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Search of human proteins with 10835051
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10835051 cysteinyl-tRNA synthetase isoform b [Homo sapiens]
(748 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10835051 cysteinyl-tRNA synthetase isoform b [Homo sapiens] 1516 0.0
gi|62240992 cysteinyl-tRNA synthetase isoform c [Homo sapiens] 1501 0.0
gi|62240994 cysteinyl-tRNA synthetase isoform d [Homo sapiens] 1436 0.0
gi|21269877 cysteinyl-tRNA synthetase isoform a [Homo sapiens] 1429 0.0
gi|13375695 cysteinyl-tRNA synthetase 2, mitochondrial [Homo sap... 241 2e-63
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo... 45 2e-04
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo... 45 2e-04
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 43 0.001
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 42 0.002
gi|15149465 caldesmon 1 isoform 5 [Homo sapiens] 42 0.003
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens] 42 0.003
gi|15149467 caldesmon 1 isoform 3 [Homo sapiens] 42 0.003
gi|4826657 caldesmon 1 isoform 2 [Homo sapiens] 42 0.003
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 42 0.003
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 41 0.004
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 41 0.004
gi|71061468 centromere protein E [Homo sapiens] 41 0.004
gi|22035606 mitogen-activated protein kinase kinase kinase kinas... 41 0.004
gi|22035602 mitogen-activated protein kinase kinase kinase kinas... 41 0.004
gi|22035604 mitogen-activated protein kinase kinase kinase kinas... 41 0.004
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 41 0.005
gi|12711676 UPF3 regulator of nonsense transcripts homolog A iso... 40 0.010
gi|18375525 UPF3 regulator of nonsense transcripts homolog A iso... 40 0.010
gi|15826852 acyl-Coenzyme A binding domain containing 3 [Homo sa... 39 0.013
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 39 0.013
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 39 0.013
gi|108773810 leucyl-tRNA synthetase [Homo sapiens] 39 0.018
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 39 0.018
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 39 0.023
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 38 0.030
>gi|10835051 cysteinyl-tRNA synthetase isoform b [Homo sapiens]
Length = 748
Score = 1516 bits (3926), Expect = 0.0
Identities = 748/748 (100%), Positives = 748/748 (100%)
Query: 1 MADSSGQQGKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVY 60
MADSSGQQGKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVY
Sbjct: 1 MADSSGQQGKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVY 60
Query: 61 DASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRP 120
DASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRP
Sbjct: 61 DASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRP 120
Query: 121 EAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVN 180
EAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVN
Sbjct: 121 EAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVN 180
Query: 181 SCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTR 240
SCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTR
Sbjct: 181 SCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTR 240
Query: 241 VSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEG 300
VSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEG
Sbjct: 241 VSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEG 300
Query: 301 EGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASM 360
EGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASM
Sbjct: 301 EGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASM 360
Query: 361 DIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDA 420
DIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDA
Sbjct: 361 DIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDA 420
Query: 421 LKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQF 480
LKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQF
Sbjct: 421 LKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQF 480
Query: 481 EKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPN 540
EKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPN
Sbjct: 481 EKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPN 540
Query: 541 QALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRK 600
QALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRK
Sbjct: 541 QALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRK 600
Query: 601 IAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEE 660
IAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEE
Sbjct: 601 IAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEE 660
Query: 661 KRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQ 720
KRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQ
Sbjct: 661 KRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQ 720
Query: 721 AKKLKKLFEAQEKLYKEYLQMAQNGSFQ 748
AKKLKKLFEAQEKLYKEYLQMAQNGSFQ
Sbjct: 721 AKKLKKLFEAQEKLYKEYLQMAQNGSFQ 748
>gi|62240992 cysteinyl-tRNA synthetase isoform c [Homo sapiens]
Length = 831
Score = 1501 bits (3885), Expect = 0.0
Identities = 740/742 (99%), Positives = 740/742 (99%)
Query: 7 QQGKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMG 66
Q KGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMG
Sbjct: 90 QASKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMG 149
Query: 67 HARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQLL 126
HARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQLL
Sbjct: 150 HARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQLL 209
Query: 127 EDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVL 186
EDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVL
Sbjct: 210 EDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVL 269
Query: 187 LEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVP 246
LEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVP
Sbjct: 270 LEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVP 329
Query: 247 EIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSI 306
EIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSI
Sbjct: 330 EIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSI 389
Query: 307 SADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGG 366
SADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGG
Sbjct: 390 SADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGG 449
Query: 367 FDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALKKHSA 426
FDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALKKHSA
Sbjct: 450 FDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALKKHSA 509
Query: 427 RQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEE 486
RQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEE
Sbjct: 510 RQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEE 569
Query: 487 EAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLEN 546
EAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLEN
Sbjct: 570 EAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLEN 629
Query: 547 IALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQK 606
IALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQK
Sbjct: 630 IALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQK 689
Query: 607 VPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKE 666
VPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKE
Sbjct: 690 VPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKE 749
Query: 667 EAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKK 726
EAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKK
Sbjct: 750 EAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKK 809
Query: 727 LFEAQEKLYKEYLQMAQNGSFQ 748
LFEAQEKLYKEYLQMAQNGSFQ
Sbjct: 810 LFEAQEKLYKEYLQMAQNGSFQ 831
>gi|62240994 cysteinyl-tRNA synthetase isoform d [Homo sapiens]
Length = 738
Score = 1436 bits (3716), Expect = 0.0
Identities = 710/710 (100%), Positives = 710/710 (100%)
Query: 39 KEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDI 98
KEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDI
Sbjct: 29 KEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDI 88
Query: 99 DDKIIKRARQNHLFEQYREKRPEAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQHA 158
DDKIIKRARQNHLFEQYREKRPEAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQHA
Sbjct: 89 DDKIIKRARQNHLFEQYREKRPEAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQHA 148
Query: 159 VQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKF 218
VQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKF
Sbjct: 149 VQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKF 208
Query: 219 WEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASS 278
WEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASS
Sbjct: 209 WEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASS 268
Query: 279 EKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWG 338
EKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWG
Sbjct: 269 EKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWG 328
Query: 339 KGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTG 398
KGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTG
Sbjct: 329 KGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTG 388
Query: 399 HLTIAGCKMSKSLKNFITIKDALKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKF 458
HLTIAGCKMSKSLKNFITIKDALKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKF
Sbjct: 389 HLTIAGCKMSKSLKNFITIKDALKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKF 448
Query: 459 LNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEM 518
LNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEM
Sbjct: 449 LNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEM 508
Query: 519 RALVSQCNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSL 578
RALVSQCNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSL
Sbjct: 509 RALVSQCNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSL 568
Query: 579 SLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTV 638
SLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTV
Sbjct: 569 SLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTV 628
Query: 639 VKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKY 698
VKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKY
Sbjct: 629 VKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKY 688
Query: 699 SKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQNGSFQ 748
SKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQNGSFQ
Sbjct: 689 SKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQNGSFQ 738
>gi|21269877 cysteinyl-tRNA synthetase isoform a [Homo sapiens]
Length = 726
Score = 1429 bits (3700), Expect = 0.0
Identities = 704/704 (100%), Positives = 704/704 (100%)
Query: 1 MADSSGQQGKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVY 60
MADSSGQQGKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVY
Sbjct: 1 MADSSGQQGKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVY 60
Query: 61 DASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRP 120
DASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRP
Sbjct: 61 DASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRP 120
Query: 121 EAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVN 180
EAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVN
Sbjct: 121 EAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVN 180
Query: 181 SCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTR 240
SCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTR
Sbjct: 181 SCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTR 240
Query: 241 VSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEG 300
VSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEG
Sbjct: 241 VSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEG 300
Query: 301 EGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASM 360
EGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASM
Sbjct: 301 EGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASM 360
Query: 361 DIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDA 420
DIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDA
Sbjct: 361 DIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDA 420
Query: 421 LKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQF 480
LKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQF
Sbjct: 421 LKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQF 480
Query: 481 EKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPN 540
EKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPN
Sbjct: 481 EKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPN 540
Query: 541 QALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRK 600
QALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRK
Sbjct: 541 QALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRK 600
Query: 601 IAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEE 660
IAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEE
Sbjct: 601 IAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEE 660
Query: 661 KRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDEN 704
KRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDEN
Sbjct: 661 KRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDEN 704
>gi|13375695 cysteinyl-tRNA synthetase 2, mitochondrial [Homo
sapiens]
Length = 564
Score = 241 bits (615), Expect = 2e-63
Identities = 165/454 (36%), Positives = 229/454 (50%), Gaps = 53/454 (11%)
Query: 213 SKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY-VSNGSVYFD 271
+ L +E DF +DM AL VLPP V RV+E +P+I++F++ I+ G Y + G+VYFD
Sbjct: 137 ASLASLYEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGNAYSTAKGNVYFD 196
Query: 272 TAKFASSEKHSYGKLV---PEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKP 328
S YGKLV P VG+ AD S+KR +DFALWKA+KP
Sbjct: 197 L----KSRGDKYGKLVGVVPGPVGEP-------------AD--SDKRHASDFALWKAAKP 237
Query: 329 GEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFEND 388
E W PWG GRPGWHIECSA+A + G+ +DIH GG DL FPHH+NE+AQ E + + +
Sbjct: 238 QEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCE 297
Query: 389 CWVRYFLHTGHLTIAGC--KMSKSLKNFITIKDALKKHSARQLRLAFLMHSWKDTLDYSS 446
W YFLH+GHL G KMSKSLKN+ITIKD LK S R L S++ +DYS
Sbjct: 298 QWGNYFLHSGHLHAKGKEEKMSKSLKNYITIKDFLKTFSPDVFRFFCLRSSYRSAIDYSD 357
Query: 447 NTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFYDKKTAIHKALC 506
+ M A Q L F + + ++ GQ EA L + K A+ AL
Sbjct: 358 SAMLQAQQLLLGLGSFLEDARAYMK------GQLACGSVREAMLWERLSSTKRAVKAALA 411
Query: 507 DNVDTRTVMEEMRALVSQCNLYMAARKAVRKRP-NQALLENIALYLTHMLKIFGAVEEDS 565
D+ DT V++ + L N + A + P + A+ I Y + G +
Sbjct: 412 DDFDTPRVVDAILGLAHHGNGQLRASLKEPEGPRSPAVFGAIISYFEQFFETVGISLANQ 471
Query: 566 SLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKI----------AREQKVPE---ILQ 612
V G G+ EAT+ + L FR+ VR+ AR Q++ E +L+
Sbjct: 472 QY---VSGDGS----EATLHGVVDELVRFRQKVRQFALAMPEATGDARRQQLLERQPLLE 524
Query: 613 LSDALRDNILPELGVRFEDHEGLPTVVKLVDRNT 646
D LR + G+ +D + +L+D+ T
Sbjct: 525 ACDTLRRGLTAH-GINIKDRSSTTSTWELLDQRT 557
Score = 98.2 bits (243), Expect = 2e-20
Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
Query: 2 ADSSGQQGKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYD 61
A + G+GR W P G + + +YNSLT KE I + +WY CGPTVYD
Sbjct: 30 AGRAASGGRGRA----WLQPTGRET-GVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYD 84
Query: 62 ASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHL 111
+H+GHA SY+ FDI+RR+L F + M ITD+DDKIIKRA + ++
Sbjct: 85 HAHLGHACSYVRFDIIRRILTKVFGCSIVMVMGITDVDDKIIKRANEMNI 134
>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 45.1 bits (105), Expect = 2e-04
Identities = 21/36 (58%), Positives = 29/36 (80%)
Query: 649 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMK 684
KE EEK++ +EE+RKK+EE A+R+QE+EAA K K
Sbjct: 89 KEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQMKEK 124
Score = 38.1 bits (87), Expect = 0.030
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 604 EQKVPEILQLSDALRDNILPELGVR--FEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEK 661
E+K P ++ D+L +N + R E +KL + + K E+K++ E+
Sbjct: 4 ERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDD 63
Query: 662 RKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQA 721
++KKE+ R+K+++E K + E E ++ K E + + K + +A
Sbjct: 64 KRKKEDKERKKKDEEKVKAEE------ESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEA 117
Query: 722 KKLKKLFEAQEKLYKE 737
K E +L++E
Sbjct: 118 AAQMKEKEESIQLHQE 133
>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 45.1 bits (105), Expect = 2e-04
Identities = 21/36 (58%), Positives = 29/36 (80%)
Query: 649 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMK 684
KE EEK++ +EE+RKK+EE A+R+QE+EAA K K
Sbjct: 89 KEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQMKEK 124
Score = 38.1 bits (87), Expect = 0.030
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 604 EQKVPEILQLSDALRDNILPELGVR--FEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEK 661
E+K P ++ D+L +N + R E +KL + + K E+K++ E+
Sbjct: 4 ERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDD 63
Query: 662 RKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQA 721
++KKE+ R+K+++E K + E E ++ K E + + K + +A
Sbjct: 64 KRKKEDKERKKKDEEKVKAEE------ESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEA 117
Query: 722 KKLKKLFEAQEKLYKE 737
K E +L++E
Sbjct: 118 AAQMKEKEESIQLHQE 133
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 42.7 bits (99), Expect = 0.001
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 622 LPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLA 681
LPE + +HE + K+ ++ ++++EEK R +EEK + +EE R ++E+ +
Sbjct: 770 LPEQKEKLWEHEKMQEQEKIWEQEEKMRDQEEKMRGQEEKMRGQEEKMRGQEEKMWGQEE 829
Query: 682 KMKIPPSEMFLSETDKYSKFDE-----NGLPTHDMEGKELSKGQAKKLK----KLFEAQE 732
KM +M+ E + + ++ G E +E +GQ +K++ K+ +E
Sbjct: 830 KMWGQEEKMWGQEEKMWGQEEKMEEKMQGQEEKMREQEEKMRGQEEKMREQEEKMRGQEE 889
Query: 733 KLY 735
K+Y
Sbjct: 890 KIY 892
Score = 38.1 bits (87), Expect = 0.030
Identities = 28/116 (24%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 630 EDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSE 689
+ E + ++ +R ++E EE R +EEK +K+EE EQE + + ++P +
Sbjct: 441 DQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEE---NMWEQEEKEWQQQRLPEQK 497
Query: 690 MFLSETDKYSKFDENGLPTHD-MEGKELSKGQAKKL---KKLFEAQEKLYKEYLQM 741
L E +K + +E + + +E GQ KK+ +K+ E +++++++ +M
Sbjct: 498 EKLWEQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKM 553
Score = 36.6 bits (83), Expect = 0.087
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 642 VDRNTLLKE---REEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMF-----LS 693
V NTL +E +EE+ R +E+K +K+EE R++E+ + KM+ +M+ L
Sbjct: 265 VQTNTLQEEMWRQEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMWRQEKRLR 324
Query: 694 ETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQM 741
E +K + E L E +E + ++ +K++E +EK+ ++ +M
Sbjct: 325 EQEKELREQEKEL-REQKELREQEEQMQEQEEKMWEQEEKMREQEEKM 371
Score = 36.6 bits (83), Expect = 0.087
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 630 EDHEGLPTVVKLVDRNTLLKEREEKRRVEEE-----KRKKKEEAARRKQEQEAAKLAKMK 684
E E L K+ ++ + E+EEK R +EE K+ ++E R +++Q + KM+
Sbjct: 495 EQKEKLWEQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKMR 554
Query: 685 IPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQ 743
+M+ E K E T D E K + + ++ +K +E++ +E + Q
Sbjct: 555 DQEQKMWDQEERMEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQ 613
Score = 36.2 bits (82), Expect = 0.11
Identities = 25/113 (22%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 629 FEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPS 688
++ E + ++ +R ++E EE R +EEK +++EE + ++E+ + KM+
Sbjct: 579 WDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMQEQEEKMWEQEEKMQEQEE 638
Query: 689 EMFLSETDKYSK----FDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
+M+ E + + +++ LP + E K Q + +K+ E +EK++++
Sbjct: 639 KMWEQEEKMWEQEEKMWEQQRLPEQKEKLWEHEKMQEQ--EKMQEQEEKIWEQ 689
Score = 36.2 bits (82), Expect = 0.11
Identities = 22/116 (18%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 622 LPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLA 681
LPE + +HE + K+ ++ + E+E+ + +E+ KK + + ++E+ +
Sbjct: 660 LPEQKEKLWEHEKMQEQEKMQEQEEKIWEQEKMEKKTQEQEKKTWDQEKMREEESMRERE 719
Query: 682 KMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
K EM + +K + +E + +E + ++ +K++E +EK++++
Sbjct: 720 KKMREEEEMMREQEEKMQEQEE--------KMQEQEEEMWEQEEKMWEQEEKMWEQ 767
Score = 35.8 bits (81), Expect = 0.15
Identities = 29/121 (23%), Positives = 62/121 (51%), Gaps = 6/121 (4%)
Query: 618 RDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARR----KQ 673
+D L E R + E + V+ + ++E+E+K R +EEK +++E R ++
Sbjct: 402 QDERLREKEERMREQEKMWEQVEKMREEKKMQEQEKKTRDQEEKMQEEERIREREKKMRE 461
Query: 674 EQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEK 733
E+E + + K+ E + E ++ ++ + LP + E K Q ++ +K++E +EK
Sbjct: 462 EEETMREQEEKMQKQEENMWEQEE-KEWQQQRLPEQKEKLWEQEKMQEQE-EKIWEQEEK 519
Query: 734 L 734
+
Sbjct: 520 I 520
Score = 33.9 bits (76), Expect = 0.57
Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 593 EFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKERE 652
+ RE R RE+K+ E + ++ E + ++ E K+ ++ + E+E
Sbjct: 584 KMREEERMREREKKMRE--------EEEMMREQEEKMQEQEE-----KMQEQEEKMWEQE 630
Query: 653 EKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDME 712
EK + +EEK ++EE + EQE + ++P + L E +K + ++ M+
Sbjct: 631 EKMQEQEEKMWEQEE---KMWEQEEKMWEQQRLPEQKEKLWEHEKMQEQEK-------MQ 680
Query: 713 GKELSKGQAKKLKKLFEAQEKLYKEYLQMAQNGSFQ 748
+E + +K++K + QEK + +M + S +
Sbjct: 681 EQEEKIWEQEKMEKKTQEQEKKTWDQEKMREEESMR 716
Score = 32.7 bits (73), Expect = 1.3
Identities = 23/107 (21%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKY- 698
+L ++ ++E+E+K R +EE+ +++E R K+E ++ E + +K
Sbjct: 377 RLWEQEKQMREQEQKMRDQEERMWEQDERLREKEE---------RMREQEKMWEQVEKMR 427
Query: 699 --SKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQ 743
K E T D E K + + ++ +K +E+ +E + Q
Sbjct: 428 EEKKMQEQEKKTRDQEEKMQEEERIREREKKMREEEETMREQEEKMQ 474
Score = 31.6 bits (70), Expect = 2.8
Identities = 24/122 (19%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Query: 628 RFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRK--------KKEEAARRKQEQEAAK 679
+ D E + K + R ++E+E++ +EEK + ++E ++ QEQE
Sbjct: 519 KIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKMRDQEQKMWDQEERMEKKTQEQEKKT 578
Query: 680 LAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYL 739
+ + E + E +K + +E + + + +E + ++ +K++E +EK+ ++
Sbjct: 579 WDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMQEQEEKMWEQEEKMQEQEE 638
Query: 740 QM 741
+M
Sbjct: 639 KM 640
Score = 31.2 bits (69), Expect = 3.7
Identities = 26/118 (22%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 630 EDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQE-----QEAAKLAKMK 684
E + L +L ++ ++E+EEK +EEK +++EE R++E ++ + + K
Sbjct: 332 EQEKELREQKELREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQK 391
Query: 685 IPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKL-----KKLFEAQEKLYKE 737
+ E + E D+ + E + + +++ K + +K KK + +EK+ +E
Sbjct: 392 MRDQEERMWEQDERLREKEERMREQEKMWEQVEKMREEKKMQEQEKKTRDQEEKMQEE 449
Score = 30.8 bits (68), Expect = 4.8
Identities = 25/117 (21%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 621 ILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKL 680
+LP++ E +L ++ ++++EEK +EE R +++E R+QE++ +
Sbjct: 261 LLPQVQTNTLQEEMWRQEEELREQEKKIRKQEEKMWRQEE-RLREQEGKMREQEEKMWRQ 319
Query: 681 AKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
K ++ E L E +K + ++ L + + +E + ++ +K+ E +EK++++
Sbjct: 320 EK-RLREQEKELREQEKELR-EQKELREQEEQMQEQEEKMWEQEEKMREQEEKMWRQ 374
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 42.4 bits (98), Expect = 0.002
Identities = 24/115 (20%), Positives = 61/115 (53%)
Query: 629 FEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPS 688
++ E + ++ +R ++E EE R +EEK +++EE R ++E+ + KM+
Sbjct: 550 WDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEE 609
Query: 689 EMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQ 743
+M+ E + + +E+ + + E + ++ +K++E +EK+ ++ +M +
Sbjct: 610 KMWEQEEKMWEQEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMRE 664
Score = 40.4 bits (93), Expect = 0.006
Identities = 31/132 (23%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
Query: 618 RDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQ---- 673
+D L E R + E + + + ++ERE+K R EEE +++EE ++++
Sbjct: 364 QDERLREKEERMREQEKMWEQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMW 423
Query: 674 EQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHD-MEGKELSKGQAKKL---KKLFE 729
EQE + + ++P + L E +K + +E + + +E GQ KK+ +K+ E
Sbjct: 424 EQEEKEWQQQRLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMRE 483
Query: 730 AQEKLYKEYLQM 741
+++++++ +M
Sbjct: 484 QEDQMWEQEEKM 495
Score = 37.0 bits (84), Expect = 0.067
Identities = 23/89 (25%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 649 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPT 708
K REEK+ E+EK+ +E R++E+ + KM+ EM + +K + +E
Sbjct: 535 KMREEKKTQEQEKKTWDQEEKMREEERMREREKKMR-EEEEMMREQEEKMQEQEEKMREQ 593
Query: 709 HDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
+ ++ K Q ++ +K++E +EK++++
Sbjct: 594 EEKMWEQEEKMQEQE-EKMWEQEEKMWEQ 621
Score = 37.0 bits (84), Expect = 0.067
Identities = 22/99 (22%), Positives = 51/99 (51%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYS 699
K+ ++ ++E+EEK R +EEK + +EE R ++E+ + KM+ +M E +
Sbjct: 647 KMWEQEEKMREQEEKMREQEEKMQGQEEKMREQEEKMQGQEEKMREQEEKMRGQEEKMWG 706
Query: 700 KFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEY 738
+ ++ M G+E + + ++++ E ++ E+
Sbjct: 707 QEEKMWGQEEKMWGQEEMREKEERIRDQKEKMQERLPEH 745
Score = 35.8 bits (81), Expect = 0.15
Identities = 34/142 (23%), Positives = 71/142 (50%), Gaps = 13/142 (9%)
Query: 603 REQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKE---REEKRRVEE 659
+ ++ E L+L+++ + I + E ++ V NTL +E +EE+ R +E
Sbjct: 188 KNAELQEKLRLAESEKSEIQLNVKELKRKLERAKFLLPQVQTNTLQEEMWRQEEELREQE 247
Query: 660 EKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKG 719
+K +K+EE R++E+ + KM+ E ++ + E L + E +E K
Sbjct: 248 KKIRKQEEKMWRQEERLREQEGKMR---------EQEEKMRRQEKRLREQEKELREQEK- 297
Query: 720 QAKKLKKLFEAQEKLYKEYLQM 741
+ ++ KKL E +E++ ++ +M
Sbjct: 298 ELREQKKLREQEEQMQEQEEKM 319
Score = 34.7 bits (78), Expect = 0.33
Identities = 22/95 (23%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 648 LKEREEKRRVEEEKRKKKEEAARR-----KQEQEAAKLAKMKIPPSEMFLSETDKYSKFD 702
L+E+E+K R +EEK ++EE R ++++E + + ++ E L E +K + +
Sbjct: 243 LREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELR-E 301
Query: 703 ENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
+ L + + +E + ++ +K+ E +EK++++
Sbjct: 302 QKKLREQEEQMQEQEEKMWEQEEKMREQEEKMWRQ 336
Score = 34.7 bits (78), Expect = 0.33
Identities = 25/100 (25%), Positives = 55/100 (55%), Gaps = 10/100 (10%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYS 699
K+ ++ ++ E+EEK + +EEK ++EE R ++E+ + KM+ E + E ++
Sbjct: 626 KMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQ--GQEEKMREQEEKM 683
Query: 700 KFDENGLPTHDMEGKELSKGQAKKL----KKLFEAQEKLY 735
+ E + E +E +GQ +K+ +K++ +EK++
Sbjct: 684 QGQEEKM----REQEEKMRGQEEKMWGQEEKMWGQEEKMW 719
Score = 34.7 bits (78), Expect = 0.33
Identities = 21/98 (21%), Positives = 51/98 (52%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYS 699
K+ ++ ++E+EEK + +EEK +++EE + ++E+ + KM+ +M+ E +
Sbjct: 654 KMREQEEKMREQEEKMQGQEEKMREQEEKMQGQEEKMREQEEKMRGQEEKMWGQEEKMWG 713
Query: 700 KFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
+ ++ E +E + Q +K+++ E+ E
Sbjct: 714 QEEKMWGQEEMREKEERIRDQKEKMQERLPEHEERCSE 751
Score = 34.3 bits (77), Expect = 0.43
Identities = 33/151 (21%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 593 EFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKERE 652
+ RE R RE+K+ E ++ + + + E E K+ ++ ++E+E
Sbjct: 555 KMREEERMREREKKMREEEEMMREQEEKMQEQEEKMREQEE------KMWEQEEKMQEQE 608
Query: 653 EKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDME 712
EK +EEK ++EE + ++++E + K+ E + E ++ + E + E
Sbjct: 609 EKMWEQEEKMWEQEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKM----RE 664
Query: 713 GKELSKGQAKKLKKLFEAQEKLYKEYLQMAQ 743
+E +GQ +K++ E +EK+ + +M +
Sbjct: 665 QEEKMQGQEEKMR---EQEEKMQGQEEKMRE 692
Score = 33.9 bits (76), Expect = 0.57
Identities = 24/105 (22%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAAR---RKQEQEAAKLAKMKIPPSEMFLSETD 696
++ +++ L+E+EE+ R E++K ++EE R + QEQE + + E + E +
Sbjct: 508 RMWEQDERLREKEERMR-EQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMREEERMRERE 566
Query: 697 KYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQM 741
K + +E + + + +E + ++ +K++E +EK+ ++ +M
Sbjct: 567 KKMREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKM 611
Score = 33.1 bits (74), Expect = 0.97
Identities = 25/108 (23%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 630 EDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSE 689
E + L KL ++ ++E+EEK +EEK +++EE R++E ++ E
Sbjct: 294 EQEKELREQKKLREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEE---------RLWEQE 344
Query: 690 MFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
+ E ++ + E + D +E + + ++ +K++E +EK+ +E
Sbjct: 345 KQMREQEQKMRDQEERMWEQDERLRE-KEERMREQEKMWEQEEKMQEE 391
Score = 33.1 bits (74), Expect = 0.97
Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSE-TDKY 698
++ +++ L+E+EE+ R E+EK ++EE + QE+E + + K+ E + E +K
Sbjct: 360 RMWEQDERLREKEERMR-EQEKMWEQEE---KMQEEERIREREKKMREEEETMREQEEKM 415
Query: 699 SKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
K +EN + E KE + + + K+ QEK+ ++
Sbjct: 416 QKQEEN---MWEQEEKEWQQQRLPEQKEKLWEQEKMQEQ 451
Score = 30.8 bits (68), Expect = 4.8
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETD--K 697
K+ ++ + E+EEK R +E+K +EE + E+ K +M+ +M+ E +
Sbjct: 480 KMREQEDQMWEQEEKMRDQEQKMWDQEERMWEQDERLREKEERMR-EQKKMWQQEEKMRE 538
Query: 698 YSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQ 743
K E T D E K + + ++ +K +E++ +E + Q
Sbjct: 539 EKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQ 584
>gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]
Length = 532
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 647 LLKEREEKRRV--EEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDEN 704
L K+REE+R+V EEE+R+K+EEA R+ +E+E + K +I +E K K E+
Sbjct: 307 LKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAE--KRQKMPED 364
Query: 705 GLPTHDMEGKELS-KGQAKKLKKLFEAQEK 733
GL K + KG + K+++ E K
Sbjct: 365 GLSDDKKPFKCFTPKGSSLKIEERAEFLNK 394
Score = 30.4 bits (67), Expect = 6.3
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 649 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPT 708
KE E +VE KR EE RR+ E E+ + K+K E L + K +E
Sbjct: 261 KEAEGAPQVEAGKRL--EELRRRRGETESEEFEKLKQKQQEAALELEELKKKREER---R 315
Query: 709 HDMEGKELSKGQAKKLKKLFEAQEK 733
+E +E + Q + +KL E +EK
Sbjct: 316 KVLEEEEQRRKQEEADRKLREEEEK 340
>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
Length = 558
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 647 LLKEREEKRRV--EEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDEN 704
L K+REE+R+V EEE+R+K+EEA R+ +E+E + K +I +E K K E+
Sbjct: 333 LKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAE--KRQKMPED 390
Query: 705 GLPTHDMEGKELS-KGQAKKLKKLFEAQEK 733
GL K + KG + K+++ E K
Sbjct: 391 GLSDDKKPFKCFTPKGSSLKIEERAEFLNK 420
Score = 30.4 bits (67), Expect = 6.3
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 649 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPT 708
KE E +VE KR EE RR+ E E+ + K+K E L + K +E
Sbjct: 287 KEAEGAPQVEAGKRL--EELRRRRGETESEEFEKLKQKQQEAALELEELKKKREER---R 341
Query: 709 HDMEGKELSKGQAKKLKKLFEAQEK 733
+E +E + Q + +KL E +EK
Sbjct: 342 KVLEEEEQRRKQEEADRKLREEEEK 366
>gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]
Length = 564
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 647 LLKEREEKRRV--EEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDEN 704
L K+REE+R+V EEE+R+K+EEA R+ +E+E + K +I +E K K E+
Sbjct: 339 LKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAE--KRQKMPED 396
Query: 705 GLPTHDMEGKELS-KGQAKKLKKLFEAQEK 733
GL K + KG + K+++ E K
Sbjct: 397 GLSDDKKPFKCFTPKGSSLKIEERAEFLNK 426
Score = 30.4 bits (67), Expect = 6.3
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 649 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPT 708
KE E +VE KR EE RR+ E E+ + K+K E L + K +E
Sbjct: 293 KEAEGAPQVEAGKRL--EELRRRRGETESEEFEKLKQKQQEAALELEELKKKREER---R 347
Query: 709 HDMEGKELSKGQAKKLKKLFEAQEK 733
+E +E + Q + +KL E +EK
Sbjct: 348 KVLEEEEQRRKQEEADRKLREEEEK 372
>gi|4826657 caldesmon 1 isoform 2 [Homo sapiens]
Length = 538
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 647 LLKEREEKRRV--EEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDEN 704
L K+REE+R+V EEE+R+K+EEA R+ +E+E + K +I +E K K E+
Sbjct: 313 LKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAE--KRQKMPED 370
Query: 705 GLPTHDMEGKELS-KGQAKKLKKLFEAQEK 733
GL K + KG + K+++ E K
Sbjct: 371 GLSDDKKPFKCFTPKGSSLKIEERAEFLNK 400
Score = 30.4 bits (67), Expect = 6.3
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 649 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPT 708
KE E +VE KR EE RR+ E E+ + K+K E L + K +E
Sbjct: 267 KEAEGAPQVEAGKRL--EELRRRRGETESEEFEKLKQKQQEAALELEELKKKREER---R 321
Query: 709 HDMEGKELSKGQAKKLKKLFEAQEK 733
+E +E + Q + +KL E +EK
Sbjct: 322 KVLEEEEQRRKQEEADRKLREEEEK 346
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 647 LLKEREEKRRV--EEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDEN 704
L K+REE+R+V EEE+R+K+EEA R+ +E+E + K +I +E K K E+
Sbjct: 568 LKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAE--KRQKMPED 625
Query: 705 GLPTHDMEGKELS-KGQAKKLKKLFEAQEK 733
GL K + KG + K+++ E K
Sbjct: 626 GLSDDKKPFKCFTPKGSSLKIEERAEFLNK 655
Score = 35.8 bits (81), Expect = 0.15
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 5/140 (3%)
Query: 603 REQKVPEILQLSDALRDNILPELGVRFEDHEG-LPTVVKLVDRNTLLKEREEKRRVEEEK 661
+E+ E +L R+ I E + D + K + +E EE+ R+ EE+
Sbjct: 262 KERAEAERARLEAEERERIKAEQDKKIADERARIEAEEKAAAQERERREAEERERMREEE 321
Query: 662 RKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDM----EGKELS 717
++ EE R K+E++ A + +I E +E + K +E E +E +
Sbjct: 322 KRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRARAEEEEKA 381
Query: 718 KGQAKKLKKLFEAQEKLYKE 737
K + +K K E ++ +E
Sbjct: 382 KVEEQKRNKQLEEKKHAMQE 401
Score = 33.1 bits (74), Expect = 0.97
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 595 REGVRKIARE-QKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLV--DRNTLLKER 651
RE ++ A E Q++ E + + R I E E+ + + K +R E
Sbjct: 318 REEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRARAEE 377
Query: 652 EEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDM 711
EEK +VEE+KR K+ E + ++ K K++ +++E K E+ L T +
Sbjct: 378 EEKAKVEEQKRNKQLEEKKHAMQETKIKGEKVEQKIEGKWVNE----KKAQEDKLQTAVL 433
Query: 712 EGKELSKG---QAKKLKKLFEAQEKLYKEYLQ 740
+ + KG QAK+ +KL E + KE ++
Sbjct: 434 KKQGEEKGTKVQAKR-EKLQEDKPTFKKEEIK 464
Score = 30.4 bits (67), Expect = 6.3
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 649 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPT 708
KE E +VE KR EE RR+ E E+ + K+K E L + K +E
Sbjct: 522 KEAEGAPQVEAGKRL--EELRRRRGETESEEFEKLKQKQQEAALELEELKKKREER---R 576
Query: 709 HDMEGKELSKGQAKKLKKLFEAQEK 733
+E +E + Q + +KL E +EK
Sbjct: 577 KVLEEEEQRRKQEEADRKLREEEEK 601
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 41.2 bits (95), Expect = 0.004
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 648 LKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLP 707
++EREEK + +EEK +++EE RR++E K KM+ EM + +K + +E
Sbjct: 297 IQEREEKIQEQEEKIREQEEKMRRQEEMMWEKEEKMR-RQEEMMWEKEEKIRELEEKMHE 355
Query: 708 THDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQ 740
+ +E + + +K+++ + QE+ K + Q
Sbjct: 356 QEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQ 388
Score = 38.5 bits (88), Expect = 0.023
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYS 699
K+ ++ ++E+EEK R +EE +KEE RR++E K + KI E + E +K
Sbjct: 303 KIQEQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEK--EEKIRELEEKMHEQEKIR 360
Query: 700 KFDENGLPTHDMEGKELSKGQAKKL----KKLFEAQEKLYKEYLQMAQ 743
+ +E + +E + Q K+ +K+ E +EK+ +E +M Q
Sbjct: 361 EQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKI-REQEEMMQ 407
Score = 37.4 bits (85), Expect = 0.051
Identities = 36/163 (22%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 591 LSEFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKE 650
+ E E +R+ +E+K+ ++ + + + + +E E + + + + ++E
Sbjct: 304 IQEQEEKIRE--QEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIRE 361
Query: 651 REEKRRVEE---EKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLP 707
+EEKR+ EE E+ K++E+ A+ +++E + + KI E + E ++ E +
Sbjct: 362 QEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMW 421
Query: 708 THD---MEGKELSKGQAKKL----KKLFEAQEKLYKEYLQMAQ 743
+ E +E + Q +K+ KK+ E +EK+ +E +M Q
Sbjct: 422 EQEEEMQEQEEKMRRQEEKIREQEKKIREQEEKI-REQEEMMQ 463
Score = 36.2 bits (82), Expect = 0.11
Identities = 32/153 (20%), Positives = 75/153 (49%), Gaps = 23/153 (15%)
Query: 593 EFREGVRKIA-REQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKER 651
+ RE +KI +E+K+ E ++ ++ E + + EG K+ ++ ++E+
Sbjct: 440 KIREQEKKIREQEEKIRE--------QEEMMQEQEEKMGEQEG-----KMCEQEAKMQEQ 486
Query: 652 EEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDM 711
EEK R +EEK +++E+ R ++E KI E + E ++ E + +
Sbjct: 487 EEKMRRQEEKIREQEKKIREQEE---------KIREQEEMMQEQEEKMWEQEEKMCEQEE 537
Query: 712 EGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQN 744
+ +E + ++ +K+ E + +L ++ +M ++
Sbjct: 538 KMQEQEEKMRRQEEKMREQEVRLRQQEEKMQEH 570
Score = 33.5 bits (75), Expect = 0.74
Identities = 21/98 (21%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYS 699
K+ ++ ++E+EEK R +EEK +++E+ R ++E KI E + E ++
Sbjct: 419 KMWEQEEEMQEQEEKMRRQEEKIREQEKKIREQEE---------KIREQEEMMQEQEEKM 469
Query: 700 KFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
E + + + +E + ++ +K+ E ++K+ ++
Sbjct: 470 GEQEGKMCEQEAKMQEQEEKMRRQEEKIREQEKKIREQ 507
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 41.2 bits (95), Expect = 0.004
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 616 ALRDNILPELGVR-FEDHEGLPTVVKLVDRNTLLKERE-EKRRVEEEKRKKKEEAARRKQ 673
A+ ++LP L + FE+ E + K D+ K++E EK + E+E+ K+K E +R++
Sbjct: 676 AMLPSLLPVLPEKLFEEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEKREREKREK 735
Query: 674 EQEAAKLAKMKIPP 687
E+E K K+K+ P
Sbjct: 736 EKEKHKHEKIKVEP 749
Score = 30.8 bits (68), Expect = 4.8
Identities = 36/166 (21%), Positives = 72/166 (43%), Gaps = 28/166 (16%)
Query: 595 REGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKERE-- 652
+E ++ RE K P + L++ + ++ E + VKL D + KE+E
Sbjct: 562 KEKDKETGRETKYP----WKEFLKEEEADPYKFKIKEFEDVDPKVKLKD-GLVRKEKEKH 616
Query: 653 -------EKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFL-----SETDKYSK 700
EK + +++KR+K++ + ++++ A + +PP E+ L + +
Sbjct: 617 KDKKKDREKGKKDKDKREKEKVKDKGREDKMKAPAPPLVLPPKELALPLFSPATASRVPA 676
Query: 701 FDENGLPT---------HDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
+ LP ++ KE K + +K KK + +EK KE
Sbjct: 677 MLPSLLPVLPEKLFEEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKE 722
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 41.2 bits (95), Expect = 0.004
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 20/143 (13%)
Query: 604 EQKVPEILQLSDALRDNILPELGVRFED-------HEGLPTVVKLVDRNTLLKEREEKRR 656
++KV E+ QL ++D L + E+ HE L + +++KER+ RR
Sbjct: 1843 QKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLE------EMKSVMKERDNLRR 1896
Query: 657 VEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYS------KFDENGLPTHD 710
VEE + ++++ QE +A L + + LS+ K + K E + D
Sbjct: 1897 VEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISD 1956
Query: 711 MEGKELSKGQAKKLKKLFEAQEK 733
++ K+L K + + KK+ E Q+K
Sbjct: 1957 IQ-KDLDKSKDELQKKIQELQKK 1978
>gi|22035606 mitogen-activated protein kinase kinase kinase kinase 4
isoform 3 [Homo sapiens]
Length = 1212
Score = 41.2 bits (95), Expect = 0.004
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 15/139 (10%)
Query: 559 GAVEEDSSLGFPVGGPGTSLSL--EATVM-PYLQVLSEFREGVRKIAREQKVPEI-LQLS 614
G+ EE+ + G P + +++ E+T+ +L++ E +E + R+Q + E L+
Sbjct: 325 GSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQ 384
Query: 615 DALRDNILPELGVRFEDHEGLPTVV-----------KLVDRNTLLKEREEKRRVEEEKRK 663
+ + +L E R E + + + +R +E+EEKRR+EE +R+
Sbjct: 385 EEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERR 444
Query: 664 KKEEAARRKQEQEAAKLAK 682
+KEE RR+ E+E ++ +
Sbjct: 445 RKEEEERRRAEEEKRRVER 463
Score = 33.5 bits (75), Expect = 0.74
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 649 KEREEKRRVEEEKRK--KKEEAARRKQEQEAAKL 680
KE EE+RR EEEKR+ +++E RR+ E+E L
Sbjct: 446 KEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHL 479
Score = 32.0 bits (71), Expect = 2.2
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 648 LKEREEKRRVEEEKRKKKEEAARRKQEQE 676
L+E E +R+ EEE+R+ +EE R ++EQE
Sbjct: 438 LEELERRRKEEEERRRAEEEKRRVEREQE 466
>gi|22035602 mitogen-activated protein kinase kinase kinase kinase 4
isoform 1 [Homo sapiens]
Length = 1166
Score = 41.2 bits (95), Expect = 0.004
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 15/139 (10%)
Query: 559 GAVEEDSSLGFPVGGPGTSLSL--EATVM-PYLQVLSEFREGVRKIAREQKVPEI-LQLS 614
G+ EE+ + G P + +++ E+T+ +L++ E +E + R+Q + E L+
Sbjct: 325 GSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQ 384
Query: 615 DALRDNILPELGVRFEDHEGLPTVV-----------KLVDRNTLLKEREEKRRVEEEKRK 663
+ + +L E R E + + + +R +E+EEKRR+EE +R+
Sbjct: 385 EEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERR 444
Query: 664 KKEEAARRKQEQEAAKLAK 682
+KEE RR+ E+E ++ +
Sbjct: 445 RKEEEERRRAEEEKRRVER 463
Score = 33.5 bits (75), Expect = 0.74
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 649 KEREEKRRVEEEKRK--KKEEAARRKQEQEAAKL 680
KE EE+RR EEEKR+ +++E RR+ E+E L
Sbjct: 446 KEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHL 479
Score = 32.0 bits (71), Expect = 2.2
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 648 LKEREEKRRVEEEKRKKKEEAARRKQEQE 676
L+E E +R+ EEE+R+ +EE R ++EQE
Sbjct: 438 LEELERRRKEEEERRRAEEEKRRVEREQE 466
>gi|22035604 mitogen-activated protein kinase kinase kinase kinase 4
isoform 2 [Homo sapiens]
Length = 1320
Score = 41.2 bits (95), Expect = 0.004
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 15/139 (10%)
Query: 559 GAVEEDSSLGFPVGGPGTSLSL--EATVM-PYLQVLSEFREGVRKIAREQKVPEI-LQLS 614
G+ EE+ + G P + +++ E+T+ +L++ E +E + R+Q + E L+
Sbjct: 325 GSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQ 384
Query: 615 DALRDNILPELGVRFEDHEGLPTVV-----------KLVDRNTLLKEREEKRRVEEEKRK 663
+ + +L E R E + + + +R +E+EEKRR+EE +R+
Sbjct: 385 EEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERR 444
Query: 664 KKEEAARRKQEQEAAKLAK 682
+KEE RR+ E+E ++ +
Sbjct: 445 RKEEEERRRAEEEKRRVER 463
Score = 33.5 bits (75), Expect = 0.74
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 649 KEREEKRRVEEEKRK--KKEEAARRKQEQEAAKL 680
KE EE+RR EEEKR+ +++E RR+ E+E L
Sbjct: 446 KEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHL 479
Score = 32.0 bits (71), Expect = 2.2
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 648 LKEREEKRRVEEEKRKKKEEAARRKQEQE 676
L+E E +R+ EEE+R+ +EE R ++EQE
Sbjct: 438 LEELERRRKEEEERRRAEEEKRRVEREQE 466
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 40.8 bits (94), Expect = 0.005
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 649 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPT 708
KE+ +++R E+EK+KK +E +RK+++E K K K + E ++ + +E
Sbjct: 30 KEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKK----EEEEREEEEEEEEEE 85
Query: 709 HDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
+ E KE + + KK K+ + +E+ K+
Sbjct: 86 KEEEEKEEGRRRKKKKKRRRKEEEEEKKK 114
Score = 32.3 bits (72), Expect = 1.6
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 649 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMK 684
+E+EE+ + E +RKKK++ R+++E+E K + K
Sbjct: 84 EEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRK 119
Score = 30.8 bits (68), Expect = 4.8
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 649 KEREEKRRVEEEK---RKKKEEAARRKQEQEAAKLAKMK 684
+E EE+ + EEEK R++K++ RR++E+E K K +
Sbjct: 79 EEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRR 117
>gi|12711676 UPF3 regulator of nonsense transcripts homolog A
isoform hUpf3p [Homo sapiens]
Length = 476
Score = 39.7 bits (91), Expect = 0.010
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKL----AKMKIPPSEMFLSET 695
KL + ++REE+RR E EK++ +EE RR++E+E K + KI E+ +
Sbjct: 225 KLEKQRIREEKREERRRRELEKKRLREEEKRRRREEERCKKKETDKQKKIAEKEVRIKLL 284
Query: 696 DKYSKFDENGLPTHDMEGKELSKGQAKK 723
K K +E G+E+ G K+
Sbjct: 285 KKPEKGEEPTTEKPKERGEEIDTGGGKQ 312
>gi|18375525 UPF3 regulator of nonsense transcripts homolog A
isoform hUpf3pdelta [Homo sapiens]
Length = 443
Score = 39.7 bits (91), Expect = 0.010
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKL----AKMKIPPSEMFLSET 695
KL + ++REE+RR E EK++ +EE RR++E+E K + KI E+ +
Sbjct: 192 KLEKQRIREEKREERRRRELEKKRLREEEKRRRREEERCKKKETDKQKKIAEKEVRIKLL 251
Query: 696 DKYSKFDENGLPTHDMEGKELSKGQAKK 723
K K +E G+E+ G K+
Sbjct: 252 KKPEKGEEPTTEKPKERGEEIDTGGGKQ 279
>gi|15826852 acyl-Coenzyme A binding domain containing 3 [Homo
sapiens]
Length = 528
Score = 39.3 bits (90), Expect = 0.013
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 648 LKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETD-KYSKFDENGL 706
L++ EEKRR EEE+R ++EE RR+ E+E +L + K S+T ++ ++
Sbjct: 207 LQKEEEKRRREEEERLRREEEERRRIEEERLRLEQQKQQIMAALNSQTAVQFQQYAAQQY 266
Query: 707 PTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQ 740
P + + + L + + QE+ Y++Y+Q
Sbjct: 267 PGNYEQQQILIR----------QLQEQHYQQYMQ 290
Score = 35.0 bits (79), Expect = 0.25
Identities = 17/30 (56%), Positives = 24/30 (80%), Gaps = 2/30 (6%)
Query: 649 KEREEKRRVEEEKRKK--KEEAARRKQEQE 676
KE EE+RR EEE+R++ KEE RR++E+E
Sbjct: 191 KEEEERRRREEEERERLQKEEEKRRREEEE 220
Score = 34.7 bits (78), Expect = 0.33
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 649 KEREEKRRVEEEKRKKKEEAARRKQEQEAAK 679
KE +EK+R EEE+R+++EE R + ++E K
Sbjct: 183 KEEQEKKRKEEEERRRREEEERERLQKEEEK 213
Score = 32.7 bits (73), Expect = 1.3
Identities = 14/39 (35%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 649 KEREEKRRV--EEEKRKKKEEAARRKQEQEAAKLAKMKI 685
+E EE+ R+ EEEKR+++EE R++E+E ++ + ++
Sbjct: 199 REEEERERLQKEEEKRRREEEERLRREEEERRRIEEERL 237
Score = 31.2 bits (69), Expect = 3.7
Identities = 12/25 (48%), Positives = 20/25 (80%)
Query: 658 EEEKRKKKEEAARRKQEQEAAKLAK 682
E+EK++K+EE RR++E+E +L K
Sbjct: 185 EQEKKRKEEEERRRREEEERERLQK 209
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 39.3 bits (90), Expect = 0.013
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQ--------EAAKLAKMKIPPSEMF 691
K + L ++RE++RR +E + +++ E RR+QE+ E + + + +E
Sbjct: 677 KAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERE 736
Query: 692 LSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
L E +K + + L E K+ + Q ++L E QEK KE
Sbjct: 737 LQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKE 782
Score = 38.1 bits (87), Expect = 0.030
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 600 KIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEE 659
K+ RE+++ ++LQ + + ++ E + + +D T E+ ++ R+ E
Sbjct: 571 KLKREERLRKVLQARERVEQ-------MKEEKKKQIEQKFAQIDEKT---EKAKEERLAE 620
Query: 660 EKRKKKEEA-------ARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDME 712
EK KKK A ARRKQE+EA +L ++ E E + K +E E
Sbjct: 621 EKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAE 680
Query: 713 GKELSKGQAKKLKKLFEAQEKLYKE 737
K L++ Q ++ ++ E +E+ +E
Sbjct: 681 AKRLAE-QREQERREQERREQERRE 704
Score = 31.2 bits (69), Expect = 3.7
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
Query: 639 VKLVDRNTLLKEREEKRRVEEEKRKKK-----------EEAARRKQEQEAAKLAKMKIPP 687
VKL L K + + RVE+ K +KK E+ + K+E+ A + AK K
Sbjct: 570 VKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAA 629
Query: 688 SEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKL-KKLFEAQEKLYK 736
+M E + K +E ++ +E + + L KK E QE+L K
Sbjct: 630 KKM--EEVEARRKQEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRK 677
Score = 31.2 bits (69), Expect = 3.7
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 648 LKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLP 707
L++ E +R+ E++ +++ E RR+QE+ + + + E L+E ++ + +
Sbjct: 675 LRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAE 734
Query: 708 THDMEGKELSKGQAKKL------KKLFEAQEKLYKEYLQMAQ 743
E ++ + Q ++L KK E Q++L + LQ Q
Sbjct: 735 RELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQ 776
Score = 30.8 bits (68), Expect = 4.8
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 650 EREEKRRVEEEKRKKKEEAARRKQE------QEAAKLAKMKIPPSEMFLSETDKYSKFDE 703
E+ +++VEE+KR++ EE +++E Q ++ +MK + + + + E
Sbjct: 552 EQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTE 611
Query: 704 NGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
E K K AKK++++ EA+ K +E
Sbjct: 612 KAKEERLAEEKAKKKAAAKKMEEV-EARRKQEEE 644
Score = 30.4 bits (67), Expect = 6.3
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 628 RFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEE---AARRKQEQEAAKLAK 682
R + E L +L +R L+ ++E+ + E E++KKKEE A R+ ++E K AK
Sbjct: 724 RRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAK 781
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 39.3 bits (90), Expect = 0.013
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQ--------EAAKLAKMKIPPSEMF 691
K + L ++RE++RR +E + +++ E RR+QE+ E + + + +E
Sbjct: 673 KAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERE 732
Query: 692 LSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
L E +K + + L E K+ + Q ++L E QEK KE
Sbjct: 733 LQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKE 778
Score = 38.1 bits (87), Expect = 0.030
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 600 KIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEE 659
K+ RE+++ ++LQ + + ++ E + + +D T E+ ++ R+ E
Sbjct: 567 KLKREERLRKVLQARERVEQ-------MKEEKKKQIEQKFAQIDEKT---EKAKEERLAE 616
Query: 660 EKRKKKEEA-------ARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDME 712
EK KKK A ARRKQE+EA +L ++ E E + K +E E
Sbjct: 617 EKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAE 676
Query: 713 GKELSKGQAKKLKKLFEAQEKLYKE 737
K L++ Q ++ ++ E +E+ +E
Sbjct: 677 AKRLAE-QREQERREQERREQERRE 700
Score = 31.2 bits (69), Expect = 3.7
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
Query: 639 VKLVDRNTLLKEREEKRRVEEEKRKKK-----------EEAARRKQEQEAAKLAKMKIPP 687
VKL L K + + RVE+ K +KK E+ + K+E+ A + AK K
Sbjct: 566 VKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAA 625
Query: 688 SEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKL-KKLFEAQEKLYK 736
+M E + K +E ++ +E + + L KK E QE+L K
Sbjct: 626 KKM--EEVEARRKQEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRK 673
Score = 31.2 bits (69), Expect = 3.7
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 648 LKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLP 707
L++ E +R+ E++ +++ E RR+QE+ + + + E L+E ++ + +
Sbjct: 671 LRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAE 730
Query: 708 THDMEGKELSKGQAKKL------KKLFEAQEKLYKEYLQMAQ 743
E ++ + Q ++L KK E Q++L + LQ Q
Sbjct: 731 RELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQ 772
Score = 30.8 bits (68), Expect = 4.8
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 650 EREEKRRVEEEKRKKKEEAARRKQE------QEAAKLAKMKIPPSEMFLSETDKYSKFDE 703
E+ +++VEE+KR++ EE +++E Q ++ +MK + + + + E
Sbjct: 548 EQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTE 607
Query: 704 NGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
E K K AKK++++ EA+ K +E
Sbjct: 608 KAKEERLAEEKAKKKAAAKKMEEV-EARRKQEEE 640
Score = 30.4 bits (67), Expect = 6.3
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 628 RFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEE---AARRKQEQEAAKLAK 682
R + E L +L +R L+ ++E+ + E E++KKKEE A R+ ++E K AK
Sbjct: 720 RRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAK 777
>gi|108773810 leucyl-tRNA synthetase [Homo sapiens]
Length = 1176
Score = 38.9 bits (89), Expect = 0.018
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 360 MDIHGGGFDLRFPHHDNELAQSEAYF--ENDCWVRYFLHTGHLTIAGCKMSKSLKNFITI 417
+D+ G DL H L A + ++D W GHL + KMSKS NF+T+
Sbjct: 668 VDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVRANGHLLLNSEKMSKSTGNFLTL 727
Query: 418 KDALKKHSARQLRLA 432
A+ K SA +RLA
Sbjct: 728 TQAIDKFSADGMRLA 742
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 38.9 bits (89), Expect = 0.018
Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 647 LLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGL 706
L EREEK +++EE ++ KEEA ++K+E++ K + + + + +K +E
Sbjct: 350 LRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRK 409
Query: 707 PTHD-MEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQ 743
+ +E K K + ++ K+L E ++++ E ++ +
Sbjct: 410 ERQEALEAKLEEKRKKEEEKRLREEEKRIKAEKAEITR 447
Score = 34.7 bits (78), Expect = 0.33
Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 15/175 (8%)
Query: 560 AVEEDSSLGFPVGGPG-----TSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLS 614
++ SS P G P +S S T P ++ +F +G + + + + +L
Sbjct: 286 SLSSPSSTSSPEGPPAPPKQHSSTSPFPTSTPLRRITKKFVKGSTEKNKLRLQRDQERLG 345
Query: 615 DALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQE 674
L+ L E+ E L K K+ EEK E+E+R+K+E+ + K E
Sbjct: 346 KQLK------LRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAE 399
Query: 675 QEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFE 729
++ K + K + +K K +E L E ++ K + ++ + F+
Sbjct: 400 KQRLKEERRKERQEALEAKLEEKRKKEEEKRL----REEEKRIKAEKAEITRFFQ 450
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 38.5 bits (88), Expect = 0.023
Identities = 25/98 (25%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYS 699
K+ + ++E+EEK R +EEK +++EE RR++E K KM+ E + E ++
Sbjct: 308 KIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMR--RQEEMMWEKEEKM 365
Query: 700 KFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
+ E + + + + + +K +K+ E +EK++++
Sbjct: 366 RRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEEKMHEQ 403
Score = 37.0 bits (84), Expect = 0.067
Identities = 23/109 (21%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKM-----KIPPSEMFLSE 694
K+ ++ ++E+EEK R +EEK +++EE + ++E+ + KM K+ E +
Sbjct: 613 KIREQEEKIQEQEEKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEETMWR 672
Query: 695 TDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQ 743
++ + E + + + +E + ++ +K++E +EK+ ++ +M +
Sbjct: 673 QEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQE 721
Score = 35.8 bits (81), Expect = 0.15
Identities = 23/95 (24%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 648 LKEREEKRRVEEEKRKKKEEAARRKQE-----QEAAKLAKMKIPPSEMFLSETDKYSKFD 702
++E+EEKR+ +EEK K+EE R ++E +E + + KI E E ++
Sbjct: 593 IREQEEKRQEQEEKMWKQEEKIREQEEKIQEQEEKIREQEEKIREQEEMTQEQEEKMGEQ 652
Query: 703 ENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
E + + + +E + ++ +K+ E ++K+ ++
Sbjct: 653 EEKMCEQEEKMQEQEETMWRQEEKIREQEKKIREQ 687
Score = 33.5 bits (75), Expect = 0.74
Identities = 23/109 (21%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKM-----KIPPSEMFLSE 694
K+ + ++E+EEK + +EEK +++EE R ++E + KM K+ E + E
Sbjct: 606 KMWKQEEKIREQEEKIQEQEEKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQE 665
Query: 695 TDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQ 743
++ E + + + +E + ++ + + E +EK++++ +M +
Sbjct: 666 QEETMWRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQEEKMCE 714
Score = 33.1 bits (74), Expect = 0.97
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 648 LKEREEKRRVEEEKRKKKEEAARRKQE---QEAAKLAKMKIPPSEMFLSETDKYSKFDEN 704
++E+EEK R +EEK ++EE R ++E +E + KI E + DK + +E
Sbjct: 519 IREQEEKIREQEEKMWRQEEKIREQEEMWREEEKMHEQEKIWEEEKRQEQEDKMWRQEEK 578
Query: 705 GLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
+ ++ K + ++ K+ E +EK++K+
Sbjct: 579 IREQEEKVWRQEEKIREQEEKRQ-EQEEKMWKQ 610
Score = 33.1 bits (74), Expect = 0.97
Identities = 22/98 (22%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 640 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYS 699
K+ ++ + +EEK R +EEKR+++EE +++E KI E + E ++
Sbjct: 578 KIREQEEKVWRQEEKIREQEEKRQEQEEKMWKQEE---------KIREQEEKIQEQEEKI 628
Query: 700 KFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
+ E + + +E + ++ +K+ E +EK+ ++
Sbjct: 629 REQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQ 666
Score = 32.0 bits (71), Expect = 2.2
Identities = 23/96 (23%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 647 LLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKM-----KIPPSEMFLSETDKYSKF 701
L ++ E+ ++ E++ K++EE R+QE+ + AKM KI E + E +K
Sbjct: 396 LEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEKKMWR 455
Query: 702 DENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
E + H+ E K + + ++ ++++ +EK++++
Sbjct: 456 QEEKI--HEQE-KIREEEKRQEQEEMWRQEEKIHEQ 488
Score = 30.8 bits (68), Expect = 4.8
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 648 LKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKM-----KIPPSEMFLSETDKYSKFD 702
+ E+EEK R +EEK ++EE R ++E+ + KM KI E E +K + +
Sbjct: 498 MHEQEEKIRKQEEKVWRQEEKIREQEEKIREQEEKMWRQEEKIREQEEMWREEEKMHEQE 557
Query: 703 ENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
+ E ++ Q +K++ E +EK++++
Sbjct: 558 KIWEEEKRQEQEDKMWRQEEKIR---EQEEKVWRQ 589
Score = 30.0 bits (66), Expect = 8.2
Identities = 22/100 (22%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 640 KLVDRNTLLKEREEKRRVEEEK--RKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDK 697
K+ ++ ++E+E+K +EEK ++K ++QEQE + KI E + +K
Sbjct: 438 KIREQEEKIREQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIHEQEEIWRQKEK 497
Query: 698 YSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
+ +E + ++ K + ++ +K+ E +EK++++
Sbjct: 498 MHEQEEKIRKQEEKVWRQEEKIREQE-EKIREQEEKMWRQ 536
>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
sapiens]
Length = 693
Score = 38.1 bits (87), Expect = 0.030
Identities = 21/90 (23%), Positives = 49/90 (54%)
Query: 648 LKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLP 707
L +E+K+R++E++ +E+ A+R +EQE ++ + L E + + E L
Sbjct: 330 LLSKEQKQRLQEQEEMLREQEAQRVREQERLCEQNERLREQQKTLQEQGERLRKQEQRLR 389
Query: 708 THDMEGKELSKGQAKKLKKLFEAQEKLYKE 737
+ ++ + K+ K+L++ +E+L+K+
Sbjct: 390 KQEERLRKEEERLQKQEKRLWDQEERLWKK 419
Score = 37.4 bits (85), Expect = 0.051
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 648 LKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSK-FDENGL 706
L+++EE+ R EEE+ +K+E+ ++E+ K +++ + LS+ K K E
Sbjct: 388 LRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQKQEERLALSQNHKLDKQLAEPQC 447
Query: 707 PTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQNGSFQ 748
D+ ++ S Q ++ K E QEKL +E+L+ A + Q
Sbjct: 448 SFEDLNNEKKSALQLEQQVK--ELQEKLDEEHLEAASQRNQQ 487
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,334,137
Number of Sequences: 37866
Number of extensions: 1311788
Number of successful extensions: 14264
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 223
Number of HSP's that attempted gapping in prelim test: 9373
Number of HSP's gapped (non-prelim): 2804
length of query: 748
length of database: 18,247,518
effective HSP length: 110
effective length of query: 638
effective length of database: 14,082,258
effective search space: 8984480604
effective search space used: 8984480604
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.