P ++ T+P + V+ ++ P ++ + + T +
Sbjct: 3322 ---TPSSSPGTALTPPVWISTT--------TTPTTRGSTVTPSSIPGTTHTATVLTTTTT 3370
Query: 602 VMNNNSLLLGQSHSLQRDT--CLTQNNSTASTMGNLPEP 638
+ S+ S + T LT +T + G+ P
Sbjct: 3371 TVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNP 3409
>gi|45505139 phosphoinositide-3-kinase adaptor protein 1 [Homo
sapiens]
Length = 805
Score = 33.9 bits (76), Expect = 0.55
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 20/112 (17%)
Query: 394 FPVSSLEEEETAVRDENCALPSRLHPQVAHKIQELVS-----QGIEQVYAVRKQLRKFVE 448
F ++ LEEE+ + LP+ LH + ++ L + G Q Y+V + +
Sbjct: 317 FGINQLEEEDMMTNQRDEELPTLLHFAAKYGLKNLTALLLTCPGALQAYSVANKHGHY-- 374
Query: 449 RELFKPDEVPERHNL--------SFFPTVNDIKNHIHEVQKSLRNGDTVYNS 492
P+ + E+H + TV+ +K+HI E D VY S
Sbjct: 375 -----PNTIAEKHGFRDLRQFIDEYVETVDMLKSHIKEELMHGEEADAVYES 421
>gi|105990535 coagulation factor V precursor [Homo sapiens]
Length = 2224
Score = 33.5 bits (75), Expect = 0.71
Identities = 50/231 (21%), Positives = 87/231 (37%), Gaps = 31/231 (13%)
Query: 368 YVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALP---SRLHPQVAHK 424
Y P Q Q H P S SP LE + + + + P S++ P H+
Sbjct: 1127 YQTFPIQDPDQMHSTSDPSHR-SSSPELSEMLEYDRS-----HKSFPTDISQMSPSSEHE 1180
Query: 425 I-QELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQKSL 483
+ Q ++S + QV + EL + + P+ + + P +
Sbjct: 1181 VWQTVISPDLSQVT---------LSPELSQTNLSPDLSHTTLSPELIQ------------ 1219
Query: 484 RNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSLSPE 543
RN I L TT S ++ T+++ ++ N E T + + LSP+
Sbjct: 1220 RNLSPALGQMPISPDLSHTTLSPDLSHTTLSLDLSQTNLSPELSQTNLSPALGQMPLSPD 1279
Query: 544 PTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGL 594
+H SL Q + +L + L P + + SPA+ + P S + L
Sbjct: 1280 LSHTTLSLDFSQTNLSPELSHMTLSPELSQTNLSPALGQMPISPDLSHTTL 1330
>gi|31541941 heat shock 70kDa protein 4-like [Homo sapiens]
Length = 839
Score = 33.1 bits (74), Expect = 0.93
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 22/147 (14%)
Query: 316 PARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQEKAFNMLKKNLVDAGGVLRWYVQLPTQQ 375
P ++Y+ K+Q+ +Y P K + E+ KA N L K +QL +
Sbjct: 670 PKQVYVDKLQELKKYGQPIQMKY---MEHEERPKALNDLGKK-----------IQLVMKV 715
Query: 376 AHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQVAHKIQELVSQGIEQ 435
Y + L P + +E+ E + D L S+++ Q + + + +
Sbjct: 716 IEAYRNKDERYDHLDP-----TEMEKVEKCISDAMSWLNSKMNAQNKLSLTQDPVVKVSE 770
Query: 436 VYAVRKQLRKFVERELFKPD---EVPE 459
+ A K+L F ++KP EVPE
Sbjct: 771 IVAKSKELDNFCNPIIYKPKPKAEVPE 797
>gi|93004081 polo-like kinase 2 [Homo sapiens]
Length = 685
Score = 32.7 bits (73), Expect = 1.2
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 387 LTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQVAHKIQELVSQGIEQVYAVRKQLRKF 446
+ L PF ++L+E +R+ +PS L H I ++S+ E R L
Sbjct: 273 MLLGRPPFETTNLKETYRCIREARYTMPSSLLAPAKHLIASMLSKNPED----RPSLDDI 328
Query: 447 VERELFKPDEVPERHNLSFFPTVND 471
+ + F P+R + S TV D
Sbjct: 329 IRHDFFLQGFTPDRLSSSCCHTVPD 353
>gi|225543461 tetratricopeptide repeat, ankyrin repeat and coiled-coil
containing 1 isoform 1 [Homo sapiens]
Length = 1861
Score = 32.3 bits (72), Expect = 1.6
Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 23/208 (11%)
Query: 420 QVAHKIQELVSQGIEQVYA---VRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHI 476
+ A K EL + E YA ++ R+FV + V PT ++K +
Sbjct: 1357 EFASKALELKPKSYEAFYARARAKRNSRQFVAALADLQEAV------KLCPTNQEVKRLL 1410
Query: 477 HEVQ---KSLRNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVET 533
V+ K L+ +PA L DS N E T T + T + ET
Sbjct: 1411 ARVEEECKQLQRSQQQKQQGPLPAPLN---DSEN---EEDTPTPGLSDHFHSEETEEEET 1464
Query: 534 NQTRGSLSPEPTHLLSSLSSFQPKIFTQ--LQGLQLQPRYTSPDESPAVVSVNNQPSSSP 591
+ S+SP P S SS P + + +GLQ + R SP + +P + P
Sbjct: 1465 SPQEESVSPTPR---SQPSSSVPSSYIRNLQEGLQSKGRPVSPQSRAGIGKSLREPVAQP 1521
Query: 592 SGLLDTIGSAVMNNNSLLLGQSHSLQRD 619
LL A + S LG S R+
Sbjct: 1522 GLLLQPSKQAQIVKTSQHLGSGQSAVRN 1549
>gi|7019405 host cell factor C2 [Homo sapiens]
Length = 792
Score = 32.3 bits (72), Expect = 1.6
Identities = 38/191 (19%), Positives = 77/191 (40%), Gaps = 10/191 (5%)
Query: 462 NLSFFPTV-NDIKNHIHEVQKSLRNGDTVYNSEIIPATLQWTTDSGNILKET-MTVTFAE 519
N +P++ ++ NH V LR + + S + L D ++ ET ++ T +
Sbjct: 461 NAILYPSLASNASNHNSHVVDMLRKNEGPHTSANV-GVLSSCLDVRTVIPETSVSSTVSS 519
Query: 520 GNSPGESITTKVETNQTRGSLSPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPA 579
+ T K E++ T G++ + T L + + + L ++ T +P
Sbjct: 520 TQTMVTQQTIKTESSSTNGAVVKDETSLTTFSTKSEVDETYALPATKISRVETHATATPF 579
Query: 580 VVSVNNQPSSS-PSGLLDTIGSAVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEP 638
+ P ++ +G + NN+ L+ Q + L + + S +GN P
Sbjct: 580 SKETPSNPVATVKAGERQWCDVGIFKNNTALVSQFYLLPK------GKQSISKVGNADVP 633
Query: 639 DQNLVAMDELV 649
D +L+ +LV
Sbjct: 634 DYSLLKKQDLV 644
>gi|5292161 proteasome 26S non-ATPase subunit 4 [Homo sapiens]
Length = 377
Score = 32.0 bits (71), Expect = 2.1
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 485 NGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSLSPEP 544
N + + N + +P LQ D+ NI+ + T + E N + T + +L+P+
Sbjct: 12 NSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENN---VGLITLANDCEVLTTLTPDT 68
Query: 545 THLLSSLSSFQPK 557
+LS L + QPK
Sbjct: 69 GRILSKLHTVQPK 81
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 31.6 bits (70), Expect = 2.7
Identities = 53/274 (19%), Positives = 98/274 (35%), Gaps = 41/274 (14%)
Query: 368 YVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQVAHKIQE 427
Y Q P+Q HQ SP+P+P ++ + P P + Q+
Sbjct: 518 YSQQPSQPPHQQ----------SPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQ 567
Query: 428 LVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLS---------FFPTVNDIKNHIHE 478
+ Q A + + ++ + P LS P++ K +
Sbjct: 568 PAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQED 627
Query: 479 VQKSLRNG-----DTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVET 533
+ SL++ D + + +P + G + ++ + E ++P +S + +
Sbjct: 628 MNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPG-VSTSGISSSQGEQSNPAQSPFSPHTS 686
Query: 534 NQTRGSLSPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSG 593
G P P+ + S S Q + S SPA V N P PSG
Sbjct: 687 PHLPGIRGPSPSPVGSPASVAQSR---------------SGPLSPAAVPGNQMPPRPPSG 731
Query: 594 LLDTIGSAVMNNNSLLLGQSHSLQRDTCLTQNNS 627
D+I MN +S+ + + +QR+ + Q +S
Sbjct: 732 QSDSIMHPSMNQSSIAQDRGY-MQRNPQMPQYSS 764
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 31.6 bits (70), Expect = 2.7
Identities = 53/274 (19%), Positives = 98/274 (35%), Gaps = 41/274 (14%)
Query: 368 YVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQVAHKIQE 427
Y Q P+Q HQ SP+P+P ++ + P P + Q+
Sbjct: 518 YSQQPSQPPHQQ----------SPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQ 567
Query: 428 LVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLS---------FFPTVNDIKNHIHE 478
+ Q A + + ++ + P LS P++ K +
Sbjct: 568 PAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQED 627
Query: 479 VQKSLRNG-----DTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVET 533
+ SL++ D + + +P + G + ++ + E ++P +S + +
Sbjct: 628 MNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPG-VSTSGISSSQGEQSNPAQSPFSPHTS 686
Query: 534 NQTRGSLSPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSG 593
G P P+ + S S Q + S SPA V N P PSG
Sbjct: 687 PHLPGIRGPSPSPVGSPASVAQSR---------------SGPLSPAAVPGNQMPPRPPSG 731
Query: 594 LLDTIGSAVMNNNSLLLGQSHSLQRDTCLTQNNS 627
D+I MN +S+ + + +QR+ + Q +S
Sbjct: 732 QSDSIMHPSMNQSSIAQDRGY-MQRNPQMPQYSS 764
>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
Length = 1603
Score = 31.6 bits (70), Expect = 2.7
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 22/133 (16%)
Query: 119 PPTQTGMAQVIIPQGQLVD------VNSPRDVPEEKP-----SNRNLPTVRVDTLADNTS 167
PP+ Q++ PQ + +D + ++P +P L +DTL D+
Sbjct: 266 PPSPEPEPQLLDPQPRFLDPQALEPLGEALELPPLQPLADPLGLPGLALQALDTLPDSLE 325
Query: 168 NYILHPQTSFPLPKKSVTGMLEEP--LLGPLQPLSSNTPIWACRLRSCEKIG----DSYR 221
+ +L PQ PLPK +L+ P L P QPL RL C G + +
Sbjct: 326 SQLLDPQALDPLPK-----LLDVPGRRLEPQQPLGHCPLAEPLRLDLCSPHGPPGPEGHP 380
Query: 222 GYCVSETELESVL 234
Y + T+ +L
Sbjct: 381 KYALRRTDRPKIL 393
>gi|50843837 hypothetical protein LOC55701 [Homo sapiens]
Length = 1519
Score = 31.2 bits (69), Expect = 3.5
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 17/145 (11%)
Query: 42 DSPTVLPITTREANNSLISQNIPGPLTQTQTLSAEQFHLVDQN------GQAIQYELQSL 95
DS + P +A++ N+P P + HLV + ++ EL++
Sbjct: 396 DSAPLSPGDKEDASHQEALGNLPSPSEH----KLPECHLVKEEYEGSGKPESEPKELKTA 451
Query: 96 GESNAQMMIVASPTENGQVLRVIP-PTQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNL 154
GE Q+ PTE G R + P MA P+G L D +P ++ N+
Sbjct: 452 GEKEPQLSEACGPTEEGAGERELEGPGLLCMAGHTGPEGPLSDTPTPPLETVQEGKGDNI 511
Query: 155 PTVRVDTLADNTSNYILHPQTSFPL 179
P + LA + S+ HP ++ L
Sbjct: 512 PE---EALAVSVSD---HPDVAWDL 530
>gi|112363100 SLIT-ROBO Rho GTPase activating protein 2 isoform a
[Homo sapiens]
Length = 1071
Score = 31.2 bits (69), Expect = 3.5
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 402 EETAVRDENCALPSRLHPQVAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERH 461
E+ D+ C L Q+ +Q+ + E + L K ER L K ++
Sbjct: 30 EQMKCLDQQC----ELRVQLLQDLQDFFRKKAEIEMDYSRNLEKLAERFLAKTRSTKDQQ 85
Query: 462 ---NLSFFPTVNDIKNHIHEVQKSLRNGDT---VYNSEIIPATLQWTTDSGNILKETMTV 515
+ + VN +++V++ R+ T +Y + IIP +Q + DSG + K++ V
Sbjct: 86 FKKDQNVLSPVNCWNLLLNQVKRESRDHTTLSDIYLNNIIPRFVQVSEDSGRLFKKSKEV 145
>gi|112363096 SLIT-ROBO Rho GTPase activating protein 2 isoform b
[Homo sapiens]
Length = 836
Score = 31.2 bits (69), Expect = 3.5
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 402 EETAVRDENCALPSRLHPQVAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERH 461
E+ D+ C L Q+ +Q+ + E + L K ER L K ++
Sbjct: 30 EQMKCLDQQC----ELRVQLLQDLQDFFRKKAEIEMDYSRNLEKLAERFLAKTRSTKDQQ 85
Query: 462 ---NLSFFPTVNDIKNHIHEVQKSLRNGDT---VYNSEIIPATLQWTTDSGNILKETMTV 515
+ + VN +++V++ R+ T +Y + IIP +Q + DSG + K++ V
Sbjct: 86 FKKDQNVLSPVNCWNLLLNQVKRESRDHTTLSDIYLNNIIPRFVQVSEDSGRLFKKSKEV 145
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 30.8 bits (68), Expect = 4.6
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 11/202 (5%)
Query: 502 TTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSLSPEPTHLLSSLSS---FQPKI 558
TT + T++ T + NSP + +T++ ++ T + PT S S+ P
Sbjct: 2524 TTPVASPEASTLSTTPVDSNSPVVT-STEISSSATSAEGTSMPTSTYSEGSTPLRSMPVS 2582
Query: 559 FTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSAVMNNNSLLLGQSHSLQR 618
L + T+P ++ V+ + + SSSP+ DT S ++ S + S+
Sbjct: 2583 TKPLASSEASTLSTTPVDTSIPVTTSTETSSSPTTAKDT--SMPISTPSEVSTSLTSILV 2640
Query: 619 DTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNLEGTVHRILLGDVQTIPIQ 678
T + +S AST+ P + LV G EG+ ++ P+
Sbjct: 2641 ST-MPVASSEASTLSTTPVDTRTLVT----TSTGTSSSPTTAEGSSMPTSTPGERSTPLT 2695
Query: 679 IIDNHSALIEENPESTISVSQV 700
I + L+ + ST+S + V
Sbjct: 2696 NILVSTTLLANSEASTLSTTPV 2717
>gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]
Length = 1630
Score = 30.4 bits (67), Expect = 6.0
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 112 GQVLRVIPPTQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTL 162
G+ LR PP + I+ L +N +V +++ +N +LP + TL
Sbjct: 1099 GETLRSNPPPSLAITPTILKSVNLRSINKSEEVKQKEENNTDLPYLEESTL 1149
>gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens]
Length = 1474
Score = 30.4 bits (67), Expect = 6.0
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 112 GQVLRVIPPTQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTL 162
G+ LR PP + I+ L +N +V +++ +N +LP + TL
Sbjct: 943 GETLRSNPPPSLAITPTILKSVNLRSINKSEEVKQKEENNTDLPYLEESTL 993
>gi|31657094 anillin, actin binding protein [Homo sapiens]
Length = 1124
Score = 30.4 bits (67), Expect = 6.0
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 195 PLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQTQSVWGTRQSPSPA 254
PL S+ P+ +SC K S + C TE+E +KQ +S SPSP
Sbjct: 43 PLSEASNQQPLSGGEEKSCTKPSPSKKR-CSDNTEVEVSNLENKQPVESTSAKSCSPSPV 101
Query: 255 KP 256
P
Sbjct: 102 SP 103
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
sapiens]
Length = 1341
Score = 30.0 bits (66), Expect = 7.9
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 19/96 (19%)
Query: 119 PPTQTGMAQVIIPQ------GQLVDVNSPRDVPEEKPSNRN-----LPTVRVDTLADNTS 167
P T ++++ Q G L ++SP D E P+ + LP V+ TLAD ++
Sbjct: 455 PNTDADTRELLVSQHTVQLVGGLSPLSSPSDTKAESPAEKVPEESVLPLVQKSTLADYSA 514
Query: 168 NYILHPQ---TSFPLPKK-----SVTGMLEEPLLGP 195
L P+ ++ PLP K G+ EE L P
Sbjct: 515 QKDLEPESDRSAQPLPLKIEELALAKGITEECLKQP 550
>gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]
Length = 861
Score = 30.0 bits (66), Expect = 7.9
Identities = 47/168 (27%), Positives = 66/168 (39%), Gaps = 28/168 (16%)
Query: 492 SEIIPATLQWTTDSGNILKETM---TVTFAEGNSPGESITTKVETNQTRGSLSPEPTHLL 548
S IP + T G ++ + TF +SPG + TT++ N T L T +
Sbjct: 195 SHSIPGSTDTTLSPGTTTPSSLGPESTTFH--SSPGYTKTTRLPDNTTTSGLLEASTPVH 252
Query: 549 SSLSS----FQPKIFTQLQG--LQLQPRYTSPDESP-------AVVSVNNQPSSSPSGLL 595
SS S P T +G Q +S D SP A V ++ SSPS
Sbjct: 253 SSTGSPHTTLSPSSSTTHEGEPTTFQSWPSSKDTSPAPSGTTSAFVKLSTTYHSSPSSTP 312
Query: 596 DTIGSAVMNNNSLLLGQS------HSLQRDTCLTQNNSTASTMGNLPE 637
T SA +S LG S HS T T + ++T G++ E
Sbjct: 313 TTHFSA----SSTTLGHSEESTPVHSSPVATATTPPPARSATSGHVEE 356
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 30.0 bits (66), Expect = 7.9
Identities = 47/168 (27%), Positives = 66/168 (39%), Gaps = 28/168 (16%)
Query: 492 SEIIPATLQWTTDSGNILKETM---TVTFAEGNSPGESITTKVETNQTRGSLSPEPTHLL 548
S IP + T G ++ + TF +SPG + TT++ N T L T +
Sbjct: 339 SHSIPGSTDTTLSPGTTTPSSLGPESTTFH--SSPGYTKTTRLPDNTTTSGLLEASTPVH 396
Query: 549 SSLSS----FQPKIFTQLQG--LQLQPRYTSPDESP-------AVVSVNNQPSSSPSGLL 595
SS S P T +G Q +S D SP A V ++ SSPS
Sbjct: 397 SSTGSPHTTLSPSSSTTHEGEPTTFQSWPSSKDTSPAPSGTTSAFVKLSTTYHSSPSSTP 456
Query: 596 DTIGSAVMNNNSLLLGQS------HSLQRDTCLTQNNSTASTMGNLPE 637
T SA +S LG S HS T T + ++T G++ E
Sbjct: 457 TTHFSA----SSTTLGHSEESTPVHSSPVATATTPPPARSATSGHVEE 500
Score = 30.0 bits (66), Expect = 7.9
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 15/143 (10%)
Query: 491 NSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSLSPEPTHLLSS 550
+S + PA+ TT G L E T ++ +SPG + TT + T EPT S
Sbjct: 2840 HSTVSPAS---TTTPG--LSEESTTVYS--SSPGSTETTVFPRSTTTSVRGEEPTTFHSR 2892
Query: 551 LSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSAVMNNNSLLL 610
+S +FT+ T+ + + P+S+ +GL T+ +A + S
Sbjct: 2893 PASTHTTLFTE--------DSTTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTF 2944
Query: 611 GQSHSLQRDTCLTQNNSTASTMG 633
S T ++T+ +G
Sbjct: 2945 PSSSGSTGTTLSPARSTTSGLVG 2967
>gi|219802034 nuclear factor related to kappaB binding protein isoform
1 [Homo sapiens]
Length = 1299
Score = 30.0 bits (66), Expect = 7.9
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 49 ITTREANNSLISQNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQ 101
+TT A LI+ N P L+A+Q + Q GQA Q +Q++ S+ Q
Sbjct: 1223 LTTMPAGTKLIAGNKP-----VSFLTAQQLQQLQQQGQATQVRIQTVPASHLQ 1270
>gi|23346420 nuclear factor related to kappaB binding protein isoform
2 [Homo sapiens]
Length = 1324
Score = 30.0 bits (66), Expect = 7.9
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 49 ITTREANNSLISQNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQ 101
+TT A LI+ N P L+A+Q + Q GQA Q +Q++ S+ Q
Sbjct: 1248 LTTMPAGTKLIAGNKP-----VSFLTAQQLQQLQQQGQATQVRIQTVPASHLQ 1295
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,323,582
Number of Sequences: 37866
Number of extensions: 1441892
Number of successful extensions: 3618
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 3571
Number of HSP's gapped (non-prelim): 84
length of query: 725
length of database: 18,247,518
effective HSP length: 110
effective length of query: 615
effective length of database: 14,082,258
effective search space: 8660588670
effective search space used: 8660588670
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.