Guide to the Human Genome
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Name: EXOC3 Sequence: fasta or formatted (745aa) NCBI GI: 31083351
Description:

Sec6 protein

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         50           3
 C cysteine            1.1          8           1
 D aspartate           6.6         49           2
 E glutamate           8.3         62           2
 F phenylalanine       2.4         18           1
 G glycine             3.5         26           1
 H histidine           1.9         14           1
 I isoleucine          5.2         39           2
 K lysine              7.0         52           2
 L leucine            11.4         85           2
 M methionine          3.4         25           2
 N asparagine          3.2         24           2
 P proline             3.2         24           2
 Q glutamine           5.8         43           2
 R arginine            6.6         49           3
 S serine              5.9         44           1
 T threonine           5.4         40           2
 V valine              8.3         62           3
 W tryptophan          1.1          8           1
 Y tyrosine            3.1         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Sec6 protein 
EXOC3L                0.214   exocyst complex component 3-like 
C14orf73              0.084   hypothetical protein LOC91828 
TNFAIP2               0.084   tumor necrosis factor, alpha-induced protein 2 [Homo...
EXOC3L2               0.075   exocyst complex component 3-like 2 
SPTBN1                0.014   spectrin, beta, non-erythrocytic 1 isoform 2 
SPTBN1                0.014   spectrin, beta, non-erythrocytic 1 isoform 1 
LRRFIP1               0.010   leucine rich repeat (in FLII) interacting protein 1...
CENPE                 0.010   centromere protein E 
C6orf174              0.008   hypothetical protein LOC387104 
TRIM3                 0.008   tripartite motif-containing 3 
TRIM3                 0.008   tripartite motif-containing 3 
RRBP1                 0.008   ribosome binding protein 1 
RRBP1                 0.008   ribosome binding protein 1 
EPS15                 0.007   epidermal growth factor receptor pathway substrate ...
EPS15                 0.007   epidermal growth factor receptor pathway substrate 15...
GOLGA4                0.006   golgi autoantigen, golgin subfamily a, 4 
MYH9                  0.006   myosin, heavy polypeptide 9, non-muscle 
COLEC12               0.006   collectin sub-family member 12 
RNF40                 0.006   ring finger protein 40 
KTN1                  0.006   kinectin 1 isoform b 
FLJ37396              0.006   PREDICTED: hypothetical protein LOC285754 
FLJ37396              0.006   PREDICTED: hypothetical protein LOC285754 
FLJ37396              0.006   PREDICTED: hypothetical protein LOC285754 
MYH13                 0.006   myosin, heavy polypeptide 13, skeletal muscle [Homo...
ERC2                  0.006   cytomatrix protein p110 
PRPH                  0.006   peripherin 
GPC4                  0.006   glypican 4 
MAD1L1                0.006   MAD1-like 1 protein 
MAD1L1                0.006   MAD1-like 1 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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