Guide to the Human Genome
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Name: EXOC3L Sequence: fasta or formatted (746aa) NCBI GI: 106879204
Description:

exocyst complex component 3-like

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.3         99           3
 C cysteine            1.3         10           2
 D aspartate           3.1         23           1
 E glutamate           8.2         61           2
 F phenylalanine       2.3         17           1
 G glycine             6.0         45           2
 H histidine           2.3         17           1
 I isoleucine          1.3         10           1
 K lysine              0.9          7           1
 L leucine            17.6        131           3
 M methionine          1.3         10           2
 N asparagine          1.5         11           1
 P proline             6.2         46           2
 Q glutamine           7.6         57           2
 R arginine            7.6         57           2
 S serine              7.2         54           3
 T threonine           2.5         19           2
 V valine              6.4         48           2
 W tryptophan          1.6         12           1
 Y tyrosine            1.6         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   exocyst complex component 3-like 
EXOC3                 0.215   Sec6 protein 
EXOC3L2               0.087   exocyst complex component 3-like 2 
TNFAIP2               0.085   tumor necrosis factor, alpha-induced protein 2 [Homo...
C14orf73              0.066   hypothetical protein LOC91828 
LOC402160             0.007   PREDICTED: similar to hCG18094 
LOC402160             0.007   PREDICTED: similar to hCG18094 
LOC402160             0.007   PREDICTED: similar to hCG18094 
TNIP1                 0.006   TNFAIP3 interacting protein 1 
LOC100292175          0.006   PREDICTED: hypothetical protein 
PELP1                 0.006   proline, glutamic acid and leucine rich protein 1 [...
EXD3                  0.006   exonuclease 3'-5' domain containing 3 
LAMA5                 0.006   laminin alpha 5 
FBF1                  0.006   Fas (TNFRSF6) binding factor 1 
DFFA                  0.005   DNA fragmentation factor, 45kDa, alpha polypeptide is...
DFFA                  0.005   DNA fragmentation factor, 45kDa, alpha polypeptide i...
IRGQ                  0.005   immunity-related GTPase family, Q 
QTRTD1                0.005   queuine tRNA-ribosyltransferase domain containing 1 ...
LAMB2                 0.005   laminin, beta 2 precursor 
CARD11                0.005   caspase recruitment domain family, member 11 
EXTL1                 0.004   exostoses-like 1 
FKBP15                0.004   FK506 binding protein 15, 133kDa 
BIRC6                 0.003   baculoviral IAP repeat-containing 6 
SPTBN4                0.003   spectrin, beta, non-erythrocytic 4 isoform sigma1 [...
CEP250                0.003   centrosomal protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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