Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MYOZ1 Sequence: fasta or formatted (299aa) NCBI GI: 10864053
Description:

myozenin 1

Referenced in:

Muscle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         17           2
 C cysteine            0.0          0           0
 D aspartate           4.0         12           1
 E glutamate           5.7         17           2
 F phenylalanine       3.7         11           1
 G glycine            16.1         48           3
 H histidine           1.7          5           2
 I isoleucine          3.0          9           1
 K lysine              6.7         20           2
 L leucine             8.7         26           2
 M methionine          3.7         11           1
 N asparagine          3.7         11           1
 P proline             6.4         19           1
 Q glutamine           5.0         15           2
 R arginine            4.0         12           1
 S serine              9.7         29           2
 T threonine           4.7         14           1
 V valine              3.7         11           1
 W tryptophan          0.7          2           1
 Y tyrosine            3.3         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myozenin 1 
MYOZ2                 0.188   myozenin 2 
MYOZ3                 0.092   myozenin 3 
MYOZ3                 0.092   myozenin 3 
FUS                   0.055   fusion (involved in t(12;16) in malignant liposarcoma...
KRT9                  0.053   keratin 9 
HNRNPA3               0.053   heterogeneous nuclear ribonucleoprotein A3 
KRT1                  0.051   keratin 1 
IRS4                  0.050   insulin receptor substrate 4 
TAF15                 0.048   TBP-associated factor 15 isoform 2 
TAF15                 0.048   TBP-associated factor 15 isoform 1 
KRT10                 0.046   keratin 10 
FAM98B                0.046   family with sequence similarity 98, member B isofor...
KRT2                  0.046   keratin 2 
LOC100128960          0.043   PREDICTED: similar to paraneoplastic antigen MA2 [H...
LOC100128960          0.043   PREDICTED: similar to Putative paraneoplastic antig...
HNRNPA1               0.041   heterogeneous nuclear ribonucleoprotein A1 isoform b...
KRT3                  0.041   keratin 3 
LOR                   0.039   loricrin 
HRNR                  0.038   hornerin 
FLG2                  0.036   filaggrin family member 2 
ZIC2                  0.036   zinc finger protein of the cerebellum 2 
FAM98A                0.036   hypothetical protein LOC25940 
DMKN                  0.034   dermokine isoform 4 precursor 
DMKN                  0.034   dermokine isoform 5 precursor 
DMKN                  0.034   dermokine isoform 3 precursor 
DMKN                  0.034   dermokine isoform 2 precursor 
DHX9                  0.034   DEAH (Asp-Glu-Ala-His) box polypeptide 9 
GAR1                  0.034   nucleolar protein family A, member 1 
GAR1                  0.034   nucleolar protein family A, member 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press