Guide to the Human Genome
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Name: EXOC3L2 Sequence: fasta or formatted (409aa) NCBI GI: 226371708
Description:

exocyst complex component 3-like 2

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.2         46           2
 C cysteine            2.2          9           2
 D aspartate           4.4         18           1
 E glutamate           8.8         36           2
 F phenylalanine       2.7         11           2
 G glycine             4.6         19           2
 H histidine           2.4         10           1
 I isoleucine          2.2          9           1
 K lysine              1.2          5           1
 L leucine            15.4         63           2
 M methionine          1.5          6           1
 N asparagine          1.5          6           1
 P proline             7.6         31           2
 Q glutamine           5.1         21           2
 R arginine           12.2         50           2
 S serine              6.1         25           2
 T threonine           2.7         11           1
 V valine              6.4         26           2
 W tryptophan          0.7          3           1
 Y tyrosine            1.0          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   exocyst complex component 3-like 2 
EXOC3L                0.160   exocyst complex component 3-like 
EXOC3                 0.138   Sec6 protein 
TNFAIP2               0.116   tumor necrosis factor, alpha-induced protein 2 [Homo...
C14orf73              0.110   hypothetical protein LOC91828 
MYO7B                 0.018   myosin VIIB 
TUBGCP6               0.010   tubulin, gamma complex associated protein 6 
MYH7B                 0.009   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
B4GALNT4              0.008   beta 1,4-N-acetylgalactosaminyltransferase-transfera...
C1orf127              0.006   hypothetical protein LOC148345 
CDAN1                 0.006   codanin 1 
LOC100131892          0.006   PREDICTED: hypothetical protein 
LOC100131009          0.006   PREDICTED: hypothetical protein 
LOC100131009          0.006   PREDICTED: hypothetical protein 
LOC100131892          0.006   PREDICTED: hypothetical protein 
LRRCC1                0.006   sodium channel associated protein 2 isoform b [Homo...
LRRCC1                0.006   sodium channel associated protein 2 isoform a [Homo...
TRIM40                0.006   tripartite motif-containing 40 
EME1                  0.006   essential meiotic endonuclease 1 homolog 1 
LRRC27                0.006   leucine rich repeat containing 27 isoform a 
LRRC27                0.006   leucine rich repeat containing 27 isoform a 
CCDC42B               0.005   coiled-coil domain containing 42B 
REST                  0.005   RE1-silencing transcription factor 
ZNF688                0.005   zinc finger protein 688 isoform a 
PLCB1                 0.005   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB1                 0.005   phosphoinositide-specific phospholipase C beta 1 iso...
LOC729832             0.005   PREDICTED: hypothetical protein 
LOC729832             0.005   PREDICTED: hypothetical protein 
LOC729832             0.005   PREDICTED: hypothetical protein 
LOC100287930          0.005   PREDICTED: hypothetical protein XP_002342772 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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