Guide to the Human Genome
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Name: C14orf73 Sequence: fasta or formatted (722aa) NCBI GI: 117938266
Description:

hypothetical protein LOC91828

Referenced in:

TNF and Related Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.3         96           3
 C cysteine            1.4         10           1
 D aspartate           4.6         33           2
 E glutamate           8.6         62           3
 F phenylalanine       3.5         25           1
 G glycine             6.1         44           2
 H histidine           2.5         18           1
 I isoleucine          2.6         19           1
 K lysine              2.4         17           1
 L leucine            12.3         89           2
 M methionine          1.4         10           1
 N asparagine          0.8          6           1
 P proline             5.5         40           2
 Q glutamine           6.4         46           2
 R arginine            9.1         66           2
 S serine              6.2         45           2
 T threonine           4.7         34           2
 V valine              5.7         41           2
 W tryptophan          1.4         10           1
 Y tyrosine            1.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC91828 
TNFAIP2               0.089   tumor necrosis factor, alpha-induced protein 2 [Homo...
EXOC3                 0.087   Sec6 protein 
EXOC3L                0.067   exocyst complex component 3-like 
EXOC3L2               0.062   exocyst complex component 3-like 2 
FLJ37078              0.006   hypothetical protein LOC222183 
ACIN1                 0.006   apoptotic chromatin condensation inducer 1 
IPO7                  0.006   importin 7 
LOC652794             0.005   PREDICTED: similar to tektin 4 
EEF1D                 0.005   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.005   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.005   eukaryotic translation elongation factor 1 delta iso...
MDC1                  0.005   mediator of DNA-damage checkpoint 1 
TRIP12                0.005   thyroid hormone receptor interactor 12 
CELSR3                0.005   cadherin EGF LAG seven-pass G-type receptor 3 [Homo...
AKAP13                0.005   A-kinase anchor protein 13 isoform 1 
AKAP13                0.005   A-kinase anchor protein 13 isoform 2 
SYNJ1                 0.004   synaptojanin 1 isoform a 
SYNJ1                 0.004   synaptojanin 1 isoform b 
WIPF1                 0.004   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.004   WAS/WASL interacting protein family, member 1 
SNAP47                0.004   synaptosomal-associated protein, 47kDa 
CRYBG3                0.004   beta-gamma crystallin domain containing 3 
MUPCDH                0.004   mucin and cadherin-like isoform 1 
RILP                  0.004   Rab interacting lysosomal protein 
REPS1                 0.004   RALBP1 associated Eps domain containing 1 isoform a...
REPS1                 0.004   RALBP1 associated Eps domain containing 1 isoform b...
SRRM1                 0.004   serine/arginine repetitive matrix 1 
C7orf51               0.004   hypothetical protein FLJ37538 
TAF5                  0.004   TBP-associated factor 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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