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Search of human proteins with 239748777
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
(350 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 725 0.0
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 223 2e-58
gi|239754245 PREDICTED: hypothetical protein [Homo sapiens] 185 5e-47
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 62 6e-10
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 62 8e-10
gi|110832843 TBP-associated factor 4 [Homo sapiens] 60 2e-09
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 60 4e-09
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 60 4e-09
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 59 6e-09
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 59 6e-09
gi|112421108 capicua homolog [Homo sapiens] 59 8e-09
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 57 2e-08
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 57 2e-08
gi|91208420 bassoon protein [Homo sapiens] 57 2e-08
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 57 2e-08
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 57 2e-08
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens] 57 2e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 57 3e-08
gi|238908524 hypothetical protein LOC389333 [Homo sapiens] 56 5e-08
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 7e-08
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 55 1e-07
gi|47132519 Ras association and pleckstrin homology domains 1 is... 54 2e-07
gi|95147559 ankyrin repeat domain 43 [Homo sapiens] 54 2e-07
gi|239754458 PREDICTED: hypothetical protein [Homo sapiens] 54 2e-07
gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo ... 54 2e-07
gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo ... 54 2e-07
gi|14149696 SEC31 homolog B [Homo sapiens] 54 2e-07
gi|18959210 WIRE protein [Homo sapiens] 54 2e-07
gi|19924099 synapsin I isoform Ia [Homo sapiens] 53 4e-07
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 53 4e-07
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 725 bits (1872), Expect = 0.0
Identities = 350/350 (100%), Positives = 350/350 (100%)
Query: 1 MCREKATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPP 60
MCREKATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPP
Sbjct: 1 MCREKATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPP 60
Query: 61 SSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRW 120
SSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRW
Sbjct: 61 SSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRW 120
Query: 121 RRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPG 180
RRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPG
Sbjct: 121 RRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPG 180
Query: 181 EAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPP 240
EAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPP
Sbjct: 181 EAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPP 240
Query: 241 CATRREEDMALRTRDRTSSRGTVFRAADWGFGRSEQHLRGLTLIISCTLSHKPASLRRSG 300
CATRREEDMALRTRDRTSSRGTVFRAADWGFGRSEQHLRGLTLIISCTLSHKPASLRRSG
Sbjct: 241 CATRREEDMALRTRDRTSSRGTVFRAADWGFGRSEQHLRGLTLIISCTLSHKPASLRRSG 300
Query: 301 TQAWGPRGLPLRATPESFKGSPDCTGPEIGFDMELLRSSLERRPAHSSRS 350
TQAWGPRGLPLRATPESFKGSPDCTGPEIGFDMELLRSSLERRPAHSSRS
Sbjct: 301 TQAWGPRGLPLRATPESFKGSPDCTGPEIGFDMELLRSSLERRPAHSSRS 350
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 223 bits (568), Expect = 2e-58
Identities = 133/235 (56%), Positives = 139/235 (59%), Gaps = 17/235 (7%)
Query: 133 RSRHPHT-RYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGE---AGPPRGD 188
+ RH H+ R P ATP R P + PG SP PA P A P R
Sbjct: 17 QGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPA 76
Query: 189 PRPRAPRPGDHPRRSPALRETPSLSPPSP-----GRRNGKRAAGKGTTPQPQP--PPPPC 241
R P PG R + PS+ PP G G+ GKG P P PP P
Sbjct: 77 LRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPP 136
Query: 242 ATRREEDMALRTRDRTSSRGT------VFRAADWGFGRSEQHLRGLTLIISCTLSHKPAS 295
RR AL T G VFRAADWGFGRSEQHLRGLTLIISCTLSHKPAS
Sbjct: 137 GGRRTWLSALATGPAAGGAGRRRRSPPVFRAADWGFGRSEQHLRGLTLIISCTLSHKPAS 196
Query: 296 LRRSGTQAWGPRGLPLRATPESFKGSPDCTGPEIGFDMELLRSSLERRPAHSSRS 350
LRRSGTQAWGPRGLPLRATPESFKGSPDCTGPEIGFDMELLRSSLERRPAHSSRS
Sbjct: 197 LRRSGTQAWGPRGLPLRATPESFKGSPDCTGPEIGFDMELLRSSLERRPAHSSRS 251
>gi|239754245 PREDICTED: hypothetical protein [Homo sapiens]
Length = 160
Score = 185 bits (470), Expect = 5e-47
Identities = 89/98 (90%), Positives = 92/98 (93%)
Query: 253 TRDRTSSRGTVFRAADWGFGRSEQHLRGLTLIISCTLSHKPASLRRSGTQAWGPRGLPLR 312
T+++ VFRAADWGFGRSEQHLRGLTLIISCTLSHKPASLRRSGTQAWGPRGLPLR
Sbjct: 63 TQNKLPRVAAVFRAADWGFGRSEQHLRGLTLIISCTLSHKPASLRRSGTQAWGPRGLPLR 122
Query: 313 ATPESFKGSPDCTGPEIGFDMELLRSSLERRPAHSSRS 350
ATPESFKGSPDCTGPEIGFDMELLRSSLERRPAHSSRS
Sbjct: 123 ATPESFKGSPDCTGPEIGFDMELLRSSLERRPAHSSRS 160
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 62.4 bits (150), Expect = 6e-10
Identities = 67/231 (29%), Positives = 91/231 (39%), Gaps = 21/231 (9%)
Query: 30 GSRAHPNPRSASSA--AAAASSSFPPPGF-------IHPPSSRAAVHSRLRAAPAAAPRL 80
G A P P +A++A AAAASSS P + I SR A R R+
Sbjct: 3 GPPALPPPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERIC-----RM 57
Query: 81 LPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRP---GPSPPLQPRS-RH 136
+ R P RT A ++ A + + R +P G +PP PR+ R
Sbjct: 58 VRRRHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPRG 117
Query: 137 PHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRP 196
A P TP PPP P A + P A + P GP + P PRA R
Sbjct: 118 APAAAAAAAPPPTPAPPPPPA-PVAAAAPARAPRAAAAAATAPPSPGPAQ--PGPRAQRA 174
Query: 197 GDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCATRREE 247
PA P+++PP+ RR A P P PP PP ++++
Sbjct: 175 APLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQ 225
Score = 60.1 bits (144), Expect = 3e-09
Identities = 58/173 (33%), Positives = 64/173 (36%), Gaps = 41/173 (23%)
Query: 76 AAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSR 135
A P PR GAPA AAAAA A PT P P PP P +
Sbjct: 106 ATPPAPPRAPRGAPA-----------AAAAA-----APPPT-------PAPPPPPAPVAA 142
Query: 136 HPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPR 195
R PRA A P PG + P P R A PP P A
Sbjct: 143 AAPARAPRAAAAAATAPPSPGP-----------AQPGPRAQRAAPLAAPPPAPAAPPAVA 191
Query: 196 PGDHPRRSP----ALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCATR 244
P PRR+P A RE P PP P ++ + PQPQPPP A R
Sbjct: 192 PPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQ---QPPPPQPQPPPEGGAVR 241
Score = 59.3 bits (142), Expect = 5e-09
Identities = 54/168 (32%), Positives = 59/168 (35%), Gaps = 31/168 (18%)
Query: 89 PARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPHTRYPRAVPEA 148
P R GA + RA A AAAP P P PP P + R PRA A
Sbjct: 101 PPRRGATPPAPPRAPRGAPAAAAAAAPPPT-----PAPPPPPAPVAAAAPARAPRAAAAA 155
Query: 149 TPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPRRSP---- 204
P PG + P P R A PP P A P PRR+P
Sbjct: 156 ATAPPSPGP-----------AQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAV 204
Query: 205 ALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCATRREEDMALR 252
A RE P PP P PQ Q PPPP E A+R
Sbjct: 205 AAREPPLPPPPQPP-----------APPQQQQPPPPQPQPPPEGGAVR 241
Score = 56.6 bits (135), Expect = 3e-08
Identities = 60/178 (33%), Positives = 67/178 (37%), Gaps = 38/178 (21%)
Query: 17 AESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAA 76
A PA PR PR A +AAAAA+ PPP PP AAPA
Sbjct: 106 ATPPAPPRA-----------PRGAPAAAAAAA---PPPTPAPPPPPAPVA----AAAPAR 147
Query: 77 APRLLPRVLAGAPARTGALAGSRL-RAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSR 135
APR P+ A G R RAA AA AAP P +PP PR
Sbjct: 148 APRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAP--------PAVAPPAGPR-- 197
Query: 136 HPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPR--GDPRP 191
RA P A R PP P P + P P + + P E G R G RP
Sbjct: 198 -------RAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARP 248
Score = 43.1 bits (100), Expect = 4e-04
Identities = 49/163 (30%), Positives = 60/163 (36%), Gaps = 35/163 (21%)
Query: 5 KATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSA--------AAAASSSFPPPGF 56
+A A A A P P A P P + +A AAAA+++ PP
Sbjct: 113 RAPRGAPAAAAAAAPPPTP---------APPPPPAPVAAAAPARAPRAAAAAATAPPSPG 163
Query: 57 IHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPT 116
P RA RAAP AAP P AP AG R RA A +E P
Sbjct: 164 PAQPGPRAQ-----RAAPLAAPPPAP----AAPPAVAPPAGPR-RAPPPAVAAREPPLP- 212
Query: 117 GRRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRP 159
P P PP P+ + P P+ PE +R RP
Sbjct: 213 -------PPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARP 248
Score = 40.0 bits (92), Expect = 0.003
Identities = 67/283 (23%), Positives = 90/283 (31%), Gaps = 68/283 (24%)
Query: 4 EKATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSAS---------SAAAAASSSFPPP 54
++A AA PP A PA V G R P P A+ A PPP
Sbjct: 172 QRAAPLAAPPPAPAAPPA---VAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPP 228
Query: 55 GFIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAA 114
PP AV + A P + R + R L G+ G L R++ +E AA
Sbjct: 229 PQPQPPPEGGAVRAGGAARPVSL-REVVRYLGGSGGAGGRLTRGRVQGLL-----EEEAA 282
Query: 115 PTGRRWRRR-----------PGPSPPL--------------------------QPRSRHP 137
GR R R PG +PP +
Sbjct: 283 ARGRLERTRLGALALPRGDRPGRAPPAASARPSRSKRGGEERVLEKEEEEDDDEDEDEED 342
Query: 138 HTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPG 197
VPE+ RP + G +S+ + TP GP +G R P PG
Sbjct: 343 DVSEGSEVPESD--RPAGAQHHQLNGERGPQSAKERVKEWTP--CGPHQGQDEGRGPAPG 398
Query: 198 DHPRRSPALRETPSLSPPSPGRRNGKRAAGKG-TTPQPQPPPP 239
R+ S + + G + G +P P P PP
Sbjct: 399 SGTRQ--------VFSMAAMNKEGGTASVATGPDSPSPVPLPP 433
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 62.0 bits (149), Expect = 8e-10
Identities = 67/244 (27%), Positives = 90/244 (36%), Gaps = 46/244 (18%)
Query: 14 PGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAA 73
PG A SP + P+PR AAAAA + PP PS R+A S+ R
Sbjct: 328 PGSAHSPP--------DKPSSPSPRVRDKAAAAAPT--PPARGKESPSPRSAPSSQGRGG 377
Query: 74 PAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPR 133
AA AG R R + +A+ RR RRRP P+PP R
Sbjct: 378 RAAGG-----------------AGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPP---R 417
Query: 134 SRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRA 193
R+ ++ R PG P S G A+ R PPR P +
Sbjct: 418 GSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKER------PPRARPASTS 471
Query: 194 PRPGDHPRRSPALRETPSLSPP----------SPGRRNGKRAAGKGTTPQPQPPPPPCAT 243
P PG H RR ++ S SP SP + + A + +P P P +
Sbjct: 472 PSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLS 531
Query: 244 RREE 247
R ++
Sbjct: 532 RDKD 535
Score = 42.4 bits (98), Expect = 6e-04
Identities = 68/238 (28%), Positives = 87/238 (36%), Gaps = 48/238 (20%)
Query: 14 PGVAESPARPRVNEQWGSRAHPNPRSASSAAAAAS-------------SSFPPPGFIHP- 59
PG P R + G RA P A A+ + S SS PG HP
Sbjct: 439 PGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPG-PHPR 497
Query: 60 --PSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTG 117
SSR+ SR R+A P + +P+ L SR + A EA A
Sbjct: 498 SWSSSRSPSKSRSRSAEKR-----PHSPSRSPSPKKPL--SRDKDGEGRARHSEAEATRA 550
Query: 118 RRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSR 177
RR R SP + R P PR + A RP P RP S C SS + RS
Sbjct: 551 RR--RSRSYSPIRKRRRDSPSFMEPRRITSARK-RPIPYYRPSPSSSSSCLSSDYSTRSH 607
Query: 178 TPGEAGPPRGDPRPRAPRP----GDHPRRSPALR---ETPSLSP-PSPGRRNGKRAAG 227
+ R+P P G + RS R +PS +P PS R+ + G
Sbjct: 608 S-------------RSPSPGHSHGSYSSRSHGTRSRTRSPSRTPSPSYHSRSSSESGG 652
Score = 28.9 bits (63), Expect = 7.2
Identities = 34/175 (19%), Positives = 55/175 (31%), Gaps = 14/175 (8%)
Query: 93 GALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLR 152
G+ + R + + H ++ + RR RR S + + ++ + P
Sbjct: 194 GSSSPLRKKKKSVKKHRRDRSDSGSRRKRRHRSRSSKCKRKEKNKEKKRPHT-------- 245
Query: 153 PPPGTRPRAKSRPGCRSSPFPAR---SRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRET 209
PG R S S + SR+P P D + RSP+
Sbjct: 246 ESPGRRSHRHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGG 305
Query: 210 PSLSPPSPGRRNGKRAAGKGTTP---QPQPPPPPCATRREEDMALRTRDRTSSRG 261
P +G+R+ G P P P + R D A +RG
Sbjct: 306 SGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARG 360
Score = 28.5 bits (62), Expect = 9.4
Identities = 45/174 (25%), Positives = 58/174 (33%), Gaps = 12/174 (6%)
Query: 159 PRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDH-----PRRSPALRETPS-L 212
P+ G RS R PG A P P +PR D P +E+PS
Sbjct: 311 PQRNGGSGQRSGAHGGR---PGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPR 367
Query: 213 SPPSPGRRNGKRAAGKGTTPQPQPPPPPCATRREEDMALRTRDRTSSRGTVFRAADWGFG 272
S PS R G+ A G G + + R A R R R R R +
Sbjct: 368 SAPSSQGRGGRAAGGAGRRRRRRRRR---RRSRSSASAPRRRGRRRPRPAPPRGSSRSLS 424
Query: 273 RSEQHLRGLTLIISCTLSHKPASLRRSGTQAWGPRGLPLRATPESFKGSPDCTG 326
R+ + + +P S R G + P RA P S SP G
Sbjct: 425 RARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHG 478
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 60.5 bits (145), Expect = 2e-09
Identities = 61/233 (26%), Positives = 80/233 (34%), Gaps = 30/233 (12%)
Query: 14 PGVAESPARPRVNEQWGSRAHPNPRSAS-------SAAAAASSSFPPPGFIHPPSSRAAV 66
P V PA P ++ P P ++ +AAA A+ P P P+ AA+
Sbjct: 113 PLVPAGPAPP------AAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAAL 166
Query: 67 HSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGP 126
+R P P P G PA GA L +AA + AAAP P
Sbjct: 167 AARAGPGPGPGPGPGPGPGPGKPAGPGA--AQTLNGSAALLNSHHAAAPAVSLVNNGPAA 224
Query: 127 SPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPR 186
PL P+ T ++ PP A P S P P A PP
Sbjct: 225 LLPL-----------PKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPP 273
Query: 187 GDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPP 239
RP HP P P++ PP+ + G +AG P P P
Sbjct: 274 PPAPATLARPPGHPAGPPT--AAPAVPPPAAAQNGG--SAGAAPAPAPAAGGP 322
Score = 54.7 bits (130), Expect = 1e-07
Identities = 71/238 (29%), Positives = 93/238 (39%), Gaps = 37/238 (15%)
Query: 11 AAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAA---AASSSFPPPGFIHPPSSRAAVH 67
AAP V ++P P V G+ A P P + S AA AA ++ PPP PP + A +
Sbjct: 232 AAPGTVIQTP--PFV----GAAAPPAPAAPSPPAAPAPAAPAAAPPP----PPPAPATL- 280
Query: 68 SRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPG-- 125
+R PA P P V A A+ G AG AA A A P G + PG
Sbjct: 281 ARPPGHPAGPPTAAPAVPPPAAAQNGGSAG------AAPAPAPAAGGPAGVSGQPGPGAA 334
Query: 126 ---PSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEA 182
P+P ++ S P+ V +A PP + A S P ++ G
Sbjct: 335 AAAPAPGVKAES-------PKRVVQAA----PPAAQTLAASGPASTAASMVIGPTMQGAL 383
Query: 183 GPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPP 240
P P P P P + A T SLS +G RA T P+ P PP
Sbjct: 384 PSPAAVPPPAPGTPTGLP-KGAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPP 440
Score = 54.3 bits (129), Expect = 2e-07
Identities = 71/282 (25%), Positives = 87/282 (30%), Gaps = 48/282 (17%)
Query: 6 ATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPP-PGFIHPPSSRA 64
A AA P PA+P +RA P P P PG + A
Sbjct: 143 AAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSA 202
Query: 65 AV-HSRLRAAPAAA------PRLLPRVLAGAPA---RTGALAGSRLRAAAAAAHDQEAAA 114
A+ +S AAPA + LLP AP +T G+ A AA A A
Sbjct: 203 ALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPA 262
Query: 115 PTGRRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPA 174
P P P PP P +P P A P PPP S G +P PA
Sbjct: 263 PAAPA--AAPPPPPPAPATLARP-PGHPAGPPTAAPAVPPPAAAQNGGSA-GAAPAPAPA 318
Query: 175 RSRTPGEAGPPRGDPRPRAPRPG---DHPRR----------------------------- 202
G +G P AP PG + P+R
Sbjct: 319 AGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPT 378
Query: 203 -SPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCAT 243
AL ++ PP+PG G G Q P T
Sbjct: 379 MQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATT 420
Score = 44.7 bits (104), Expect = 1e-04
Identities = 49/180 (27%), Positives = 61/180 (33%), Gaps = 27/180 (15%)
Query: 65 AVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRP 124
++ S+L A+ A L PR A GAL + + A A AAP P
Sbjct: 28 SLESQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAP 87
Query: 125 GPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGP 184
P P + R + P PL P P AK RP P
Sbjct: 88 EPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRP------------------P 129
Query: 185 PRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRA----AGKGTTPQPQPPPPP 240
P G AP P + A+ P +P P + G A AG G P P P P P
Sbjct: 130 PEGSAGSCAPVPA-----AAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGP 184
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 59.7 bits (143), Expect = 4e-09
Identities = 61/215 (28%), Positives = 76/215 (35%), Gaps = 24/215 (11%)
Query: 30 GSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAP 89
G RSA SA A +S P PG PS A SR PR P P
Sbjct: 136 GKATEAPKRSALSAGARRDTSGPTPG---TPSPAMARRSRAAGTEVGLPRPAPSARPRPP 192
Query: 90 ARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQ-PRSRHPHTRYPRAVPEA 148
G R ++A+ H +P RR RP LQ P SR + A
Sbjct: 193 TE-----GPRKSVSSASEHSTTEPSPAARR---RPSAGGGLQRPASRSLSS-------SA 237
Query: 149 TPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRE 208
TPL P + P A+ P + P + + PP+ P + P P S L
Sbjct: 238 TPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLAT 297
Query: 209 TPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCAT 243
+PPSP + T P P PP AT
Sbjct: 298 PSPSAPPSPSAPPSLQ-----TLPSPPATPPSQAT 327
Score = 55.1 bits (131), Expect = 9e-08
Identities = 74/271 (27%), Positives = 95/271 (35%), Gaps = 48/271 (17%)
Query: 3 REKATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSS 62
R+ E A G + PR SR + R + A +S PG P SS
Sbjct: 55 RKPLAERAGGIGGATIPESAPRAGPTRTSRPPASGRGERAPPAKNTS----PG---PVSS 107
Query: 63 RAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRR 122
R P L R+ A G + R+A +A ++ + PT
Sbjct: 108 PGRASGTTRPGPLGQKGL--RISAEETVARGKATEAPKRSALSAGARRDTSGPT------ 159
Query: 123 RPG-PSPPLQPRSRHPHTRY--PRAVPEATPLRPPPGTRPRAKS-RPGCRSSPFPARSRT 178
PG PSP + RSR T PR P A P P G R S + P PA R
Sbjct: 160 -PGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRR 218
Query: 179 PGEAG-------------------PPRGDPRPR-APRPGDHPRRSPALRETPSLSPP--S 216
P G P R P R PR HP + P + +L PP +
Sbjct: 219 PSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQ-PKPKGLQALRPPQVT 277
Query: 217 PGRRNGKRAAGKGT-----TPQPQPPPPPCA 242
P R++ A G + TP P PP P A
Sbjct: 278 PPRKDAAPALGPLSSSPLATPSPSAPPSPSA 308
Score = 52.8 bits (125), Expect = 5e-07
Identities = 70/278 (25%), Positives = 97/278 (34%), Gaps = 53/278 (19%)
Query: 6 ATEEAAAPPGVA----ESPARPRVNEQWGSRAHPNPRSASSAAA-AASSSFPPPGFIHPP 60
AT APP +A ++P P + A P+P++ ++ A + F PP P
Sbjct: 351 ATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPP-----P 405
Query: 61 SSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRW 120
S P AP P A P A S+ + AA Q +P
Sbjct: 406 SP-----------PVQAPFSPP---ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPA--- 448
Query: 121 RRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPG 180
SPP+ P + P P L PP P A + P ++ P P S PG
Sbjct: 449 ------SPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPAS-FPG 501
Query: 181 EAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQ----- 235
+A P +P P+ P L PPSP +A + TP P
Sbjct: 502 QAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSG 561
Query: 236 ----------PPPP----PCATRREEDMALRTRDRTSS 259
PPPP P +T D+A + TS+
Sbjct: 562 PRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATST 599
Score = 52.4 bits (124), Expect = 6e-07
Identities = 77/283 (27%), Positives = 100/283 (35%), Gaps = 57/283 (20%)
Query: 5 KATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASS---SFP-----PPGF 56
K+ A+ SPA R G P RS SS+A SS S P P
Sbjct: 198 KSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAP 257
Query: 57 IHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPT 116
HP + LR P++ P APA G L+ S L + +A +A P+
Sbjct: 258 AHPSQPKPKGLQALRP-----PQVTPPRKDAAPA-LGPLSSSPLATPSPSAPPSPSAPPS 311
Query: 117 GRRWRRRPGPSPPLQ-------PRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRS 169
+ P +PP Q P + H+ P P +PL PP P A + P ++
Sbjct: 312 LQTLPSPPA-TPPSQATTSLGSPTLQATHSFLPS--PPLSPLATPPPQAPPALALPPLQA 368
Query: 170 SPFPARS------RTPGEAGP-------------PRGDPRPRAP-----RPGDHPRRSPA 205
P P S TP P P P +AP P P +P
Sbjct: 369 PPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPP 428
Query: 206 LRETPSLS------PPSPGRRNGKRAAGKGTTPQPQPPPPPCA 242
+ PSL+ PPSP TP PQ PPP A
Sbjct: 429 SQAPPSLAAPPLQVPPSP---PASPPMSPSATPPPQAPPPLAA 468
Score = 40.4 bits (93), Expect = 0.002
Identities = 70/298 (23%), Positives = 92/298 (30%), Gaps = 79/298 (26%)
Query: 6 ATEEAAAPPGVAESPAR----PRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHP-- 59
AT + APP +A P + P + A P P++ AA PP P
Sbjct: 425 ATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPAL 484
Query: 60 --------PSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQE 111
PS A+ + +P+A+ + P LA P + + L A
Sbjct: 485 ATPPLQALPSPPASFPGQAPFSPSASLPMSP--LATPPPQAPPV----LAAPLLQVPPSP 538
Query: 112 AAAPTGRRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPG----- 166
A+PT + RR P P P PR P PPP +R + + G
Sbjct: 539 PASPTLQAPRRPPTPGPDTSVSG-------PRLTLALAPGPPPPPSRSPSSTLSGPDLAG 591
Query: 167 ----CRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPR---RSPA------------LR 207
S+P R G G P P A HP R PA L
Sbjct: 592 HSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLP 651
Query: 208 ETPSLSP----------------------------PSPGRRNGKRAAGKGTTPQPQPP 237
P+ P PSPG GK AAG G + P
Sbjct: 652 WPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSP 709
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 59.7 bits (143), Expect = 4e-09
Identities = 89/356 (25%), Positives = 132/356 (37%), Gaps = 71/356 (19%)
Query: 3 REKATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSS 62
+E + +A+P +ES + P + + RS SS + S + P S
Sbjct: 1543 QELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSR------LSPRRS 1596
Query: 63 RAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRR 122
R+ ++ P AAPR A++G+ + +A A A + + + + + R
Sbjct: 1597 RSGSSPEVKDKPRAAPR----------AQSGSDSSPEPKAPAPRALPRRSRSGSSSKGR- 1645
Query: 123 RPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFP-ARSRTPGE 181
GPSP + E++P PP +R G RSSP P +SRTP
Sbjct: 1646 --GPSPEGSSST------------ESSPEHPPKSRT----ARRGSRSSPEPKTKSRTPPR 1687
Query: 182 AGPPRGDP------------RPRAPRPGDHPRRSPALRETPSLSPPSPGRRNG------- 222
R P R + P R P R +PS+S P P ++
Sbjct: 1688 RRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRS 1747
Query: 223 ------KRAAGKGTTPQPQP---PPPPCATRREEDMALRTRDRTSSRGTVFRAADWGFGR 273
K + +G +P P+P +RRE+ R RDR+ S + R R
Sbjct: 1748 ASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSR 1807
Query: 274 SE--QHLRGLTLIISCTLSHKPASLRRSGTQAWGPRGLPLRATPESFKGSPDCTGP 327
S + RG S S PA S T + RG R P S K S T P
Sbjct: 1808 SRVTRRRRG----GSGYHSRSPARQESSRTSSRRRRGRS-RTPPTSRKRSRSRTSP 1858
Score = 58.9 bits (141), Expect = 6e-09
Identities = 94/363 (25%), Positives = 140/363 (38%), Gaps = 40/363 (11%)
Query: 3 REKATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSS 62
RE+++ A++P P P + GS P R S + S S PG P +
Sbjct: 1416 RERSSS-ASSPEMKDGLPRTPSRRSRSGSS--PGLRDGSGTPSRHSLSGSSPGMKDIPRT 1472
Query: 63 RAAVHSRLRAAPAA-----APRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTG 117
+ S ++P PR R + L R R+ + ++ DQ+ A T
Sbjct: 1473 PSRGRSECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTP 1532
Query: 118 RRWRRRPGPS------PPLQPRSRHPHTRYPRAVPEA-TPL--RPPPGTRPRAKSRPGCR 168
R R G S P P+ R P + + TPL R G+ P S+ R
Sbjct: 1533 LGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSK--SR 1590
Query: 169 SSPFPARS-RTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAG 227
SP +RS +P PR PR ++ ++PA R P S R+G + G
Sbjct: 1591 LSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRS------RSGSSSKG 1644
Query: 228 KGTTPQPQPPPPPCATRREEDMALRTRDRTSSRGTVFRAADWGFGRSEQHLRGLTLIISC 287
+G P P ++ E + RT+ RG+ R++ +S R + S
Sbjct: 1645 RG-------PSPEGSSSTESSPEHPPKSRTARRGS--RSSPEPKTKSRTPPRRRSSRSSP 1695
Query: 288 TLSHKPASLRRSGTQAWGPRGLPLRATPESFKGSPDCTGPEIGFDMELLRSSLERRPAHS 347
L+ K RRS + + P TP + SP + PE E RSS RR A S
Sbjct: 1696 ELTRKARLSRRSRSASSSPE--TRSRTPPRHRRSPSVSSPE---PAEKSRSSRRRRSASS 1750
Query: 348 SRS 350
R+
Sbjct: 1751 PRT 1753
Score = 53.1 bits (126), Expect = 4e-07
Identities = 68/249 (27%), Positives = 94/249 (37%), Gaps = 29/249 (11%)
Query: 22 RPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRA---APAAAP 78
R R ++WG RS S S S PG+ +++ SR + + +P
Sbjct: 515 RSRSAQRWG-------RSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 567
Query: 79 RLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRP----GPSPPLQPRS 134
R + PAR G R R+ A + PT RR R R G S P
Sbjct: 568 ATRGRSRSRTPARRG-----RSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPAR 622
Query: 135 RHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAP 194
R TR P V + R P R++SR R +RSRTP G R R A
Sbjct: 623 RRSRTRSP--VRRRSRSRSPARRSGRSRSRTPARRGR--SRSRTPARRGRSRS--RTPAR 676
Query: 195 RPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKG----TTPQPQPPPPPCATRREEDMA 250
R G R+PA R P GR + +G TPQ + + R+ +
Sbjct: 677 RSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRT 736
Query: 251 LRTRDRTSS 259
+ R R++S
Sbjct: 737 SQRRSRSNS 745
Score = 47.8 bits (112), Expect = 1e-05
Identities = 71/265 (26%), Positives = 96/265 (36%), Gaps = 42/265 (15%)
Query: 10 AAAPPGV----AESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSR-- 63
A AP V +P P VN A +A +A + S PP +P SSR
Sbjct: 2276 AVAPSAVNLADPRTPTAPAVN-----LAGARTPAALAALSLTGSGTPPTAANYPSSSRTP 2330
Query: 64 -AAVHSRL---RAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRR 119
A + L R+A A AP + A +L +R+ A + A+ P
Sbjct: 2331 QAPASANLVGPRSAHATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSAY 2390
Query: 120 WRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTP 179
R SPPL R+R +R P + P + + T RA S P R P++S P
Sbjct: 2391 ERVSGRTSPPLLDRAR---SRTPPSAPSQSRM-----TSERAPS-PSSRMGQAPSQSLLP 2441
Query: 180 GEAGPPRGDPRPRA-------------PRPGDHPRRSPALRETPSLSPPSPGRRNGKRAA 226
PR P P A P G S A+ T S S G NG +
Sbjct: 2442 PAQDQPR-SPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTS----SAGDHNGMLSV 2496
Query: 227 GKGTTPQPQPPPPPCATRREEDMAL 251
P PP +T ++ AL
Sbjct: 2497 PAPGVPHSDVGEPPASTGAQQPSAL 2521
Score = 47.4 bits (111), Expect = 2e-05
Identities = 75/310 (24%), Positives = 108/310 (34%), Gaps = 61/310 (19%)
Query: 74 PAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAA--APTGRRWRRRPGPSPPLQ 131
PA R R + A + + SR R+AAA H A +P+ RR G +P +
Sbjct: 253 PAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSE 312
Query: 132 PRSRHPHTRYPRAVPEAT--PLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPR--- 186
P + T+ P + AT P P K + R SP P RS T E P
Sbjct: 313 PGTTS--TQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLL 370
Query: 187 -----GDPRPRAPRPGDHPRRSPALRETPSL-------------------SPPSPG-RRN 221
G P+P A P +P +P+ SPPSP +
Sbjct: 371 AERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKV 430
Query: 222 GKRAAGKGTTPQPQPPPPPCATRREEDMALRTRDRTSSRGTVFRAADWGFGRSEQHLRGL 281
+ A+ +P+P P P + RE + +++R+ R R + H
Sbjct: 431 SRHASSSPESPKPAPAP---GSHREISSSPTSKNRSHGRAK----------RDKSH---- 473
Query: 282 TLIISCTLSHKPA-SLRRSGTQAWGPRGLPLRATPESFKGSPDCTGPEIGFDMELLRSSL 340
SH P+ + RS + A RG TP +G P+ R
Sbjct: 474 --------SHTPSRRMGRSRSPATAKRGRSRSRTPTK-RGHSRSRSPQWRRSRSAQRWGR 524
Query: 341 ERRPAHSSRS 350
R P RS
Sbjct: 525 SRSPQRRGRS 534
Score = 47.4 bits (111), Expect = 2e-05
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 20/242 (8%)
Query: 6 ATEEAAAPPGVAE-SPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRA 64
A+ A P +A PA+ R + S + + S+SS+++++SSS S
Sbjct: 2511 ASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPV 2570
Query: 65 AVHSRLRAAPAAAPRLLPRVLAGAP--------ARTGALAGSRLRAAAAAAHDQEAAAPT 116
L+ P+ P V G P R + + S ++++++ +++ +
Sbjct: 2571 QPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSS 2630
Query: 117 GRRWRRRPGPSPPLQPRSRHPHTRYPRAVPE-ATPLRPPPG-TRPRAKSRPGCRSSPFPA 174
S S P P+A+P+ A+P +PPPG R R+ +P +
Sbjct: 2631 SSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRS 2690
Query: 175 RSRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQP 234
S +P E P P PR + R S + S SP RR TP P
Sbjct: 2691 LSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRRRE---------TPSP 2741
Query: 235 QP 236
+P
Sbjct: 2742 RP 2743
Score = 43.9 bits (102), Expect = 2e-04
Identities = 78/321 (24%), Positives = 107/321 (33%), Gaps = 54/321 (16%)
Query: 7 TEEAAAPPGVAESPAR-----------PRVNEQWGSRAHPNPRSASSAAAAASSS---FP 52
++E PP A SP R P+ + S P P S A+++ S P
Sbjct: 387 SQEPVNPPSEA-SPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAP 445
Query: 53 PPG----FIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAH 108
PG P+S+ H R + + + R+ T SR R H
Sbjct: 446 APGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGH 505
Query: 109 DQEAA-----APTGRRWRRRPGPS------PPLQP---RSRHPHTR-YPRAVPEATPLRP 153
+ + + + +RW R P P +P RSR+ R R+
Sbjct: 506 SRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSR 565
Query: 154 PPGTRPRAKSRPGCRS--------------SPFPARSRTPGEAGPPRGDPRPRAPRPGDH 199
P TR R++SR R S P R R+ RG R R P
Sbjct: 566 SPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRS 625
Query: 200 PRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCATRREEDMALRTRDRTSS 259
RSP R + S SP RR+G+ + TP + R RT R S
Sbjct: 626 RTRSPVRRRSRS---RSPARRSGR---SRSRTPARRGRSRSRTPARRGRSRSRTPARRSG 679
Query: 260 RGTVFRAADWGFGRSEQHLRG 280
R A G RS RG
Sbjct: 680 RSRSRTPARRGRSRSRTPRRG 700
Score = 42.4 bits (98), Expect = 6e-04
Identities = 68/250 (27%), Positives = 100/250 (40%), Gaps = 40/250 (16%)
Query: 23 PRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAAAPRL-L 81
P+ + GS + +S +S + S+S P S R+ S R+ A RL L
Sbjct: 718 PQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSK--AKSRLSL 775
Query: 82 PRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPHTR- 140
R L+G+ + + R + + + +A + T R R R SPP + +S+ P +
Sbjct: 776 RRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPR-RSRSSSSPPPKQKSKTPSRQS 834
Query: 141 ------YPRAVPEATPLRPPPGTRPRAKS------RPGC-RSSPFPA-RSRTPGE----- 181
+P+ V TP R T P+A R C SSP P +SRTP
Sbjct: 835 HSSSSPHPK-VKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSG 893
Query: 182 --------AGPPRGDP-RPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTP 232
+ PPR P R +P+P SP R S PSP R + TTP
Sbjct: 894 SSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSR------TTP 947
Query: 233 QPQPPPPPCA 242
+ PC+
Sbjct: 948 RRSRSVSPCS 957
Score = 40.8 bits (94), Expect = 0.002
Identities = 89/353 (25%), Positives = 125/353 (35%), Gaps = 42/353 (11%)
Query: 33 AHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVH--SRLRAAPAAAPRLLPRVLAGAPA 90
A P P +++ AA S P P + + A + SR+ AA AAA L P
Sbjct: 2193 ARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAIPT 2252
Query: 91 RTGALAGSRLRAAAAA---AHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPHTRYPRAVPE 147
LA SR AAAAA A + A AP+ P P P R P A+
Sbjct: 2253 AVN-LADSRTPAAAAAMNLASPRTAVAPSA---VNLADPRTPTAPAVNLAGARTPAAL-- 2306
Query: 148 ATPLRPPPGTRPRAKSRPGCRSSP-FPARSRTPGEAGPPRGDP---------RPRAPRPG 197
A GT P A + P +P PA + G P AP
Sbjct: 2307 AALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRTAAALAPASL 2366
Query: 198 DHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTP------QPQPPPPPCATRREEDMAL 251
R +PAL SP P +R +G+ + P PP P +R + A
Sbjct: 2367 TSARMAPALSGANLTSPRVP-LSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAP 2425
Query: 252 RTRDR---TSSRGTVFRAADW-------GFGRSEQHLRGLTLIISCTLSHKPASLRRSGT 301
R S+ + A D F + L T ++ + S ++ + +
Sbjct: 2426 SPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTS 2485
Query: 302 QAWGPRGL---PLRATPESFKGSPDC-TGPEIGFDMELLRSSLERRPAHSSRS 350
A G+ P P S G P TG + + L+ + ERR + SS S
Sbjct: 2486 SAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSS 2538
Score = 40.0 bits (92), Expect = 0.003
Identities = 67/280 (23%), Positives = 94/280 (33%), Gaps = 47/280 (16%)
Query: 13 PPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRA 72
PP SP+ SR+ RSASS +S G P R SR R+
Sbjct: 1721 PPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSR---RGRSPSPKPRGLQRSRSRS 1777
Query: 73 APAAAPRLLPRVLAGAPARTGAL---------------AGSRLRAAAAAAHDQEAAAPTG 117
R +G+ T GS + + A + +
Sbjct: 1778 RREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRR 1837
Query: 118 RRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSR 177
RR R R P+ + RSR + R+ A+ P T R++SR +P +R R
Sbjct: 1838 RRGRSRTPPTSRKRSRSRTSPAPWKRSRSRAS-----PATHRRSRSR-----TPLISRRR 1887
Query: 178 TPGEAGP---PRGDPRPRAPRPGDHPRRSP-ALRETPSLSPPSPGRRNGKRAAGKGTTPQ 233
+ P R R R R SP + R + S +PP RR+ R +
Sbjct: 1888 SRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR 1947
Query: 234 PQPPP----------PPCATRREEDMA-----LRTRDRTS 258
+ PP PP RR R+R RTS
Sbjct: 1948 SRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTS 1987
Score = 35.8 bits (81), Expect = 0.059
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 173 PARSRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRE---TP---SLSPPSPGRRNGKRAA 226
P+R R+ + P D PR P SP LR+ TP SLS SPG ++ R
Sbjct: 1414 PSRERSSSASSPEMKDGLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTP 1473
Query: 227 GKGTTPQPQPPPP 239
+G + P P
Sbjct: 1474 SRGRSECDSSPEP 1486
Score = 34.7 bits (78), Expect = 0.13
Identities = 53/218 (24%), Positives = 74/218 (33%), Gaps = 24/218 (11%)
Query: 17 AESPARPRVNEQWGSRAHP----NPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRA 72
+ S A P + SR P RS + S S PP SR +R R+
Sbjct: 1911 SRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRS 1970
Query: 73 APAAAP--------RLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRP 124
+P R P + +RT + R R+ + + + + T RRR
Sbjct: 1971 RSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRS 2030
Query: 125 GPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGP 184
PL PR R +R P A+ + R P R + R RS P R G +
Sbjct: 2031 RSRTPLLPRKR-SRSRSPLAIRRRSRSRTPRTARGK---RSLTRSPPAIRRRSASGSSSD 2086
Query: 185 PRGDPRPRAPRPGDHPRRSPALRET--------PSLSP 214
P A R R P + PS+SP
Sbjct: 2087 RSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSP 2124
Score = 31.2 bits (69), Expect = 1.4
Identities = 47/231 (20%), Positives = 79/231 (34%), Gaps = 45/231 (19%)
Query: 39 SASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGA-PA---RTGA 94
S+ + A SS+ G + P+ HS + PA+ P LA PA R+ +
Sbjct: 2476 SSGAVATTTSSAGDHNGMLSVPAP-GVPHSDVGEPPASTGAQQPSALAALQPAKERRSSS 2534
Query: 95 LAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPP 154
+ S ++++++ +++ +G G S P+QP E R P
Sbjct: 2535 SSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQP--------------EVALKRVP 2580
Query: 155 PGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSP 214
SP PA E PP P R R S + + S S
Sbjct: 2581 ---------------SPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSS 2625
Query: 215 PSPGRRNGKRAAGKGTT-----------PQPQPPPPPCATRREEDMALRTR 254
S + ++ ++ P PQ P P + ++ R+R
Sbjct: 2626 SSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSR 2676
Score = 30.0 bits (66), Expect = 3.2
Identities = 34/141 (24%), Positives = 54/141 (38%), Gaps = 34/141 (24%)
Query: 6 ATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAA 65
++ +++ + SPA+P G +A P P AS PPPG S R
Sbjct: 2637 SSSSSSSSSSSSPSPAKP------GPQALPKP---------ASPKKPPPGERRSRSPRKP 2681
Query: 66 VHS-----RLRAAPAA----APRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPT 116
+ S L +P +P+ PR + + G+ G R ++ +P+
Sbjct: 2682 IDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQR----------GDSRSPS 2731
Query: 117 GRRWRRRPGPSPPLQPRSRHP 137
+R R P P P SR P
Sbjct: 2732 HKRRRETPSPRPMRHRSSRSP 2752
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 58.9 bits (141), Expect = 6e-09
Identities = 62/221 (28%), Positives = 80/221 (36%), Gaps = 26/221 (11%)
Query: 30 GSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAP 89
G RSA SA A +S P PG PS A SR PR P P
Sbjct: 145 GKATEAPKRSALSAGARRDTSGPTPG---TPSPAMARRSRAAGTEVGLPRPAPSARPRPP 201
Query: 90 ARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQ-PRSRHPHTRYPRAVPEA 148
G R ++A+ H +P RR RP LQ P SR + A
Sbjct: 202 TE-----GPRKSVSSASEHSTTEPSPAARR---RPSAGGGLQRPASRSLSS-------SA 246
Query: 149 TPLRPPPGTRPRAKSRPGCRSSPFPARSR-----TPGEAGPPRGDPRPRAPRPGDHPRRS 203
TPL P + P A+ P + P + + P + PPR D P P +
Sbjct: 247 TPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLAT 306
Query: 204 PA-LRETPSLSPPS-PGRRNGKRAAGKGTTPQPQPPPPPCA 242
P+ S +PP+ P + + TP P PP P A
Sbjct: 307 PSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSA 347
Score = 52.8 bits (125), Expect = 5e-07
Identities = 70/278 (25%), Positives = 97/278 (34%), Gaps = 53/278 (19%)
Query: 6 ATEEAAAPPGVA----ESPARPRVNEQWGSRAHPNPRSASSAAA-AASSSFPPPGFIHPP 60
AT APP +A ++P P + A P+P++ ++ A + F PP P
Sbjct: 390 ATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPP-----P 444
Query: 61 SSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRW 120
S P AP P A P A S+ + AA Q +P
Sbjct: 445 SP-----------PVQAPFSPP---ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPA--- 487
Query: 121 RRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPG 180
SPP+ P + P P L PP P A + P ++ P P S PG
Sbjct: 488 ------SPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPAS-FPG 540
Query: 181 EAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQ----- 235
+A P +P P+ P L PPSP +A + TP P
Sbjct: 541 QAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSG 600
Query: 236 ----------PPPP----PCATRREEDMALRTRDRTSS 259
PPPP P +T D+A + TS+
Sbjct: 601 PRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATST 638
Score = 48.1 bits (113), Expect = 1e-05
Identities = 72/272 (26%), Positives = 96/272 (35%), Gaps = 66/272 (24%)
Query: 40 ASSAAAAASSSFPPPGFI--HPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPA------- 90
A + AAA + + PG + PP S R P P L RVL A A
Sbjct: 8 AKAGAAARTPAARAPGLLTPRPPGSP-------RPPPPVTPAAL-RVLGAAGAVGRKPLA 59
Query: 91 -RTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRS-RHPHTRYPRAVPEA 148
R G + G+ + +A A +A + R P PP R R P + P +
Sbjct: 60 ERAGGIGGATIPESAPRAGPTRSAGTSSRN----PASRPPASGRGERAPPAKNTSPGPVS 115
Query: 149 TPLRPPPGTRPRAKSRPGCRSS----------------------------------PFPA 174
+P R TRP + G R S P PA
Sbjct: 116 SPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPA 175
Query: 175 ---RSRTPG-EAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGT 230
RSR G E G PR P R P + PR+S + S + PSP R + +AG G
Sbjct: 176 MARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARR-RPSAGGGL 234
Query: 231 TPQPQPPPPPCATRREEDMALRTRDRTSSRGT 262
Q P + ++ R S+RGT
Sbjct: 235 ----QRPASRSLSSSATPLSSPARSGPSARGT 262
Score = 45.8 bits (107), Expect = 6e-05
Identities = 65/260 (25%), Positives = 85/260 (32%), Gaps = 53/260 (20%)
Query: 31 SRAHPNPRSASSAAAAASSSFP-------PPGFIHPPSSRAAVHSRLRAAPAAAPRLLPR 83
+R+ P+ R A A S P PP P A L ++P A P
Sbjct: 253 ARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAA 312
Query: 84 VLAGAPARTGALAGSRLRAAAAAAH----DQEAAAPTGRRWRRRPGPSPPLQ-------P 132
+ + AP A S A +AP + P +PP Q P
Sbjct: 313 LQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSP 372
Query: 133 RSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARS------RTPGEAGP-- 184
+ H+ P P +PL PP P A + P ++ P P S TP P
Sbjct: 373 TLQATHSFLPS--PPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNA 430
Query: 185 -----------PRGDPRPRAP-----RPGDHPRRSPALRETPSLS------PPSPGRRNG 222
P P +AP P P +P + PSL+ PPSP
Sbjct: 431 LAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSP---PA 487
Query: 223 KRAAGKGTTPQPQPPPPPCA 242
TP PQ PPP A
Sbjct: 488 SPPMSPSATPPPQAPPPLAA 507
Score = 40.4 bits (93), Expect = 0.002
Identities = 70/298 (23%), Positives = 92/298 (30%), Gaps = 79/298 (26%)
Query: 6 ATEEAAAPPGVAESPAR----PRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHP-- 59
AT + APP +A P + P + A P P++ AA PP P
Sbjct: 464 ATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPAL 523
Query: 60 --------PSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQE 111
PS A+ + +P+A+ + P LA P + + L A
Sbjct: 524 ATPPLQALPSPPASFPGQAPFSPSASLPMSP--LATPPPQAPPV----LAAPLLQVPPSP 577
Query: 112 AAAPTGRRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPG----- 166
A+PT + RR P P P PR P PPP +R + + G
Sbjct: 578 PASPTLQAPRRPPTPGPDTSVSG-------PRLTLALAPGPPPPPSRSPSSTLSGPDLAG 630
Query: 167 ----CRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPR---RSPA------------LR 207
S+P R G G P P A HP R PA L
Sbjct: 631 HSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLP 690
Query: 208 ETPSLSP----------------------------PSPGRRNGKRAAGKGTTPQPQPP 237
P+ P PSPG GK AAG G + P
Sbjct: 691 WPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSP 748
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 58.9 bits (141), Expect = 6e-09
Identities = 62/251 (24%), Positives = 89/251 (35%), Gaps = 25/251 (9%)
Query: 13 PPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRA 72
PPG + P N+ SR+ P PPP PP +
Sbjct: 155 PPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPP----PPGKPQGPPPQGGN 210
Query: 73 APAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQP 132
P P G P ++ ++A + + P G + P P PP +P
Sbjct: 211 KPQGPPP------PGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGP-PPPPGKP 263
Query: 133 RSRHPH--TRYPRAVPEATPLRPPP--GTRPRA-KSRPGCRSSPFPARSRTPGEAGPPRG 187
+ P + P P PPP G++ R+ +S PG P P P PP G
Sbjct: 264 QGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPG 323
Query: 188 DPRPRAPRPGDHPRRSPALRETPSLSPPSPGR--RNGKRAAGKGTTP------QPQPPPP 239
P+ P+ G+ P+ P + P PP G R+ + GK P PQ PPP
Sbjct: 324 KPQGPPPQGGNKPQGPPPPGK-PQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPP 382
Query: 240 PCATRREEDMA 250
P ++ A
Sbjct: 383 PAGGNPQQPQA 393
Score = 57.0 bits (136), Expect = 2e-08
Identities = 59/244 (24%), Positives = 83/244 (34%), Gaps = 31/244 (12%)
Query: 12 APPGVAESPARPRVNEQWGSRAHPN-PRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRL 70
+PPG + P N+ G P P+ PPPG P + SR
Sbjct: 113 SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRS 172
Query: 71 RAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPL 130
+P P+ G P + G++ + + P G + GP PP
Sbjct: 173 SRSPPGKPQ-------GPPPQ----GGNQPQGPPPPPGKPQGPPPQGGN--KPQGPPPPG 219
Query: 131 QPRSRHP---HTRYPRAVPEATPLRPPP--GTRPRAKSRPGCRSSPFPARSRTPGEAGPP 185
+P+ P + P P PPP G +P+ P + P + + PP
Sbjct: 220 KPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPP 279
Query: 186 RGDPRPRAPRPGDHPRRS-----------PALRETPSLSPPSPGRRNGKRAAGKGTTPQP 234
G P+ P+ G R S P P PP PG+ G G G PQ
Sbjct: 280 PGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG-GNKPQG 338
Query: 235 QPPP 238
PPP
Sbjct: 339 PPPP 342
Score = 53.9 bits (128), Expect = 2e-07
Identities = 48/182 (26%), Positives = 69/182 (37%), Gaps = 35/182 (19%)
Query: 82 PRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPH--T 139
P ++AG P G++ + + + P G + P P PP +P+ P
Sbjct: 29 PSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGP-PPPPGKPQGPPPQGGN 87
Query: 140 RYPRAVPEATPLRPPP-GTRPRA-KSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPG 197
+ P P PPP G + R+ +S PG P P P PP G P+ P+ G
Sbjct: 88 KPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG 147
Query: 198 DHPRRSPALRETPSLSPPSPGR------------RNGKRAAGKGTTPQPQ-------PPP 238
+ P+ PP PG+ R+ + GK P PQ PPP
Sbjct: 148 NKPQ-----------GPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPP 196
Query: 239 PP 240
PP
Sbjct: 197 PP 198
Score = 52.4 bits (124), Expect = 6e-07
Identities = 43/130 (33%), Positives = 54/130 (41%), Gaps = 18/130 (13%)
Query: 125 GPSPPLQPRSRHPH---TRYPRAVPEATPLRPPP--GTRPRAKSRP-GCRSSPFPARSRT 178
GP PP +P+ P +R PR+ P P PPP G +P+ P G P P
Sbjct: 91 GPPPPGKPQGPPPQGDKSRSPRS-PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK 149
Query: 179 PG--------EAGPPRGDPRPRAPR--PGDHPRRSPALRETPSLSPPSPGRRNGKRAAGK 228
P + PP+GD + R+ R PG P P PP PG+ G G
Sbjct: 150 PQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG- 208
Query: 229 GTTPQPQPPP 238
G PQ PPP
Sbjct: 209 GNKPQGPPPP 218
Score = 49.7 bits (117), Expect = 4e-06
Identities = 54/247 (21%), Positives = 81/247 (32%), Gaps = 18/247 (7%)
Query: 4 EKATEEAAAPPGVAESPARPRVNEQWGSRAHPN-PRSASSAAAAASSSFPPPGFIHPPSS 62
+ + + +PPG + P N+ G P P+ PPPG P
Sbjct: 167 DNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP 226
Query: 63 RAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRR 122
+ S+ +P P+ P P G + + P G+
Sbjct: 227 QGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP--- 283
Query: 123 RPGPSPPLQPRSRHPHTRYPRAVPEATPLR--------PPPGTRPRAKSRPGCRSSPFPA 174
PP Q S+ +R P P+ P + PPP +P+ G P
Sbjct: 284 ---QGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPP 340
Query: 175 RSRTPGEAGPPRGDPRPRAPR-PGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQ 233
P + PP+G + R+ R P P+ P PP P N ++ Q
Sbjct: 341 PPGKP-QGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP-PAGQ 398
Query: 234 PQPPPPP 240
PQ PP P
Sbjct: 399 PQGPPRP 405
Score = 48.1 bits (113), Expect = 1e-05
Identities = 35/124 (28%), Positives = 49/124 (39%), Gaps = 9/124 (7%)
Query: 121 RRRPGPSPPLQPRSRHPHT-RYPRAVPE--ATPLRPPP--GTRPRAKSRPGCRSSPFPAR 175
+ R SPP +P+ P P+ P P PPP G +P+ PG P P
Sbjct: 107 KSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 166
Query: 176 SRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQ 235
+ P G P+ P+ G+ P+ P P P P + G + G +PQ
Sbjct: 167 DNKSRSSRSPPGKPQGPPPQGGNQPQGPP----PPPGKPQGPPPQGGNKPQGPPPPGKPQ 222
Query: 236 PPPP 239
PPP
Sbjct: 223 GPPP 226
Score = 44.7 bits (104), Expect = 1e-04
Identities = 50/209 (23%), Positives = 70/209 (33%), Gaps = 17/209 (8%)
Query: 13 PPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRA 72
PPG + P N+ +R+ P PPP PP +
Sbjct: 217 PPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPP----PPGKPQGPPPQGGN 272
Query: 73 APAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQP 132
P P G P GS+ R++ + + P G + P P PP +P
Sbjct: 273 KPQGPPP------PGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGP-PPPPGKP 325
Query: 133 RSRHPHT-RYPRAVPEATPLRPPPGTRPRAKSRP-GCRSSPFPARSRTPGEAGPPRGDPR 190
+ P P+ P P P G P+ S+ RS P + E P+G P
Sbjct: 326 QGPPPQGGNKPQGPP---PPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPP 382
Query: 191 PRAPRPGDHPRRSPALRETPSLSPPSPGR 219
P P P+ PA + PP GR
Sbjct: 383 PAGGNP-QQPQAPPAGQPQGPPRPPQGGR 410
Score = 35.0 bits (79), Expect = 0.10
Identities = 44/189 (23%), Positives = 60/189 (31%), Gaps = 30/189 (15%)
Query: 4 EKATEEAAAPPGVAESPARPRVNEQWGSRAHPN-PRSASSAAAAASSSFPPPGFIHPPSS 62
+ ++ A +PPG + P N+ G P P+ PPPG P
Sbjct: 229 DNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP 288
Query: 63 RAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTG----- 117
+ SR +P P+ P P G + + P G
Sbjct: 289 QGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP 348
Query: 118 --------RRWRRRPG-PSPPLQPRSRHP---------HTRYPRAVPEATPL---RPPPG 156
R R PG P P Q +P + + P+A P P RPP G
Sbjct: 349 PPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQG 408
Query: 157 TRPRAKSRP 165
RP SRP
Sbjct: 409 GRP---SRP 414
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 58.5 bits (140), Expect = 8e-09
Identities = 62/232 (26%), Positives = 86/232 (37%), Gaps = 22/232 (9%)
Query: 10 AAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSR 69
+ PP P P + A P P S +A A S ++ + P + R + +
Sbjct: 1125 STTPPAATILPKGPPAP----ATATPAPTSPFPSATAGSMTY---SLVAPKAQRPSPKAP 1177
Query: 70 LRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPP 129
+ A A + AGA R G L +E AP + P+PP
Sbjct: 1178 QKVKAAIASIPVGSFEAGASGRPGPAPRQPLEPGPV----REPTAPESELEGQPTPPAPP 1233
Query: 130 LQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARS---RTPGEAGPPR 186
P + P R + PL PP R AK P +S FP+ S R PG+ R
Sbjct: 1234 PLPETWTPTAR------SSPPLPPPAEERTSAKG-PETMASKFPSSSSDWRVPGQGLENR 1286
Query: 187 GDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPP 238
G+P P P P P +P S + K AAG G + +PPP
Sbjct: 1287 GEP-PTPPSPAPAPAVAPGGSSESSSGRAAGDTPERKEAAGTGKKVKVRPPP 1337
Score = 47.8 bits (112), Expect = 1e-05
Identities = 60/244 (24%), Positives = 83/244 (34%), Gaps = 47/244 (19%)
Query: 13 PPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRA 72
PP A +P P + + +P SSA A S PP + V++ +
Sbjct: 1081 PPACA-APGGPVITAFYSG----SPAPTSSAPLAQPSQAPP----------SLVYTVATS 1125
Query: 73 APAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQP 132
A +LP+ APA S +A A + AP +R PSP
Sbjct: 1126 TTPPAATILPKG-PPAPATATPAPTSPFPSATAGSMTYSLVAPKAQR------PSPKAPQ 1178
Query: 133 RSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPR 192
+ + P EA PG PR PG P S G+ PP P P
Sbjct: 1179 KVKAAIASIPVGSFEAGA-SGRPGPAPRQPLEPGPVREPTAPESELEGQPTPPAPPPLPE 1237
Query: 193 APRPGDHPRRSPALRETPSLSPPSPGRRNGK----------------RAAGKGTTPQPQP 236
+P R +P L PP+ R + K R G+G + +P
Sbjct: 1238 T--------WTPTARSSPPLPPPAEERTSAKGPETMASKFPSSSSDWRVPGQGLENRGEP 1289
Query: 237 PPPP 240
P PP
Sbjct: 1290 PTPP 1293
Score = 35.0 bits (79), Expect = 0.10
Identities = 30/105 (28%), Positives = 37/105 (35%), Gaps = 26/105 (24%)
Query: 139 TRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGD 198
T P P+ PP GT ++P P S P G P P +P
Sbjct: 1525 TEQPPGAEAPLPVPPPTGT----------AAAPAPTPS--------PAGGPDPTSPSSD- 1565
Query: 199 HPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCAT 243
S + P L PP +G G PQP PPPP +T
Sbjct: 1566 ----SGTAQAAPPLPPPP---ESGPGQPGWEGAPQPSPPPPGPST 1603
Score = 33.9 bits (76), Expect = 0.22
Identities = 29/95 (30%), Positives = 35/95 (36%), Gaps = 12/95 (12%)
Query: 148 ATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPRRSPALR 207
ATP PPG P ++ PA TP AG P DP + G + +P L
Sbjct: 1522 ATPTEQPPGAEAPLPVPPPTGTAAAPAP--TPSPAGGP--DPTSPSSDSGT-AQAAPPLP 1576
Query: 208 ETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCA 242
P P PG + P P PP P A
Sbjct: 1577 PPPESGPGQPGWEGAPQ-------PSPPPPGPSTA 1604
Score = 33.1 bits (74), Expect = 0.38
Identities = 31/113 (27%), Positives = 42/113 (37%), Gaps = 16/113 (14%)
Query: 122 RRPGPSPPLQPRSRHP-------HTRYPRAVPEATPLRPPPGTRPRAKSRPG-------C 167
++P P +S+ P H R P A P RPP T P + PG
Sbjct: 59 QQPASHPVASNQSKEPAESAAVAHERPPGGTGSADPERPPGATCPESPG-PGPPHPLGVV 117
Query: 168 RSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRR 220
S P + T EA P G+PR + DH ++ P PG+R
Sbjct: 118 ESGKGPPPT-TEEEASGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKR 169
Score = 29.3 bits (64), Expect = 5.5
Identities = 22/71 (30%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Query: 59 PPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGR 118
PP + A + AAAP P AG P T + S AA + P
Sbjct: 1528 PPGAEAPLPVPPPTGTAAAPAPTPSP-AGGPDPTSPSSDSGTAQAAPPLPPPPESGPGQP 1586
Query: 119 RWRRRPGPSPP 129
W P PSPP
Sbjct: 1587 GWEGAPQPSPP 1597
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 57.4 bits (137), Expect = 2e-08
Identities = 74/277 (26%), Positives = 96/277 (34%), Gaps = 61/277 (22%)
Query: 14 PGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSR---- 69
PG P P+ N P PR + S PPP P +++ H+R
Sbjct: 155 PGHRSGPPEPQRNRM------PPPRPD---VGSKPDSIPPPVPSTPRPIQSSPHNRGSPP 205
Query: 70 -----LRAAPAAAPRLLP----RVLAGAPARTGALAGSR-------LRAAAAAAHDQEAA 113
+ +P P P L G R L+ S L + A D +
Sbjct: 206 VPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPP 265
Query: 114 AP---TGRR---WRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPP---GTRPRAKSR 164
P G R R P PP + P T P A +A P PPP G P S
Sbjct: 266 PPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSS 325
Query: 165 PGCRSSP-FPARSRTPGEAGPPRGDPR---PRAPRPGDHPRRSPALRETPS----LSPPS 216
G +P P R+ + + PP P P P P + P P +R+ P L PP
Sbjct: 326 SGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERP--PPPVRDPPGRSGPLPPPP 383
Query: 217 PGRRNGKRAAGKGTTPQ-------------PQPPPPP 240
P RNG + TPQ P+PP PP
Sbjct: 384 PVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPP 420
Score = 48.9 bits (115), Expect = 7e-06
Identities = 62/212 (29%), Positives = 73/212 (34%), Gaps = 41/212 (19%)
Query: 13 PPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRA 72
PP V P+ R + P S+ +ASS PPP PP SR
Sbjct: 268 PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP---PPPSRPG------- 317
Query: 73 APAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQP 132
P LP P+ +G RL + P+ R GP PP
Sbjct: 318 -----PPPLP------PSSSGNDETPRLPQRNLSLSSSTPPLPSPGR----SGPLPPPPS 362
Query: 133 RSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAG--PPRGDPR 190
P R P + PL PPP SR G S PA + P +G PR PR
Sbjct: 363 ERPPPPVRDPPG--RSGPLPPPPPV-----SRNGSTSRALPATPQLPSRSGVDSPRSGPR 415
Query: 191 PRAPRPGDHPRRSPALRETPSLSPPSPGRRNG 222
P P P D P P PPS RNG
Sbjct: 416 P--PLPPDRPSAG-----APPPPPPSTSIRNG 440
Score = 43.5 bits (101), Expect = 3e-04
Identities = 42/126 (33%), Positives = 46/126 (36%), Gaps = 17/126 (13%)
Query: 124 PGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAG 183
P PS P +P PH R VP P +P PG P PFP T G
Sbjct: 186 PVPSTP-RPIQSSPHNRGSPPVPGG-PRQPSPGPTP----------PPFPGNRGTALGGG 233
Query: 184 PPRGDP----RPRAPRPGDHPRRSPALRETPSLSPPSPGRRNG-KRAAGKGTTPQPQPPP 238
R P P + RP P S AL + P PP G R R A PQ PP
Sbjct: 234 SIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPP 293
Query: 239 PPCATR 244
P R
Sbjct: 294 VPSTPR 299
Score = 39.7 bits (91), Expect = 0.004
Identities = 53/199 (26%), Positives = 68/199 (34%), Gaps = 30/199 (15%)
Query: 87 GAPARTGAL--AGS-RLRAAAAAAHDQEAAAPT-----GRRWRRRPGPSPPLQPRSRHPH 138
G P G L AG +LR+ A +D + P GR +P P R P
Sbjct: 95 GGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPS 154
Query: 139 TRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGD 198
+ PE R PP RP S P P P + P R P
Sbjct: 155 PGHRSGPPEPQRNRMPP-------PRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVP 207
Query: 199 HPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQP----------QPPPPPCATRREED 248
R P+ TP PP PG R A G G+ Q +PP PP +R +D
Sbjct: 208 GGPRQPSPGPTP---PPFPGNRG--TALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDD 262
Query: 249 MALRTRDRTSSRGTVFRAA 267
+R ++ R A
Sbjct: 263 KPPPPPPPVGNRPSIHREA 281
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 57.4 bits (137), Expect = 2e-08
Identities = 74/277 (26%), Positives = 96/277 (34%), Gaps = 61/277 (22%)
Query: 14 PGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSR---- 69
PG P P+ N P PR + S PPP P +++ H+R
Sbjct: 155 PGHRSGPPEPQRNRM------PPPRPD---VGSKPDSIPPPVPSTPRPIQSSPHNRGSPP 205
Query: 70 -----LRAAPAAAPRLLP----RVLAGAPARTGALAGSR-------LRAAAAAAHDQEAA 113
+ +P P P L G R L+ S L + A D +
Sbjct: 206 VPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPP 265
Query: 114 AP---TGRR---WRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPP---GTRPRAKSR 164
P G R R P PP + P T P A +A P PPP G P S
Sbjct: 266 PPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSS 325
Query: 165 PGCRSSP-FPARSRTPGEAGPPRGDPR---PRAPRPGDHPRRSPALRETPS----LSPPS 216
G +P P R+ + + PP P P P P + P P +R+ P L PP
Sbjct: 326 SGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERP--PPPVRDPPGRSGPLPPPP 383
Query: 217 PGRRNGKRAAGKGTTPQ-------------PQPPPPP 240
P RNG + TPQ P+PP PP
Sbjct: 384 PVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPP 420
Score = 48.9 bits (115), Expect = 7e-06
Identities = 62/212 (29%), Positives = 73/212 (34%), Gaps = 41/212 (19%)
Query: 13 PPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRA 72
PP V P+ R + P S+ +ASS PPP PP SR
Sbjct: 268 PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP---PPPSRPG------- 317
Query: 73 APAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQP 132
P LP P+ +G RL + P+ R GP PP
Sbjct: 318 -----PPPLP------PSSSGNDETPRLPQRNLSLSSSTPPLPSPGR----SGPLPPPPS 362
Query: 133 RSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAG--PPRGDPR 190
P R P + PL PPP SR G S PA + P +G PR PR
Sbjct: 363 ERPPPPVRDPPG--RSGPLPPPPPV-----SRNGSTSRALPATPQLPSRSGVDSPRSGPR 415
Query: 191 PRAPRPGDHPRRSPALRETPSLSPPSPGRRNG 222
P P P D P P PPS RNG
Sbjct: 416 P--PLPPDRPSAG-----APPPPPPSTSIRNG 440
Score = 43.5 bits (101), Expect = 3e-04
Identities = 42/126 (33%), Positives = 46/126 (36%), Gaps = 17/126 (13%)
Query: 124 PGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAG 183
P PS P +P PH R VP P +P PG P PFP T G
Sbjct: 186 PVPSTP-RPIQSSPHNRGSPPVPGG-PRQPSPGPTP----------PPFPGNRGTALGGG 233
Query: 184 PPRGDP----RPRAPRPGDHPRRSPALRETPSLSPPSPGRRNG-KRAAGKGTTPQPQPPP 238
R P P + RP P S AL + P PP G R R A PQ PP
Sbjct: 234 SIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPP 293
Query: 239 PPCATR 244
P R
Sbjct: 294 VPSTPR 299
Score = 39.7 bits (91), Expect = 0.004
Identities = 53/199 (26%), Positives = 68/199 (34%), Gaps = 30/199 (15%)
Query: 87 GAPARTGAL--AGS-RLRAAAAAAHDQEAAAPT-----GRRWRRRPGPSPPLQPRSRHPH 138
G P G L AG +LR+ A +D + P GR +P P R P
Sbjct: 95 GGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPS 154
Query: 139 TRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGD 198
+ PE R PP RP S P P P + P R P
Sbjct: 155 PGHRSGPPEPQRNRMPP-------PRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVP 207
Query: 199 HPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQP----------QPPPPPCATRREED 248
R P+ TP PP PG R A G G+ Q +PP PP +R +D
Sbjct: 208 GGPRQPSPGPTP---PPFPGNRG--TALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDD 262
Query: 249 MALRTRDRTSSRGTVFRAA 267
+R ++ R A
Sbjct: 263 KPPPPPPPVGNRPSIHREA 281
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 57.4 bits (137), Expect = 2e-08
Identities = 61/236 (25%), Positives = 93/236 (39%), Gaps = 21/236 (8%)
Query: 3 REKATEEAAAPPGVAESPARPRVNEQW--GSRAHPNPRSASSAAAAASSSFPPPGFIHPP 60
R+ EA + +PA P+ + S + P ASSA AS S G
Sbjct: 3672 RDLGRHEARPHSQPSSAPAMPKKGQPGYPSSAEYSQPSRASSAYHHASDS--KKGSRQAH 3729
Query: 61 SSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRW 120
S AA+ S+ A P A P+L R A P ++ + + ++ + AA+ Q G
Sbjct: 3730 SGPAALQSK--AEPQAQPQLQGRQAAPGPQQSQSPSSRQIPSGAASRQPQTQQQQQGL-- 3785
Query: 121 RRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPG 180
G PP Q ++ R + T P ++P K +PG P+ + P
Sbjct: 3786 ----GLQPPQQALTQ---ARLQQQSQPTTRGSAPAASQPAGKPQPG------PSTATGPQ 3832
Query: 181 EAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQP 236
AGPPR + + P++ A + P+ P G + G R G P QP
Sbjct: 3833 PAGPPRAEQTNGSKGTAKAPQQGRAPQAQPAPGPGPAGVKAGARPGGTPGAPAGQP 3888
Score = 44.3 bits (103), Expect = 2e-04
Identities = 79/333 (23%), Positives = 113/333 (33%), Gaps = 41/333 (12%)
Query: 3 REKATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSS 62
R+ T A + PG A++ A P V R P P + + A PP P S
Sbjct: 277 RQAETARATSVPGPAQAAAPPEVG-----RVSPQPPQPTKPSTAEPR---PPAGEAPAKS 328
Query: 63 RAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRR 122
AV + L A + G + L S L A+ Q A G+
Sbjct: 329 ATAVPAGLGATE--------QTQEGLTGKLFGLGASLLTQASTLMSVQPEADTQGQPAPS 380
Query: 123 RPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFP---ARSRTP 179
+ P S+ A P+ P PG P AK+ PG R P A +T
Sbjct: 381 KGTPKIVFNDASKE-------AGPKPLGSGPGPGPAPGAKTEPGARMGPGSGPGALPKTG 433
Query: 180 GEAGPPRGDPRPR-----APRPGDHPRR---SPALRETPSLSPPSPGRRNGKRAAGKGTT 231
G P G + A +P P+ P + ++ SP N
Sbjct: 434 GTTSPKHGRAEHQAASKAAAKPKTMPKERAICPLCQAELNVGSKSPANYNTCTTCRLQVC 493
Query: 232 PQPQPPPPPCATRREEDMALRTRDRTSSRGTVFRAADWGFGRSEQHLRGLTLIISCTLSH 291
P P + E + L + + G++ S+Q G S T
Sbjct: 494 NLCGFNPTPHLVEKTEWLCLNCQTKRLLEGSLGEPTPLPPPTSQQPPVGAPHRASGT--- 550
Query: 292 KPASLRRSGTQAWG-PRG-LPLRATPESFKGSP 322
+ L++ G Q G P G LP +A+P S K SP
Sbjct: 551 --SPLKQKGPQGLGQPSGPLPAKASPLSTKASP 581
Score = 42.7 bits (99), Expect = 5e-04
Identities = 70/269 (26%), Positives = 96/269 (35%), Gaps = 39/269 (14%)
Query: 8 EEAAAPPGVAESPARPR-VNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHP------- 59
+E P + SPA P +++ G P + ++ A A + P G++ P
Sbjct: 1348 KETQDPLKLHSSPASPSSASKEIGMPFSQGPGTPATTAVAPCPAGLPRGYMTPASPAGSE 1407
Query: 60 --PSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPT- 116
PS + HS + A L AP+ A AG R +A D E P
Sbjct: 1408 RSPSPSSTAHSYGHSPTTANYGSQTEDLPQAPSGLAA-AGRAAREKPLSASDGEGGTPQP 1466
Query: 117 GRRWRRRPGPSPPLQPRSRH------PHTRYPRAVPE---ATPLRPPPGTRPRAKSRPGC 167
R + SPPL P S P PRA E TP P PR+ P
Sbjct: 1467 SRAYSYFASSSPPLSPSSPSESPTFSPGKMGPRATAEFSTQTPSPAPASDMPRSPGAP-- 1524
Query: 168 RSSPFPAR-SRTPGEAGPPR---GDPRPRAP-----RPGDHPRRSPALRETPSLSP-PSP 217
SP A+ ++TP PR + AP D ++ + + S SP SP
Sbjct: 1525 TPSPMVAQGTQTPHRPSTPRLVWQESSQEAPFMVITLASDASSQTRMVHASASTSPLCSP 1584
Query: 218 GRRNGKRAAGKGTTP------QPQPPPPP 240
TTP P+PP PP
Sbjct: 1585 TETQPTTHGYSQTTPPSVSQLPPEPPGPP 1613
Score = 37.0 bits (84), Expect = 0.026
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 127 SPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCR--SSPFPARSRTPGEAGP 184
SP L P H + P P+ R P G +P ++ R S P PA++ P E G
Sbjct: 244 SPALSPA--HSPAKQPLGKPDQERSRGPGGPQPGSRQAETARATSVPGPAQAAAPPEVG- 300
Query: 185 PRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQ 235
R P+P P P E P+ S + AG G T Q Q
Sbjct: 301 -RVSPQPPQPTKPSTAEPRPPAGEAPAKSATAV-------PAGLGATEQTQ 343
Score = 36.6 bits (83), Expect = 0.035
Identities = 39/132 (29%), Positives = 49/132 (37%), Gaps = 22/132 (16%)
Query: 157 TRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPR------PRAPRPGDHPRRSPALRETP 210
T PR+KS+ S PA S A P G P P P+PG R++ R T
Sbjct: 232 TAPRSKSQQQLHS---PALSPAHSPAKQPLGKPDQERSRGPGGPQPGS--RQAETARAT- 285
Query: 211 SLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCATRREEDMALRTRDRTSSRGTVFRAADWG 270
S P P + G+ + PQP P A R + T A G
Sbjct: 286 --SVPGPAQAAAPPEVGRVSPQPPQPTKPSTAEPRPPAGEAPAKSAT--------AVPAG 335
Query: 271 FGRSEQHLRGLT 282
G +EQ GLT
Sbjct: 336 LGATEQTQEGLT 347
Score = 34.7 bits (78), Expect = 0.13
Identities = 47/215 (21%), Positives = 73/215 (33%), Gaps = 34/215 (15%)
Query: 7 TEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAV 66
+E + +P A S +GS+ P++ S AAA ++ P
Sbjct: 1406 SERSPSPSSTAHSYGHSPTTANYGSQTEDLPQAPSGLAAAGRAAREKPLSASDGEGGTPQ 1465
Query: 67 HSRLRA-APAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPG 125
SR + +++P L P + +P + G R A + A A R P
Sbjct: 1466 PSRAYSYFASSSPPLSPSSPSESPTFSPGKMGPRATAEFSTQTPSPAPASDMPRSPGAPT 1525
Query: 126 PSPPLQPRSRHPH------------------------------TRYPRAVPEATPLRPPP 155
PSP + ++ PH TR A +PL P
Sbjct: 1526 PSPMVAQGTQTPHRPSTPRLVWQESSQEAPFMVITLASDASSQTRMVHASASTSPLCSPT 1585
Query: 156 GTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPR 190
T+P + G + P+ S+ P E P G PR
Sbjct: 1586 ETQP---TTHGYSQTTPPSVSQLPPEPPGPPGFPR 1617
Score = 32.3 bits (72), Expect = 0.65
Identities = 38/164 (23%), Positives = 60/164 (36%), Gaps = 43/164 (26%)
Query: 124 PGPSPPLQPRSRHPHTRYPRAVPEATPLRP--------PPGTRPRAKSRPGCRSSPFPAR 175
P P PP P S+ P P +PL+ P G P S ++SP P++
Sbjct: 528 PTPLPP--PTSQQPPVGAPHRASGTSPLKQKGPQGLGQPSGPLPAKASPLSTKASPLPSK 585
Query: 176 -------------SRTPGEAG------PPRGDPRPRAPRPGDHPRRSPALRETPSLSPPS 216
S+TP P + +P P+ P P +P +P +
Sbjct: 586 ASPQAKPLRASEPSKTPSSVQEKKTRVPTKAEPMPKPP-----PETTP--------TPAT 632
Query: 217 PGRRNGKRAAGKGTTPQPQPPPPPCATRREEDMALRTRDRTSSR 260
P ++G R A + TP + P ED+ + + +SR
Sbjct: 633 PKVKSGVRRA-EPATPVVKAVPEAPKGGEAEDLVGKPYSQDASR 675
Score = 32.0 bits (71), Expect = 0.85
Identities = 26/83 (31%), Positives = 30/83 (36%), Gaps = 5/83 (6%)
Query: 166 GCRSSPFPARSRTPGEA---GPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNG 222
G P P PG GP G P P AP G + A R T P PG G
Sbjct: 10 GAGDGPLPPGGAGPGPGPGPGPGAGKP-PSAPAGGGQLPAAGAARSTAVPPVPGPGPGPG 68
Query: 223 KRAAGKGTTPQPQPPPPPCATRR 245
G G+T + P P +R
Sbjct: 69 P-GPGPGSTSRRLDPKEPLGNQR 90
Score = 31.6 bits (70), Expect = 1.1
Identities = 37/140 (26%), Positives = 45/140 (32%), Gaps = 20/140 (14%)
Query: 124 PGPS---PPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRS----------- 169
PGP PP P A A P P PG P PG S
Sbjct: 29 PGPGAGKPPSAPAGGGQLPAAGAARSTAVPPVPGPGPGPGPGPGPGSTSRRLDPKEPLGN 88
Query: 170 ----SPFP--ARSRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGK 223
SP P A + TPG P + A + D PRR+ + S SP +
Sbjct: 89 QRAASPTPKQASATTPGHESPRETRAQGPAGQEADGPRRTLQVDSRTQRSGRSPSVSPDR 148
Query: 224 RAAGKGTTPQPQPPPPPCAT 243
+ PQ P P +T
Sbjct: 149 GSTPTSPYSVPQIAPLPSST 168
Score = 31.6 bits (70), Expect = 1.1
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Query: 153 PPPGTRPRAKSRPGCRSSPF---PARSRTPGEAGPPRGDPRPRAPRPGDHPRRSP-ALRE 208
P P P A S P + PA ++ PG GP R + A R P +P A++E
Sbjct: 2262 PAPSRFPIASSVPPAEGPVYLGKPAAAKAPGAGGPSRPEMPVGAAREEPLPTTTPAAIKE 2321
Query: 209 TPSLSPPSP--GRRNGKRAA---GKGTTPQP 234
P+P G++ AA G G +P
Sbjct: 2322 AAGAPAPAPLAGQKPPADAAPGGGSGALSRP 2352
Score = 28.9 bits (63), Expect = 7.2
Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 99 RLRAAAAAAHDQEAAAPTGRRWRRRP-GPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGT 157
+L + A + A P G+ + R GP P QP SR T +VP PP
Sbjct: 241 QLHSPALSPAHSPAKQPLGKPDQERSRGPGGP-QPGSRQAETARATSVPGPAQAAAPPEV 299
Query: 158 RPRAKSRPGCRSSPFPARSRTPGEAGPPR 186
R +P + P A R P P +
Sbjct: 300 -GRVSPQPPQPTKPSTAEPRPPAGEAPAK 327
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 57.4 bits (137), Expect = 2e-08
Identities = 73/269 (27%), Positives = 103/269 (38%), Gaps = 59/269 (21%)
Query: 3 REKATEEAAAPPGVAESPARP---RVNEQWGSRAHPNPRSASSAAAAASSSFPPP----G 55
R + + A PP +P P R R P+PR S S PPP
Sbjct: 556 RRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTA 615
Query: 56 FIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAP 115
PP R RA+P+ P+ RV P + + ++ R+ + ++ ++ ++P
Sbjct: 616 SPPPPPKR-------RASPSPPPKR--RVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSP 666
Query: 116 TGRRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPAR 175
+ R R P QP RH + PRA ++ PP R A S P R SP P+
Sbjct: 667 S-RSTREARSP----QPNKRHSPSPRPRAPQTSSS---PPPVRRGASSSPQRRQSPSPST 718
Query: 176 ------SRTPG-----EAGPPR--------------GDPRPRAPRPGDHPRRSPALRETP 210
SRTP +A P G P P A +P P SP ++P
Sbjct: 719 RPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPP--SPVQSQSP 776
Query: 211 SL--SPPSPGRRNGKRAAGKGTTPQPQPP 237
S SP P ++ K TP P PP
Sbjct: 777 STNWSPAVPVKK------AKSPTPSPSPP 799
Score = 57.0 bits (136), Expect = 2e-08
Identities = 67/245 (27%), Positives = 85/245 (34%), Gaps = 20/245 (8%)
Query: 3 REKATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAA--------AASSSFPPP 54
R + + A PP SP + N SR +P S + S P P
Sbjct: 398 RHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKP 457
Query: 55 GFIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAA 114
+ S ++ AA + R R + + S +H +
Sbjct: 458 RKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKN--G 515
Query: 115 PTGRRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPA 174
GRR R P S PR R T PR +P PPP R R+ S +P P
Sbjct: 516 EVGRRRRHSPSRSASPSPRKRQKETS-PRGRRRRSP-SPPPTRRRRSPS-----PAPPPR 568
Query: 175 RSRTPGEAGPPRGDPRPRAPRPGDHPRR-SPALRETPSLSPPSPGRRNGKRAAGKGTTPQ 233
R RTP P R P P R PRR SP ++ S SPP P RR
Sbjct: 569 RRRTP-TPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP-PKRRTASPPPPPKRRAS 626
Query: 234 PQPPP 238
P PPP
Sbjct: 627 PSPPP 631
Score = 54.3 bits (129), Expect = 2e-07
Identities = 62/258 (24%), Positives = 87/258 (33%), Gaps = 31/258 (12%)
Query: 7 TEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAV 66
T+ + P + P + E P+ + A+S + P P I P +
Sbjct: 205 TKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEP--IPEPKEPSPE 262
Query: 67 HSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGP 126
+ + R R + + +RT + + S R + +P RRRP P
Sbjct: 263 KNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSP-----RRRPSP 317
Query: 127 SPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPR 186
PR R P R P P R + S G SS +RSR+P + P R
Sbjct: 318 RRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKR 377
Query: 187 GDPRPRAPR---PGDHPRRSPALRETPSLSPP---------------------SPGRRNG 222
PR R P P R P+ PP SPGR +G
Sbjct: 378 TSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSG 437
Query: 223 KRAAGKGTTPQPQPPPPP 240
K KGT + P P P
Sbjct: 438 KVTKHKGTEKRESPSPAP 455
Score = 53.5 bits (127), Expect = 3e-07
Identities = 72/287 (25%), Positives = 107/287 (37%), Gaps = 41/287 (14%)
Query: 36 NPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGAL 95
N +S+S + +++SS P H + R + +A+P R +P
Sbjct: 489 NQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPR----- 543
Query: 96 AGSRLRAAA---AAAHDQEAAAPTGRRWR------RRPGPSPPLQPRSRHPHTRYPRAVP 146
G R R+ + + AP RR R RR PSPP + RS P P
Sbjct: 544 -GRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQR 602
Query: 147 EATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRP----RAP------RP 196
+P PP P R+SP P R + PP+ P R+P R
Sbjct: 603 RYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRK 662
Query: 197 GDHPRRS--------PALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCATRREED 248
G P RS P R +PS P +P + +G + PQ P + R
Sbjct: 663 GSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTR--- 719
Query: 249 MALRTRDRTSSRGTVFRAADWGFGRSEQHLRGLTLIISCTLSHKPAS 295
+R RT + +AA S Q +R ++ S + S +PA+
Sbjct: 720 -PIRRVSRTPEPKKIKKAA----SPSPQSVRRVSSSRSVSGSPEPAA 761
Score = 48.1 bits (113), Expect = 1e-05
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 26/219 (11%)
Query: 5 KATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPP---PGFIHPPS 61
K + P SP + E+ + P RS S + + S P P H
Sbjct: 246 KVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSR 305
Query: 62 SRAAVHSRL---RAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGR 118
SR+ R R P+ R PR + P + + R R ++A+ +++ +
Sbjct: 306 SRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSS 365
Query: 119 RWRRRPGPSPPLQP--RSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARS 176
R R SPP +P R+ P + R P A+P R P A P R SP P +S
Sbjct: 366 RSR-----SPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS 420
Query: 177 -------------RTPGEAGPPRGDPRPRAPRPGDHPRR 202
RT G+ +G + +P P PR+
Sbjct: 421 NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRK 459
Score = 45.1 bits (105), Expect = 1e-04
Identities = 42/139 (30%), Positives = 54/139 (38%), Gaps = 28/139 (20%)
Query: 124 PGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAG 183
P P P +P+ P + + TRPR++SR RS RSR+P
Sbjct: 248 PKPEPIPEPKEPSPEKNSKKE-------KEKEKTRPRSRSRSKSRSR---TRSRSPSHTR 297
Query: 184 PPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCAT 243
P R R R+ PRR P+ R PS P RR TP + PPPP
Sbjct: 298 PRR---RHRSRSRSYSPRRRPSPRRRPS-----PRRR----------TPPRRMPPPPRHR 339
Query: 244 RREEDMALRTRDRTSSRGT 262
R + R R S G+
Sbjct: 340 RSRSPVRRRRRSSASLSGS 358
Score = 37.7 bits (86), Expect = 0.015
Identities = 43/160 (26%), Positives = 64/160 (40%), Gaps = 27/160 (16%)
Query: 160 RAKSR---PGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPR-RSPALRETPSLSPP 215
R KSR P RSSP R R + PR + R+P P + ++P L E PS+
Sbjct: 174 RRKSRSPSPRRRSSPV-RRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPE-PSVKVK 231
Query: 216 SPGRRNGKRAAGKGTTPQPQP-----PPPPCATRREEDMALRTRDRTSSRGTVFRAADWG 270
P + + P+P+P P P ++E +TR R+ SR ++
Sbjct: 232 EPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRS---KSRSRT 288
Query: 271 FGRSEQHLRGLTLIISCTLSHKPASLRRSGTQAWGPRGLP 310
RS H R P RS ++++ PR P
Sbjct: 289 RSRSPSHTR-------------PRRRHRSRSRSYSPRRRP 315
Score = 35.0 bits (79), Expect = 0.10
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 28/161 (17%)
Query: 5 KATEEAAAP-PGVAESPA-RPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSS 62
++T EA +P P SP+ RPR Q S P R ASS+ S P I S
Sbjct: 668 RSTREARSPQPNKRHSPSPRPRA-PQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVS- 725
Query: 63 RAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRR 122
R +++ A + +P+ + RV + + +++GS AA +
Sbjct: 726 RTPEPKKIKKAASPSPQSVRRV-----SSSRSVSGSPEPAA------------------K 762
Query: 123 RPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKS 163
+P P+PP +S+ P T + AVP P P P S
Sbjct: 763 KP-PAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNS 802
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 57.0 bits (136), Expect = 2e-08
Identities = 67/206 (32%), Positives = 77/206 (37%), Gaps = 27/206 (13%)
Query: 82 PRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPHTRY 141
PR LAG A A A + A ++ AA + WRR G P S P R
Sbjct: 7 PRRLAGLQRTPAAYANEAALAISGRADEEGAAGAGSKLWRRPRGAVSAGAPGS--PLYRV 64
Query: 142 PRAVPEATPLRPPPG-----TRPRAKSRPGCRSSPFPARSRT-----PGEAGPPRGDPRP 191
A P A P PPPG RPRA RPG SP P R G AG R
Sbjct: 65 -SAPPPAPPPPPPPGGPSRSERPRAGLRPGAFVSPGPLGRRASCSGRAGSAGRLRCSAAA 123
Query: 192 RAPRPGDHPRRS---PALR--ETPSLSPP--SPGRRNGKRAAGKG------TTPQPQPPP 238
+ P R+ PALR SPP SPG R G A G+ P PP
Sbjct: 124 LSAAQRGGPARAQVPPALRTFSPGPASPPRASPGGRPGSEARGRSGAECARRVPLHHGPP 183
Query: 239 PPCATRREEDMALRTRDRTSSRGTVF 264
E D + +T +RG F
Sbjct: 184 GASGVGSERDRKFQLH-QTPARGPPF 208
Score = 48.1 bits (113), Expect = 1e-05
Identities = 65/196 (33%), Positives = 76/196 (38%), Gaps = 33/196 (16%)
Query: 30 GSRAHPNPRSASSAAAAASS----SFPPPGFIHPPSSRAAVHS-RLRAAPAAAPRLLPRV 84
GS+ PR A SA A S S PPP PP S R RA + P
Sbjct: 41 GSKLWRRPRGAVSAGAPGSPLYRVSAPPPAPPPPPPPGGPSRSERPRAGLRPGAFVSPGP 100
Query: 85 LAGAPARTGALAGS--RLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPHTRYP 142
L G A AGS RLR +AAA + P R P L+ S P
Sbjct: 101 L-GRRASCSGRAGSAGRLRCSAAALSAAQRGGPA------RAQVPPALRTFSPGP----- 148
Query: 143 RAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPRR 202
A+P R PG RP +++R RS AR R P GPP A G R
Sbjct: 149 -----ASPPRASPGGRPGSEARG--RSGAECAR-RVPLHHGPPG------ASGVGSERDR 194
Query: 203 SPALRETPSLSPPSPG 218
L +TP+ PP PG
Sbjct: 195 KFQLHQTPARGPPFPG 210
Score = 35.0 bits (79), Expect = 0.10
Identities = 58/203 (28%), Positives = 71/203 (34%), Gaps = 41/203 (20%)
Query: 13 PPGVAESPARPRVNEQWGSRAHPNP--RSASSAAAAAS------SSFPPPGFIHPPSSRA 64
PPG RPR + G+ P P R AS + A S S+ +RA
Sbjct: 76 PPGGPSRSERPRAGLRPGAFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARA 135
Query: 65 AVHSRLRA---APAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWR 121
V LR PA+ PR P G+ AR +G+ H A+ G
Sbjct: 136 QVPPALRTFSPGPASPPRASPGGRPGSEAR--GRSGAECARRVPLHHGPPGASGVGSERD 193
Query: 122 RR------PGPSPPLQPRSRHPHTRYPRAVPEAT-PLRPPPGTRPRAKSRPGCRSSPFPA 174
R+ P PP S TR P + R PPG P
Sbjct: 194 RKFQLHQTPARGPPFPGIS--GMTRGPVVLSGVNRQHRWPPGASP--------------- 236
Query: 175 RSRTPGEAG---PPRGDPRPRAP 194
SR+ GEAG P R RPRAP
Sbjct: 237 -SRSLGEAGGERPARALRRPRAP 258
>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 57.0 bits (136), Expect = 2e-08
Identities = 67/206 (32%), Positives = 77/206 (37%), Gaps = 27/206 (13%)
Query: 82 PRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPHTRY 141
PR LAG A A A + A ++ AA + WRR G P S P R
Sbjct: 7 PRRLAGLQRTPAAYANEAALAISGRADEEGAAGAGSKLWRRPRGAVSAGAPGS--PLYRV 64
Query: 142 PRAVPEATPLRPPPG-----TRPRAKSRPGCRSSPFPARSRT-----PGEAGPPRGDPRP 191
A P A P PPPG RPRA RPG SP P R G AG R
Sbjct: 65 -SAPPPAPPPPPPPGGPSRSERPRAGLRPGAFVSPGPLGRRASCSGRAGSAGRLRCSAAA 123
Query: 192 RAPRPGDHPRRS---PALR--ETPSLSPP--SPGRRNGKRAAGKG------TTPQPQPPP 238
+ P R+ PALR SPP SPG R G A G+ P PP
Sbjct: 124 LSAAQRGGPARAQVPPALRTFSPGPASPPRASPGGRPGSEARGRSGAECARRVPLHHGPP 183
Query: 239 PPCATRREEDMALRTRDRTSSRGTVF 264
E D + +T +RG F
Sbjct: 184 GASGVGSERDRKFQLH-QTPARGPPF 208
Score = 48.1 bits (113), Expect = 1e-05
Identities = 65/196 (33%), Positives = 76/196 (38%), Gaps = 33/196 (16%)
Query: 30 GSRAHPNPRSASSAAAAASS----SFPPPGFIHPPSSRAAVHS-RLRAAPAAAPRLLPRV 84
GS+ PR A SA A S S PPP PP S R RA + P
Sbjct: 41 GSKLWRRPRGAVSAGAPGSPLYRVSAPPPAPPPPPPPGGPSRSERPRAGLRPGAFVSPGP 100
Query: 85 LAGAPARTGALAGS--RLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPHTRYP 142
L G A AGS RLR +AAA + P R P L+ S P
Sbjct: 101 L-GRRASCSGRAGSAGRLRCSAAALSAAQRGGPA------RAQVPPALRTFSPGP----- 148
Query: 143 RAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPRR 202
A+P R PG RP +++R RS AR R P GPP A G R
Sbjct: 149 -----ASPPRASPGGRPGSEARG--RSGAECAR-RVPLHHGPPG------ASGVGSERDR 194
Query: 203 SPALRETPSLSPPSPG 218
L +TP+ PP PG
Sbjct: 195 KFQLHQTPARGPPFPG 210
Score = 35.0 bits (79), Expect = 0.10
Identities = 58/203 (28%), Positives = 71/203 (34%), Gaps = 41/203 (20%)
Query: 13 PPGVAESPARPRVNEQWGSRAHPNP--RSASSAAAAAS------SSFPPPGFIHPPSSRA 64
PPG RPR + G+ P P R AS + A S S+ +RA
Sbjct: 76 PPGGPSRSERPRAGLRPGAFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARA 135
Query: 65 AVHSRLRA---APAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWR 121
V LR PA+ PR P G+ AR +G+ H A+ G
Sbjct: 136 QVPPALRTFSPGPASPPRASPGGRPGSEAR--GRSGAECARRVPLHHGPPGASGVGSERD 193
Query: 122 RR------PGPSPPLQPRSRHPHTRYPRAVPEAT-PLRPPPGTRPRAKSRPGCRSSPFPA 174
R+ P PP S TR P + R PPG P
Sbjct: 194 RKFQLHQTPARGPPFPGIS--GMTRGPVVLSGVNRQHRWPPGASP--------------- 236
Query: 175 RSRTPGEAG---PPRGDPRPRAP 194
SR+ GEAG P R RPRAP
Sbjct: 237 -SRSLGEAGGERPARALRRPRAP 258
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 56.6 bits (135), Expect = 3e-08
Identities = 63/242 (26%), Positives = 85/242 (35%), Gaps = 33/242 (13%)
Query: 12 APPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLR 71
AP A +P P+ G A P+P+ A + AA S P G PP A
Sbjct: 1217 APTTPAATPPSPK-----GGLATPSPKGAPTTPAATPPS-PKGGPATPPPKGAPT----- 1265
Query: 72 AAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQ 131
PAA P L LA P + G+ A + A + + P + P
Sbjct: 1266 -PPAATPPSLKGGLATPPHK-----GAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPS 1319
Query: 132 PRSRHPHTRYPRAVPEATPLRPP--------PGTRPRAKSRPGCRSS---PFPARSRTPG 180
P+ P T P+ P + PP P T P +K P SS P P +
Sbjct: 1320 PKGS-PGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSH 1378
Query: 181 EAGPPRGDPRPRA----PRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQP 236
+ GP P P+ P P P + +P +P +P R G KG P
Sbjct: 1379 KGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAV 1438
Query: 237 PP 238
P
Sbjct: 1439 TP 1440
Score = 56.2 bits (134), Expect = 4e-08
Identities = 73/252 (28%), Positives = 97/252 (38%), Gaps = 44/252 (17%)
Query: 12 APPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLR 71
AP A +P P+ G A P P+ A + AA S P G + PS + A
Sbjct: 1148 APTTPAATPPSPK-----GGLATPPPKGAPTTPAATPPS--PKGGLATPSPKGA-----P 1195
Query: 72 AAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQ 131
PAA P P+ P+ GA AA + A P+ + P +PP
Sbjct: 1196 TTPAATPP-SPKGGLATPSPKGA---PTTPAATPPSPKGGLATPSPKGAPTTPAATPP-S 1250
Query: 132 PRSRHPHTRYPRAVPEATPLRPPPGTRPRAK---SRPGCRSSPFPARSRTPGEAG----- 183
P+ P T P+ P PP T P K + P + +P PA P G
Sbjct: 1251 PKG-GPATPPPKGAP-----TPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATS 1304
Query: 184 PPRGDPRPRAPRPGDHPRRSP------ALRETPSLSPPSPG-----RRNGKRAAGKGTTP 232
PP+G P P A P P+ SP P+++PPSP + G TTP
Sbjct: 1305 PPKGAPTPPAATP-PSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTP 1363
Query: 233 -QPQPPPPPCAT 243
+ P PP AT
Sbjct: 1364 SSKEGPTPPAAT 1375
Score = 54.3 bits (129), Expect = 2e-07
Identities = 65/246 (26%), Positives = 84/246 (34%), Gaps = 24/246 (9%)
Query: 12 APPGVA----ESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVH 67
+P GV E+P VN + P + A + +SS P P
Sbjct: 874 SPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPAS 933
Query: 68 SRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPS 127
+ AP P P G PA AA + A P+ + P +
Sbjct: 934 PSPKGAPTP-PAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAAT 992
Query: 128 PPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRG 187
PP P+ P T P+ P PP T P K P ++PFP + TP A PP
Sbjct: 993 PP-SPKGG-PATPSPKGAPT-----PPAVTPPSPKGSPA--ATPFPKGASTPPAATPPSP 1043
Query: 188 DPRPRA-PRPGDHPRRSPALRETPSLSP--------PSPGRRNGKRAAGKGTTPQPQ-PP 237
P A P P P A +P P P+P G TP P+ P
Sbjct: 1044 KGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAP 1103
Query: 238 PPPCAT 243
PP AT
Sbjct: 1104 MPPAAT 1109
Score = 53.9 bits (128), Expect = 2e-07
Identities = 58/243 (23%), Positives = 83/243 (34%), Gaps = 12/243 (4%)
Query: 6 ATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAA 65
AT + PP +P P + P + + + FP G P +A
Sbjct: 851 ATTHSPTPPSPKGAPT-PSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAP 909
Query: 66 VHSRLRAAPAAAPRL-LPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRP 124
S ++P A P+ + +P+ GA AA + A +W P
Sbjct: 910 ALSMTSSSPKKARATPAPKGIPASPSPKGAPTPP----AATPPSPKGGPATPSPKWAPTP 965
Query: 125 GPSPPLQPRSRHPHTRYPRAVPEATPLRPP-PGTRPRAKSRPGCRSSPF---PARSRTPG 180
+ P P+ P T P+ P PP P P S G + P P+ +P
Sbjct: 966 PAATPPSPKGG-PATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPA 1024
Query: 181 EAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPP 240
P+G P A P P+ SPA P +P +P G T P PP
Sbjct: 1025 ATPFPKGASTPPAATPPS-PKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPP 1083
Query: 241 CAT 243
AT
Sbjct: 1084 AAT 1086
Score = 52.8 bits (125), Expect = 5e-07
Identities = 74/279 (26%), Positives = 99/279 (35%), Gaps = 64/279 (22%)
Query: 9 EAAAPPGVAESPARPRVNEQWGSRAHPNP-RSASSAAAAASSSFPPPG---FIHPPSSRA 64
++ +P GV+ SP R + GS P + SS + +SF P F S A
Sbjct: 792 DSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPA 851
Query: 65 AVHSRLRAAPAAAPR------LLPRVLAGAPART-------------------------- 92
HS +P AP L P+ + P T
Sbjct: 852 TTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPAL 911
Query: 93 GALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLR 152
+ S +A A A A+P+ + P +PP P+ P T P+ P
Sbjct: 912 SMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPP-SPKGG-PATPSPKWAPT----- 964
Query: 153 PPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSL 212
PP T P K P ++P P + TP A PP P P P P P++
Sbjct: 965 PPAATPPSPKGGP---ATPSPKGAPTPPAATPPSPKGGPATPSPKGAP-------TPPAV 1014
Query: 213 SPPSPGRRNGKRAA-----GKGTTPQPQPPPP---PCAT 243
+PPSP G AA G T P PP P P AT
Sbjct: 1015 TPPSP---KGSPAATPFPKGASTPPAATPPSPKGSPAAT 1050
Score = 52.4 bits (124), Expect = 6e-07
Identities = 62/248 (25%), Positives = 84/248 (33%), Gaps = 24/248 (9%)
Query: 8 EEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVH 67
+E A P ++PA + +A P A+ + P P PPS +
Sbjct: 897 KEGPATPAPKQAPALSMTSSS-PKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPA 955
Query: 68 SRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPS 127
+ P P G PA AA + A P+ + P +
Sbjct: 956 TPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVT 1015
Query: 128 PPLQPRSRHPHTRYPRAV---PEATPLRPP--PGTRPRAKSRPGCRSSPFPARSRTPGEA 182
PP P+ T +P+ P ATP P P P K P ++ P S G A
Sbjct: 1016 PP-SPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLP--SPKGGPA 1072
Query: 183 GPP-RGDPRPRAPRPGDHPRRSPALRET------PSLSPPSPGRRNGKRAAGKGTTPQPQ 235
P +G P P A P P+ PA P+ +PPSP G T P
Sbjct: 1073 TPSLKGAPTPPAATPPS-PKGGPATPSPKGAPMPPAATPPSP-------KGGLATPPHKG 1124
Query: 236 PPPPPCAT 243
P P AT
Sbjct: 1125 APTTPAAT 1132
Score = 49.7 bits (117), Expect = 4e-06
Identities = 61/242 (25%), Positives = 79/242 (32%), Gaps = 34/242 (14%)
Query: 7 TEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAV 66
T AA P PA P + A P A + P P PPS + +
Sbjct: 1058 TTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGL 1117
Query: 67 ----HSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRR 122
H PAA P P+ G LA + A A P+ +
Sbjct: 1118 ATPPHKGAPTTPAATP----------PSPKGGLATPPPKGAPTT---PAATPPSPKGGLA 1164
Query: 123 RPGP-SPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGE 181
P P P P + P + A P P P S G ++P P + T
Sbjct: 1165 TPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATP--PSPKGGLATPSPKGAPTTPA 1222
Query: 182 AGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPC 241
A P P P+ P+ +P TP+ +PPSP G T P P PP
Sbjct: 1223 ATP----PSPKGGLATPSPKGAPT---TPAATPPSP-------KGGPATPPPKGAPTPPA 1268
Query: 242 AT 243
AT
Sbjct: 1269 AT 1270
Score = 48.9 bits (115), Expect = 7e-06
Identities = 62/247 (25%), Positives = 86/247 (34%), Gaps = 33/247 (13%)
Query: 7 TEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSR-AA 65
T A P + ++PA S P + SS + PP PP+ + A
Sbjct: 1434 TPPAVTPVSLKKAPAT--------SAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVA 1485
Query: 66 VHSRLRAAPAAAPRL----LPRVLAGAPARTGALAGSRLRAAAAAAH-----------DQ 110
S + APA + LP V+ +P A SR A A +
Sbjct: 1486 TSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPK 1545
Query: 111 EAAAP---TGRRWRRRPG-PSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPG 166
EA P T ++ P P+P P + P ++ + P TP P+ P
Sbjct: 1546 EALIPPAMTVPSPKKTPAIPTPKEAPAT--PSSKEASSPPAVTPSTYKGAPSPKELLIPP 1603
Query: 167 CRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAA 226
+SP P + TP PP + P P P P P + SP SP K A
Sbjct: 1604 AVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGA 1663
Query: 227 GKGTTPQ 233
T PQ
Sbjct: 1664 ---TVPQ 1667
Score = 47.4 bits (111), Expect = 2e-05
Identities = 60/256 (23%), Positives = 82/256 (32%), Gaps = 23/256 (8%)
Query: 7 TEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSR--- 63
T AA PP PA P A P A P P + PPS +
Sbjct: 1242 TTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGP 1301
Query: 64 AAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQ-EAAAPTGRRWRR 122
A + P AA P+ G P GA + + A P+ +
Sbjct: 1302 ATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPT 1361
Query: 123 RP----GPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRT 178
P GP+PP S P+ P P P P + + PA T
Sbjct: 1362 TPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVT 1421
Query: 179 -PGEAGPPRGDPRPRAPRP--------GDHPRRSPALRET------PSLSPPSPGRRNGK 223
G A P +GD P A P P+ PA + P+++PPSP
Sbjct: 1422 REGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAP 1481
Query: 224 RAAGKGTTPQPQPPPP 239
+ ++P+ P P
Sbjct: 1482 KQVATSSSPKKAPATP 1497
Score = 35.8 bits (81), Expect = 0.059
Identities = 55/248 (22%), Positives = 89/248 (35%), Gaps = 34/248 (13%)
Query: 3 REKATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSS 62
+E T A PP + PA P P+ ++ SS P+S
Sbjct: 1611 KEAPTPPAVTPPSPEKGPATPA------------PKGTPTSPPVTPSSLK-----DSPTS 1653
Query: 63 RAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPT--GRRW 120
A+V ++ A +P+ G PA+ G A + A A APT G +
Sbjct: 1654 PASVTCKMGAT-------VPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQT 1706
Query: 121 RRRPGPSPPLQP-RSRHPHTRYPRAVPEATPLRP-PPGTRPRAKSRPGCRS-----SPFP 173
++ SPP+ P S ++ P + PL P + AK + S +P
Sbjct: 1707 KKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPE 1766
Query: 174 ARSRTPGEAGP-PRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTP 232
+++ TP A + P+P + P +L PS P P ++ ++
Sbjct: 1767 SKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLE 1826
Query: 233 QPQPPPPP 240
P P P
Sbjct: 1827 SPSKPLAP 1834
Score = 33.9 bits (76), Expect = 0.22
Identities = 47/171 (27%), Positives = 59/171 (34%), Gaps = 30/171 (17%)
Query: 35 PNPRSASSAAAAASSSFPPPGFIHP-------PSSRAAVHSRLRAAPAAAPRLLPRVLAG 87
P P+ +AA +S FP P I P S + L AP AP LP L G
Sbjct: 51 PAPQQCPLSAANQASPFPSPSTIASTPLEVPFPQSSSGTALPLGTAP-EAPTFLPN-LIG 108
Query: 88 APARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPHTRYPRAVPE 147
P ALA + APT + P S PL + PH+ +
Sbjct: 109 PPISPAALALA-----------SPMIAPT---LKGTPSSSAPLALVALAPHSVQKSSAFP 154
Query: 148 ATPLRPPPGTRPRAK------SRPGCRSSPFPARSRTPGEAGP-PRGDPRP 191
L PP S P S P ++ P E P P+G P P
Sbjct: 155 PNLLTSPPSVAVAESGSVITLSAPIAPSEPKTNLNKVPSEVVPNPKGTPSP 205
>gi|238908524 hypothetical protein LOC389333 [Homo sapiens]
Length = 1015
Score = 55.8 bits (133), Expect = 5e-08
Identities = 81/281 (28%), Positives = 100/281 (35%), Gaps = 55/281 (19%)
Query: 2 CREKATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPS 61
C E A EE AAP ARPR + P P+S AA A P P +
Sbjct: 188 CVEVALEEGAAP-------ARPRTVPKRQIELRPRPQSPPRAAGA-----PRPRLLLRTG 235
Query: 62 SRAAVHSRLRAAPAAAPRLLPRVLA-GAPARTGALAGS------RLRAAAAAAH------ 108
S L+AA L R L+ APA + A GS R A + H
Sbjct: 236 SLDESLGPLQAAAGFVQTALARKLSPEAPAPSSATFGSTGRSEPETRETARSTHVVLEKA 295
Query: 109 --------DQEAAAPTGRRWR-------RRPGPSP---PLQPRSRHPHTRYPRAVPEAT- 149
D A A R W RR P+P PL P S + + EA
Sbjct: 296 KSRPLRVRDNSAPAKAPRPWPSLRERAIRRDKPAPGTEPLGPVSSSIFLQSEEKIQEARK 355
Query: 150 ---PLRPPPGTRPRAKSRP-GCR-SSPFPARSRTPGEAGPPRGDPR-----PRAPRPGD- 198
P P T RA+S P CR S P+R+ P PPR P PR P P +
Sbjct: 356 TRFPREAPDRTVQRARSPPFECRIPSEVPSRAVRPRSPSPPRQTPNGAVRGPRCPSPQNL 415
Query: 199 HPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPP 239
P R + L P + + A + T + P PP
Sbjct: 416 SPWDRTTRRVSSPLFPEASSEWENQNPAVEETVSRRSPSPP 456
Score = 35.0 bits (79), Expect = 0.10
Identities = 55/206 (26%), Positives = 71/206 (34%), Gaps = 30/206 (14%)
Query: 63 RAAVHSRLRA-APAAAPRLLP--RVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRR 119
R V SR+RA P R + R++ RT L G+R + + +P
Sbjct: 744 RPEVTSRVRARGPGGENRDVEAQRLVPDGDGRTSPLGGARSSSQRSPVGPAGVRSPRPGS 803
Query: 120 WRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPP--------GTRPRAKSRP---GCR 168
+ + PSP + P+ + P T A PL P +PRA S P
Sbjct: 804 PQMQASPSPGIAPKPKTPPTAPEPAAAVQAPLPREPLALAGRTAPAQPRAASAPPTDRSP 863
Query: 169 SSPFPARSRTPGEA--GPPRGDPRPRAPRPGDHPRRSPALRE-------------TPSLS 213
SP R PG A G DP + PR+ P LR P S
Sbjct: 864 QSPSQGARRQPGAAPLGKVLVDPESGRYYFVEAPRQ-PRLRVLFDPESGQYVEVLLPPSS 922
Query: 214 PPSPGRRNGKRAAGKGTTPQPQPPPP 239
P P R A G G P P P
Sbjct: 923 PGPPHRVYTPLALGLGLYPPAYGPIP 948
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 55.5 bits (132), Expect = 7e-08
Identities = 75/297 (25%), Positives = 105/297 (35%), Gaps = 47/297 (15%)
Query: 6 ATEEAAAPPGVA----ESPARPRVNEQWGSRAHPNPRSASSAAA---AASSSFPPPGFIH 58
AT APP +A ++P P + A P+P++ ++ A A S PP +
Sbjct: 615 ATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQ 674
Query: 59 PPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGR 118
P S A S + A P P LA P + + + +A +A P
Sbjct: 675 APFSPPA--SPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAA 732
Query: 119 RWRRRPGPSPPLQPRSRHPHTRYPRAVP-----------------EATPLRPPPGTRPRA 161
+ P PSPP P T PR P +PL PP P A
Sbjct: 733 PPLQVP-PSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPA 791
Query: 162 KSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRN 221
+ P ++ P P S PG+A P +P P+ P L PPSP
Sbjct: 792 LATPPLQALPSPPAS-FPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASP 850
Query: 222 GKRAAGKGTTPQPQ---------------PPPP----PCATRREEDMALRTRDRTSS 259
+A + TP P PPPP P +T D+A + TS+
Sbjct: 851 TLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATST 907
Score = 54.7 bits (130), Expect = 1e-07
Identities = 67/253 (26%), Positives = 83/253 (32%), Gaps = 41/253 (16%)
Query: 30 GSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAP 89
G RSA SA A +S P PG PS A SR PR P P
Sbjct: 145 GKATEAPKRSALSAGARRDTSGPTPG---TPSPAMARRSRAAGTEVGLPRPAPSARPRPP 201
Query: 90 ARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRR------------------------RPG 125
G R ++A+ H +P RR R G
Sbjct: 202 TE-----GPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSG 256
Query: 126 PSPPLQPRS-RHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGC---RSSPFPARSRTPGE 181
PS PR+ HP P+ + LRPP T PR + P SSP S + +
Sbjct: 257 PSARGTPRAPAHPSQPKPKGLQA---LRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTK 313
Query: 182 AGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAA-GKGTTPQPQPPPPP 240
A P P P P P P L+PPSP + TP Q PP
Sbjct: 314 ARPVPPPDNAATPLPATLPPSPPLATPLP-LAPPSPSAPPSLQTLPSPPATPPSQAPPSM 372
Query: 241 CATRREEDMALRT 253
+ +L+T
Sbjct: 373 TTPPMQAPPSLQT 385
Score = 50.1 bits (118), Expect = 3e-06
Identities = 64/251 (25%), Positives = 84/251 (33%), Gaps = 66/251 (26%)
Query: 6 ATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAA 65
AT APP +A P + + A P P++ PP PP
Sbjct: 588 ATPPPQAPPALASPPLQGLPSPPLSPLATPPPQA-------------PPXLALPPLQAPP 634
Query: 66 VHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPG 125
+P A+P L P + +P ALA L+A + P
Sbjct: 635 -------SPPASPPLSP-LATPSPQAPNALAVHLLQAPFS------------------PP 668
Query: 126 PSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARS--RTPGEAG 183
PSPP+Q P + P A P +P PP P + + P + P P S +P
Sbjct: 669 PSPPVQA----PFS--PPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP 722
Query: 184 PPRGDP----------------RPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAG 227
PP+ P P +P PR P L P PPSP
Sbjct: 723 PPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLA 782
Query: 228 KGTTPQPQPPP 238
K P PQ PP
Sbjct: 783 K---PPPQAPP 790
Score = 48.1 bits (113), Expect = 1e-05
Identities = 72/272 (26%), Positives = 96/272 (35%), Gaps = 66/272 (24%)
Query: 40 ASSAAAAASSSFPPPGFI--HPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPA------- 90
A + AAA + + PG + PP S R P P L RVL A A
Sbjct: 8 AKAGAAARTPAARAPGLLTPRPPGSP-------RPPPPVTPAAL-RVLGAAGAVGRKPLA 59
Query: 91 -RTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRS-RHPHTRYPRAVPEA 148
R G + G+ + +A A +A + R P PP R R P + P +
Sbjct: 60 ERAGGIGGATIPESAPRAGPTRSAGTSSRN----PASRPPASGRGERAPPAKNTSPGPVS 115
Query: 149 TPLRPPPGTRPRAKSRPGCRSS----------------------------------PFPA 174
+P R TRP + G R S P PA
Sbjct: 116 SPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPA 175
Query: 175 ---RSRTPG-EAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGT 230
RSR G E G PR P R P + PR+S + S + PSP R + +AG G
Sbjct: 176 MARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARR-RPSAGGGL 234
Query: 231 TPQPQPPPPPCATRREEDMALRTRDRTSSRGT 262
Q P + ++ R S+RGT
Sbjct: 235 ----QRPASRSLSSSATPLSSPARSGPSARGT 262
Score = 39.7 bits (91), Expect = 0.004
Identities = 64/279 (22%), Positives = 84/279 (30%), Gaps = 75/279 (26%)
Query: 11 AAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRL 70
AAPP + P P + A P P++ + A + P P P + + + L
Sbjct: 762 AAPP--LQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASL 819
Query: 71 RAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPL 130
+P A P P LA L+ + A+PT + RR P P P
Sbjct: 820 PMSPLATP---------PPQAPPVLAAPLLQVPPSPP-----ASPTLQAPRRPPTPGPDT 865
Query: 131 QPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPG---------CRSSPFPARSRTPGE 181
PR P PPP +R + + G S+P R G
Sbjct: 866 SVSG-------PRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGP 918
Query: 182 AGPPRGDPRPRAPRPGDHPR---RSPA------------LRETPSLSP------------ 214
G P P A HP R PA L P+ P
Sbjct: 919 EGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYET 978
Query: 215 ----------------PSPGRRNGKRAAGKGTTPQPQPP 237
PSPG GK AAG G + P
Sbjct: 979 EGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSP 1017
Score = 35.8 bits (81), Expect = 0.059
Identities = 62/239 (25%), Positives = 83/239 (34%), Gaps = 36/239 (15%)
Query: 20 PARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAAA-- 77
P P + A P +++ S A + SS P IHP + +++ S AP ++
Sbjct: 452 PDSPPLQAPLSLPASPPLQTSLSPAVSPLSS---PLTIHPLQALSSLASHSPQAPLSSLI 508
Query: 78 -------PRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSP-P 129
L P L PA L + A +A T P P+P P
Sbjct: 509 MPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCP 568
Query: 130 LQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGP---PR 186
LQ A P +PL PP P + + P ++ P A G P P
Sbjct: 569 LQ------------APP--SPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPL 614
Query: 187 GDPRPRAP-----RPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPP 240
P P+AP P P PA L+ PSP N A P PP PP
Sbjct: 615 ATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNA-LAVHLLQAPFSPPPSPP 672
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 54.7 bits (130), Expect = 1e-07
Identities = 61/245 (24%), Positives = 87/245 (35%), Gaps = 32/245 (13%)
Query: 7 TEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAV 66
+E+ A GV + P + +Q G A P A AA + P P + P
Sbjct: 3207 SEQPRAADGVVKVPPASKAPQQPGKEAAKTPD-----AKAAPTPTPAPVPVPVPLP---- 3257
Query: 67 HSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRR-RPG 125
APA AP R+L P+ L G L H + +G ++ R G
Sbjct: 3258 ------APAPAPHGEARILTVTPSNQ--LQGLPLTPPVVVTHGVQIVHSSGELFQEYRYG 3309
Query: 126 PSPPLQPRSRHPHTRYPRAVPEATPLR-------PPPGTRPRAKSRPGCRSSPF-PARSR 177
P ++ HT++P A P R PPP P +P + P PA
Sbjct: 3310 DIRTYHPPAQLTHTQFPAASSVGLPSRTKTAAQGPPPEGEPLQPPQPVQSTQPAQPAPPC 3369
Query: 178 TPGEAGPPRGDPRPRAPRPGDHPR------RSPALRETPSLSPPSPGRRNGKRAAGKGTT 231
P + G P P + P+ + P L P+ PP P + + A G T
Sbjct: 3370 PPSQLGQPGQPPSSKMPQVSQEAKGTQTGVEQPRLPAGPANRPPEPHTQVQRAQAETGPT 3429
Query: 232 PQPQP 236
P P
Sbjct: 3430 SFPSP 3434
Score = 33.1 bits (74), Expect = 0.38
Identities = 64/277 (23%), Positives = 95/277 (34%), Gaps = 50/277 (18%)
Query: 6 ATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAA 65
A +A AP G+A P ++ +A +A+ + S P F PP
Sbjct: 2188 AAYKADAPEGLA-----PEDRDKPAHQASETELAAAIGSIINDISGEPENFPAPPPYPGE 2242
Query: 66 VHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPG 125
+ L+ AGA A + G A + + EAA + R P
Sbjct: 2243 SQTDLQPP------------AGAQALQPSEEGMETDEAVSGILETEAATESSRPPVNAPD 2290
Query: 126 PS--PPLQPRSRHPHTRYPRAVPEA--------TPLRPPPGTRPRAKSRPGCRSSP---F 172
PS P +R + +VPEA T +R G + +SR ++
Sbjct: 2291 PSAGPTDTKEARGNSSETSHSVPEAKGSKEVEVTLVRKDKGRQKTTRSRRKRNTNKKVVA 2350
Query: 173 PARSRTPGEAGPPRGDP----------RPRAP---RPGDHPRRSPA------LRETPSLS 213
P S P E+ +G+ P AP + + P +P L + PS
Sbjct: 2351 PVESHVP-ESNQAQGESPAANEGTTVQHPEAPQEEKQSEKPHSTPPQSCTSDLSKIPSTE 2409
Query: 214 PPSPGRRNGKRAAGKGTTPQPQPPPPPCATRREEDMA 250
S +R K + P PPPP A EE A
Sbjct: 2410 NSSQEISVEERTPTKASVPPDLPPPPQPAPVDEEPQA 2446
Score = 29.3 bits (64), Expect = 5.5
Identities = 51/235 (21%), Positives = 80/235 (34%), Gaps = 21/235 (8%)
Query: 4 EKATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSR 63
E+ +EAAA P PR +R + + A A + PP G+ P S +
Sbjct: 1935 ERELQEAAAVP------TTPRRGRPPKTRRRADEEEENEAKEPAETLKPPEGWRSPRSQK 1988
Query: 64 AAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRR 123
A + + A G G + + A ++EA + +R R+
Sbjct: 1989 TAAGGGPQGKKGKNEPKVDATRPEATTEVGPQIGVKESSMEPKAAEEEAGSEQ-KRDRKD 2047
Query: 124 PGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAG 183
G ++P P V E P R +SR + A + A
Sbjct: 2048 AG-------TDKNPPETAPVEVVEKKPAPEKNSKSKRGRSRNSRLAVDKSASLKNVDAAV 2100
Query: 184 PPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPP 238
PRG A + G+ R S + +P S SP + +G + K P P
Sbjct: 2101 SPRG----AAAQAGE--RESGVVAVSPEKS-ESPQKEDGLSSQLKSDPVDPDKEP 2148
Score = 29.3 bits (64), Expect = 5.5
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 17/173 (9%)
Query: 74 PAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPR 133
P A P LP + P+ A + AAA D + P+G PGPS PR
Sbjct: 2987 PPALPSKLPTEVNHVPSGPSIPADRTVSHLAAAKLDAHSPRPSG------PGPSS--FPR 3038
Query: 134 SRHPHTRYPRAV-PEATPLRPPPGTRPRAKSRPGCRSS---PFPARSRTPGEAGPPRGDP 189
+ HP + A+ AT + P+ S S P + ++T + +G+
Sbjct: 3039 ASHPSSTASTALSTNATVMLAAGIPVPQFISSIHPEQSVIMPPHSITQTVSLSHLSQGEV 3098
Query: 190 RPRAPRPGDHPRRSPALRETPSLSPPSP--GRRNGKRAAGKGTTPQPQPPPPP 240
R P P + ++R SP +P ++ RA + +TPQP P P
Sbjct: 3099 RMNTP---TLPSITYSIRPEALHSPRAPLQPQQIEVRAPQRASTPQPAPAGVP 3148
Score = 28.5 bits (62), Expect = 9.4
Identities = 38/134 (28%), Positives = 49/134 (36%), Gaps = 21/134 (15%)
Query: 124 PGPSPPLQPRSRHPHTRYPRAV--------PEATPLRPPPGTRPRAKSRPGCRSSPFPAR 175
P PS PL R+R + R A P P+ P TR R + R ++ P
Sbjct: 1890 PEPSLPLS-RTRRRNVRSVYATMGDHENRSPVKEPVEQPRVTRKRLE-RELQEAAAVPTT 1947
Query: 176 SRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGR--RNGKRAAGKGTTPQ 233
P RG P P+ R D + A +L PP R R+ K AAG G +
Sbjct: 1948 --------PRRGRP-PKTRRRADEEEENEAKEPAETLKPPEGWRSPRSQKTAAGGGPQGK 1998
Query: 234 PQPPPPPCATRREE 247
P R E
Sbjct: 1999 KGKNEPKVDATRPE 2012
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 54.3 bits (129), Expect = 2e-07
Identities = 65/255 (25%), Positives = 86/255 (33%), Gaps = 36/255 (14%)
Query: 13 PPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRA 72
P GV P P GS + + + S+ PPP IH V
Sbjct: 705 PNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPP 764
Query: 73 APAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQP 132
P P LP P T S A +AA PT P+PP+ P
Sbjct: 765 PPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVT---QAAPPT---------PTPPVPP 812
Query: 133 RSRHPH--TRYPRAVPEATPLRPPPGTRPRAKS----RPGCRSSPFPA-----RSRTPGE 181
+ P Y P P+ PP T P+ +S P SP P+ S+ P
Sbjct: 813 AKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFPPP 872
Query: 182 AGPPRGDPRPRAPRPGD-HPRRSPALRE------------TPSLSPPSPGRRNGKRAAGK 228
PP + +P P P + P+ PA++ +P PP P
Sbjct: 873 PTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPP 932
Query: 229 GTTPQPQPPPPPCAT 243
P P PPPPP A+
Sbjct: 933 SPVPAPPPPPPPTAS 947
Score = 50.8 bits (120), Expect = 2e-06
Identities = 56/238 (23%), Positives = 84/238 (35%), Gaps = 53/238 (22%)
Query: 13 PPGVAESPARPRVNEQWGSRAHPNPRS-ASSAAAAASSSFPPPGFIHPPSSRAAVHSRLR 71
PP P P+ + + ++ P+P S S +S FPPP P+ A L+
Sbjct: 831 PPVPVPPPTLPK-QQSFCAKPPPSPLSPVPSVVKQIASQFPPP-----PTPPAMESQPLK 884
Query: 72 AAPA-AAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPL 130
PA AP+ P V A + ++ P PSP
Sbjct: 885 PVPANVAPQSPPAVKAKPKWQPSSI----------------------------PVPSPDF 916
Query: 131 QPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPR 190
P +P P P PPP P +SP P +S +PG+ P
Sbjct: 917 PPPPPESSLVFPPPPPSPVPAPPPP---------PPPTASPTPDKSGSPGKKTSKTSSPG 967
Query: 191 PRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGT------TPQPQPPPPPCA 242
+ P P P+R+ +++ + P P R + K T +P + PPP A
Sbjct: 968 GKKPPP--TPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFTPPAESGSPSKETLPPPAA 1023
Score = 43.1 bits (100), Expect = 4e-04
Identities = 51/211 (24%), Positives = 77/211 (36%), Gaps = 32/211 (15%)
Query: 39 SASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGS 98
S+S + ++SSS P H S + V A + ++ V + A R G+
Sbjct: 531 SSSIKSGSSSSSIPESQSNHSNQSDSGVSDTQPAGHVRSQSIVSSVFSEAWKR-----GT 585
Query: 99 RLRAAAAAAHDQEAAAPTGRRWRRRPGPS--PPLQPRSRHPHTRYPRAVPEATPLRPPPG 156
+L ++ A + RP S PPL P+ P P + +P PPP
Sbjct: 586 QLEESSKARMES----------MNRPYTSLVPPLSPQ---PKIVTPYTASQPSPPLPPPP 632
Query: 157 TRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSL-SPP 215
P P P P P ++ P G P + R A + + +L PP
Sbjct: 633 PPPPPPPPP-----PPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKPP 687
Query: 216 SPGRRNGKRAAGK------GTTPQPQPPPPP 240
+P + + G P P PPPPP
Sbjct: 688 TPPVMQSQSVKPQILVPPNGVVPPPPPPPPP 718
>gi|95147559 ankyrin repeat domain 43 [Homo sapiens]
Length = 549
Score = 54.3 bits (129), Expect = 2e-07
Identities = 69/225 (30%), Positives = 82/225 (36%), Gaps = 37/225 (16%)
Query: 13 PPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFP----PPGFIHPPSSRAAVHS 68
PPG A P++P PRSAS+ A P PPG + P+
Sbjct: 95 PPGAAAQPSKPTSTVL--------PRSASAPGAPPLVRVPRPVEPPGDLGLPTEPQDTPG 146
Query: 69 RLRAAPA-------AAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWR 121
+ PA A P L LA A R A A RA + EAA+P
Sbjct: 147 GPASEPAQPPGERSADPPLPALELAQATERPSADAAPPPRAPS------EAASPCSDPPD 200
Query: 122 RRPGPSPPLQPRSRHPHTRYPRAVPEATPLR---PPPGTRPRAKSRPGCRSSPFPARSRT 178
PGP P + P R VP LR PG R + P RSSP R +
Sbjct: 201 AEPGPGAAKGPPQQKPCMLPVRCVPAPATLRLRAEEPGLRRQLSEEPSPRSSPLLLRRLS 260
Query: 179 PGEA------GPPRGDPRPRAPRPGDHPR-RSPALRETPSLSPPS 216
E+ GP R R R G PR SP E P+ PPS
Sbjct: 261 VEESGLGLGLGPGRSPHLRRLSRAG--PRLLSPDAEELPAAPPPS 303
Score = 32.0 bits (71), Expect = 0.85
Identities = 56/210 (26%), Positives = 66/210 (31%), Gaps = 34/210 (16%)
Query: 126 PSPPLQPRSRH-----PHTRYPRAVPE-------ATPLRPPPGTRPRAKSRPGCRSS--P 171
P+ + PRS P R PR V P P G PG RS+ P
Sbjct: 105 PTSTVLPRSASAPGAPPLVRVPRPVEPPGDLGLPTEPQDTPGGPASEPAQPPGERSADPP 164
Query: 172 FPA------RSRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRA 225
PA R +A PP PRAP P P E P PG G
Sbjct: 165 LPALELAQATERPSADAAPP-----PRAPSEAASPCSDPPDAE------PGPGAAKGPPQ 213
Query: 226 AGKGTTPQPQPPPPPCATRREEDMALRTRDRTSSRGTVFRAADWGFGRSEQHLRGLTLII 285
P P P R E+ LR R S R++ R GL L +
Sbjct: 214 QKPCMLPVRCVPAPATLRLRAEEPGLR---RQLSEEPSPRSSPLLLRRLSVEESGLGLGL 270
Query: 286 SCTLSHKPASLRRSGTQAWGPRGLPLRATP 315
S L R+G + P L A P
Sbjct: 271 GPGRSPHLRRLSRAGPRLLSPDAEELPAAP 300
Score = 28.9 bits (63), Expect = 7.2
Identities = 23/80 (28%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Query: 160 RAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSP-G 218
R K RP P PA PG A P PR P P +R + PP G
Sbjct: 80 RKKPRP---PEPEPAPFGPPGAAAQPSKPTSTVLPRSASAPGAPPLVRVPRPVEPPGDLG 136
Query: 219 RRNGKRAAGKGTTPQPQPPP 238
+ G +P PP
Sbjct: 137 LPTEPQDTPGGPASEPAQPP 156
>gi|239754458 PREDICTED: hypothetical protein [Homo sapiens]
Length = 180
Score = 53.9 bits (128), Expect = 2e-07
Identities = 56/179 (31%), Positives = 67/179 (37%), Gaps = 40/179 (22%)
Query: 41 SSAAAAASSSFPP------PGFIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGA 94
++A+ + S FPP PG PS RAA L+ P AP L R P G
Sbjct: 8 NAASCRSGSHFPPAARGRLPGETLSPSPRAAALPPLQQRPPGAPGALGRP---KPVSRGP 64
Query: 95 LAGSRLRAAAAAAHDQEAAAPTGRRWRR---RPGP-SPPLQPRSRHPHTRYPRAVPEATP 150
AG R W + RPGP PLQ R+ H + P ATP
Sbjct: 65 RAGLR-------------------EWPQQPWRPGPLGAPLQDRAPSAHVPGSASRPTATP 105
Query: 151 L------RPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRA--PRPGDHPR 201
RPP T R PG + +R P + PP D PR PRP PR
Sbjct: 106 APPRCSRRPPTTTVSRVAPSPGRPAGLHRSREPRPQDGTPPPVDTPPRTARPRPAFTPR 164
Score = 35.4 bits (80), Expect = 0.077
Identities = 28/96 (29%), Positives = 34/96 (35%), Gaps = 6/96 (6%)
Query: 154 PPGTRPRAKSR---PGCRSSPFPARSRTPGEAGPPRGDPRP--RAPRPGDHPRRSPALRE 208
PP R R P R++ P + P A G P+P R PR G R
Sbjct: 19 PPAARGRLPGETLSPSPRAAALPPLQQRPPGAPGALGRPKPVSRGPRAGLREWPQQPWRP 78
Query: 209 TPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCATR 244
P L P R G + P P PP C+ R
Sbjct: 79 GP-LGAPLQDRAPSAHVPGSASRPTATPAPPRCSRR 113
>gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo
sapiens]
Length = 180
Score = 53.9 bits (128), Expect = 2e-07
Identities = 56/179 (31%), Positives = 67/179 (37%), Gaps = 40/179 (22%)
Query: 41 SSAAAAASSSFPP------PGFIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGA 94
++A+ + S FPP PG PS RAA L+ P AP L R P G
Sbjct: 8 NAASCRSGSHFPPAARGRLPGETLSPSPRAAALPPLQQRPPGAPGALGRP---KPVSRGP 64
Query: 95 LAGSRLRAAAAAAHDQEAAAPTGRRWRR---RPGP-SPPLQPRSRHPHTRYPRAVPEATP 150
AG R W + RPGP PLQ R+ H + P ATP
Sbjct: 65 RAGLR-------------------EWPQQPWRPGPLGAPLQDRAPSAHVPGSASRPTATP 105
Query: 151 L------RPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRA--PRPGDHPR 201
RPP T R PG + +R P + PP D PR PRP PR
Sbjct: 106 APPRCSRRPPTTTVSRVAPSPGRPAGLHRSREPRPQDGTPPPVDTPPRTARPRPAFTPR 164
Score = 35.4 bits (80), Expect = 0.077
Identities = 28/96 (29%), Positives = 34/96 (35%), Gaps = 6/96 (6%)
Query: 154 PPGTRPRAKSR---PGCRSSPFPARSRTPGEAGPPRGDPRP--RAPRPGDHPRRSPALRE 208
PP R R P R++ P + P A G P+P R PR G R
Sbjct: 19 PPAARGRLPGETLSPSPRAAALPPLQQRPPGAPGALGRPKPVSRGPRAGLREWPQQPWRP 78
Query: 209 TPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCATR 244
P L P R G + P P PP C+ R
Sbjct: 79 GP-LGAPLQDRAPSAHVPGSASRPTATPAPPRCSRR 113
>gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo
sapiens]
Length = 180
Score = 53.9 bits (128), Expect = 2e-07
Identities = 56/179 (31%), Positives = 67/179 (37%), Gaps = 40/179 (22%)
Query: 41 SSAAAAASSSFPP------PGFIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGA 94
++A+ + S FPP PG PS RAA L+ P AP L R P G
Sbjct: 8 NAASCRSGSHFPPAARGRLPGETLSPSPRAAALPPLQQRPPGAPGALGRP---KPVSRGP 64
Query: 95 LAGSRLRAAAAAAHDQEAAAPTGRRWRR---RPGP-SPPLQPRSRHPHTRYPRAVPEATP 150
AG R W + RPGP PLQ R+ H + P ATP
Sbjct: 65 RAGLR-------------------EWPQQPWRPGPLGAPLQDRAPSAHVPGSASRPTATP 105
Query: 151 L------RPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRA--PRPGDHPR 201
RPP T R PG + +R P + PP D PR PRP PR
Sbjct: 106 APPRCSRRPPTTTVSRVAPSPGRPAGLHRSREPRPQDGTPPPVDTPPRTARPRPAFTPR 164
Score = 35.4 bits (80), Expect = 0.077
Identities = 28/96 (29%), Positives = 34/96 (35%), Gaps = 6/96 (6%)
Query: 154 PPGTRPRAKSR---PGCRSSPFPARSRTPGEAGPPRGDPRP--RAPRPGDHPRRSPALRE 208
PP R R P R++ P + P A G P+P R PR G R
Sbjct: 19 PPAARGRLPGETLSPSPRAAALPPLQQRPPGAPGALGRPKPVSRGPRAGLREWPQQPWRP 78
Query: 209 TPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCATR 244
P L P R G + P P PP C+ R
Sbjct: 79 GP-LGAPLQDRAPSAHVPGSASRPTATPAPPRCSRR 113
>gi|14149696 SEC31 homolog B [Homo sapiens]
Length = 1179
Score = 53.9 bits (128), Expect = 2e-07
Identities = 69/257 (26%), Positives = 100/257 (38%), Gaps = 37/257 (14%)
Query: 1 MCREKATEEAAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPP 60
M ++ E+ P GV+ PA Q+ + A+ + A + SF P PP
Sbjct: 719 MVLNRSLEQLRGPHGVSPGPATTYRVTQYANLL------AAQGSLATAMSFLPRDCAQPP 772
Query: 61 SSRAAVHSRLRAAPAAA-------PRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAA 113
+ + RL A +A P PR++ GA + + RL + +H
Sbjct: 773 VQQ--LRDRLFHAQGSAVLGQQSPPFPFPRIVVGATLHSKETSSYRL--GSQPSHQVPTP 828
Query: 114 APTGRRWRRRPGPSPPLQPRSRHPH--------TRYPRAVPEAT-PLRPPPGTRPRAKSR 164
+P R + + P+ PL P P+ + Y P+A PL PG RP A S+
Sbjct: 829 SPRPRVFTPQSSPAMPLAPSHPSPYQGPRTQNISDYRAPGPQAIQPLPLSPGVRP-ASSQ 887
Query: 165 PGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPR----RSPALRETPSLSPPSPGRR 220
P R + P G P P P +P P P S +L ETP L P P R
Sbjct: 888 PQLLGGQ---RVQVPNPVGFPGTWPLPGSPLPMACPGIMRPGSTSLPETPRLFPLLPLRP 944
Query: 221 NGKRAAGKGTTPQPQPP 237
G G+ + P PP
Sbjct: 945 LG---PGRMVSHTPAPP 958
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 53.9 bits (128), Expect = 2e-07
Identities = 78/284 (27%), Positives = 99/284 (34%), Gaps = 81/284 (28%)
Query: 7 TEEAAAP-PGVAESPARPRVNEQWGSRAHPN--------------PRSASSAAAAASSSF 51
+ AAAP P V+ + RP+ + + P P + SS SSS
Sbjct: 117 SSRAAAPRPPVSAASGRPQDDTDSSRASLPELPRMQRPSLPDLSRPNTTSSTGMKHSSSA 176
Query: 52 PPPGFIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQE 111
PPP PP R R A P P + ++ A A+++E
Sbjct: 177 PPP----PPPGR-----RANAPPTPLP---------------------MHSSKAPAYNRE 206
Query: 112 AAAPTGRRWRRRPG-PSPPLQPRSRHPHTRY--------PRAVPEATPLRPPPGTRPRAK 162
P R PG PP P + P + P P R PPG P
Sbjct: 207 KPLPPTPGQRLHPGREGPPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPPGV-PNGP 265
Query: 163 SRPGCRSSP-FPARS-----RTPGEAGPPRG--DPRPRAPRPGDHPRRSPA-LRETPSLS 213
S P S+P P R +TPG P RG P P + P R P R+ PS
Sbjct: 266 SSPTNESAPELPQRHNSLHRKTPG---PVRGLAPPPPTSASPSLLSNRPPPPARDPPSRG 322
Query: 214 ----PPSPGRRNGKRAA----------GKGTTPQPQPPPPPCAT 243
PP P RNG R A G + +PPPPP T
Sbjct: 323 AAPPPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPSRT 366
Score = 42.7 bits (99), Expect = 5e-04
Identities = 42/129 (32%), Positives = 52/129 (40%), Gaps = 13/129 (10%)
Query: 122 RRPGPSPPLQPRSRHPH--TRYPRA-VPEATPL-RP--PPGTRPRAKSRPGCRSSPFPAR 175
R P PP+ S P T RA +PE + RP P +RP S G + S
Sbjct: 119 RAAAPRPPVSAASGRPQDDTDSSRASLPELPRMQRPSLPDLSRPNTTSSTGMKHS----- 173
Query: 176 SRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQ 235
S P P R P P P H ++PA L PP+PG+R G P +
Sbjct: 174 SSAPPPPPPGRRANAPPTPLPM-HSSKAPAYNREKPL-PPTPGQRLHPGREGPPAPPPVK 231
Query: 236 PPPPPCATR 244
PPP P R
Sbjct: 232 PPPSPVNIR 240
Score = 40.0 bits (92), Expect = 0.003
Identities = 48/178 (26%), Positives = 63/178 (35%), Gaps = 19/178 (10%)
Query: 14 PGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAA 73
PG PA P V + P+P + + + S + PPP + PP S +
Sbjct: 219 PGREGPPAPPPV------KPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPSSPTNES 272
Query: 74 PAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPR 133
P+ + P LA +A+ + P R P PP P
Sbjct: 273 APELPQRHNSLHRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARDPPSRGAAPPPP-PPV 331
Query: 134 SRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRP 191
R+ +A P PPP R S P R P P SRTP AGPP P P
Sbjct: 332 IRN-------GARDAPP--PPPPYRMHG-SEPPSRGKPPPPPSRTP--AGPPPPPPPP 377
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 53.1 bits (126), Expect = 4e-07
Identities = 60/227 (26%), Positives = 81/227 (35%), Gaps = 35/227 (15%)
Query: 52 PPPGFIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQE 111
PP G P + + + A AAP + P G A R A+ + ++
Sbjct: 498 PPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQ 557
Query: 112 AAAPTGRRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSP 171
A P R GP+PP S P P P + PPG P +R ++ P
Sbjct: 558 AGPPQATRQTSVSGPAPP--KASGAP----PGGQQRQGPPQKPPG--PAGPTRQASQAGP 609
Query: 172 FPARSRTPGEAGPPRGD-PRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGT 230
P GPP PRP P P P+ P L + PS P P AAG
Sbjct: 610 VP-------RTGPPTTQQPRPSGPGPAGRPK--PQLAQKPSQDVPPP----ATAAAGGPP 656
Query: 231 TPQ-------------PQPPPPPCATRREEDMALRTRDRTSSRGTVF 264
PQ P+P PP + ++E A R S ++F
Sbjct: 657 HPQLNKSQSLTNAFNLPEPAPPRPSLSQDEVKAETIRSLRKSFASLF 703
Score = 49.7 bits (117), Expect = 4e-06
Identities = 61/228 (26%), Positives = 77/228 (33%), Gaps = 21/228 (9%)
Query: 30 GSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAP 89
G +H S + +S P G PP+ + P P+ L P
Sbjct: 429 GRGSHGQTPSPGALPLGRQTSQQPAG---PPAQQRPPPQGGPPQPGPGPQRQGPPLQQRP 485
Query: 90 ARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRH--PHTRYPRAVPE 147
G S L A + Q +PT + +PP Q + R P P A P
Sbjct: 486 PPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPA 545
Query: 148 ATPLRPPPGTR---PRAKSRPGCRSSPFP--ARSRTPG---EAGPPRGDPRPRAP----- 194
A P P R P +R S P P A PG GPP+ P P P
Sbjct: 546 ARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQAS 605
Query: 195 RPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCA 242
+ G PR P + P S P P R + A K P PPP A
Sbjct: 606 QAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQK---PSQDVPPPATA 650
Score = 48.9 bits (115), Expect = 7e-06
Identities = 48/176 (27%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 87 GAPARTGALA-GSRLRAAAAAAHDQEAAAPTGRRWRRRPGPS---PPLQPR-----SRHP 137
G GAL G + A Q+ P G + PGP PPLQ R +H
Sbjct: 434 GQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHL 493
Query: 138 HTRYPRA---VPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAP 194
P A +P+ P +P +++ P + +R G PP P P +P
Sbjct: 494 SGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARP-PASP 552
Query: 195 RPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCATRREEDMA 250
P A R+T S+S P+P + +G G+ PQ PP P R+ A
Sbjct: 553 SPQRQAGPPQATRQT-SVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQA 607
Score = 34.3 bits (77), Expect = 0.17
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 153 PPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHP-RRSPALRETPS 211
P PG P + + P PA+ R P P+G P P+PG P R+ P L++
Sbjct: 437 PSPGALPLGRQTSQQPAGP-PAQQRPP-----PQGGP----PQPGPGPQRQGPPLQQ--- 483
Query: 212 LSPPSPGRRNGKRAAGKGTTPQPQPPPPPCATRREEDMALRTRDRTSSRGTVFRAADWGF 271
PP G+++ +P PQ P P T + A + T +G R G
Sbjct: 484 -RPPPQGQQHLSGLGPPAGSPLPQRLPSP--TSAPQQPASQAAPPTQGQGRQSRPVAGGP 540
Query: 272 G 272
G
Sbjct: 541 G 541
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 53.1 bits (126), Expect = 4e-07
Identities = 67/239 (28%), Positives = 96/239 (40%), Gaps = 35/239 (14%)
Query: 10 AAAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSR 69
++A PG ++ P+ PRV +A +PR + ASS PG PS A+
Sbjct: 1058 SSAAPGSSDKPSDPRVR-----KAPTDPRLQKPTDSTASSRAAKPGPAEAPSPTASPSG- 1111
Query: 70 LRAAPAAAPRLLPRVLA-------GAPARTGALAGSRL---RAAAAAAHDQEAAAPTGRR 119
A+P A PRVLA G ++ L+G L R A E AA TG +
Sbjct: 1112 -DASPPATAPYDPRVLAAGGLGQGGGGGQSSVLSGISLYDPRTPNAGGKATEPAADTGAQ 1170
Query: 120 WRRRPGPSPPLQPRSRHPHTRYPRAV--PEATPLRPPPGT---RPRAKSRPGCRSSPFP- 173
+ G +++ P A+ PE GT R + +RP +++ P
Sbjct: 1171 PKGAEGNGKSSASKAKEPPFVRKSALEQPETGKAGADGGTPTDRYNSYNRPRPKAAAAPA 1230
Query: 174 ARSRTPGEAGPPRGDPRPRAPRPGDHPRRSPAL----RETPSLSPPSPGRRNGKRAAGK 228
A + TP PP G P P+PG H P L ++TP SP N G+
Sbjct: 1231 ATTATP----PPEGAP----PQPGVHNLPVPTLFGTVKQTPKTGSGSPFAGNSPAREGE 1281
Score = 30.4 bits (67), Expect = 2.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 13/57 (22%)
Query: 188 DPRPRAPRPG----DHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPP 240
+P P+ P PG P R P P +P NG+ G P P PPPPP
Sbjct: 505 NPLPKPP-PGVGLLPTPPRPPG--------PQAPTSPNGRPMQGGPPPPPPPPPPPP 552
Score = 29.6 bits (65), Expect = 4.2
Identities = 44/198 (22%), Positives = 60/198 (30%), Gaps = 42/198 (21%)
Query: 110 QEAAAPTGRRWRRRPGPSP------------------PLQPRSRHPHTRYPRAVPEATPL 151
Q +P GR + P P P PL P+ Y + +P +
Sbjct: 527 QAPTSPNGRPMQGGPPPPPPPPPPPPGPPQMPMPVHEPLSPQQLQQQDMYNKKIPSLFEI 586
Query: 152 RPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGP--------PRGDPRPRAPRPGDHPRRS 203
P + + G R FP PG GP P G P P HP
Sbjct: 587 VVRP--TGQLAEKLGVR---FPGPGGPPGPMGPGPNMGPPGPMGGPMHPDMHPDMHPDMH 641
Query: 204 PALRET--------PSLSPPSPGRRNG--KRAAGKGTTPQP-QPPPPPCATRREEDMALR 252
P + P ++P P G G G +P PP P A E+ +
Sbjct: 642 PDMHADMHADMPMGPGMNPGPPMGPGGPPMMPYGPGDSPHSGMMPPIPPAQNFYENFYQQ 701
Query: 253 TRDRTSSRGTVFRAADWG 270
G + A D+G
Sbjct: 702 QEGMEMEPGLLGDAEDYG 719
Score = 28.9 bits (63), Expect = 7.2
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Query: 156 GTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPR---PRAPRPGDHPRRSPALRETPSL 212
G P K PG P P R P P G P P P P P P P
Sbjct: 503 GINPLPKPPPGVGLLPTPPRPPGPQAPTSPNGRPMQGGPPPPPPPPPPPPGPPQMPMPVH 562
Query: 213 SPPSP 217
P SP
Sbjct: 563 EPLSP 567
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,118,530
Number of Sequences: 37866
Number of extensions: 1613947
Number of successful extensions: 25874
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 2404
Number of HSP's that attempted gapping in prelim test: 12336
Number of HSP's gapped (non-prelim): 10597
length of query: 350
length of database: 18,247,518
effective HSP length: 103
effective length of query: 247
effective length of database: 14,347,320
effective search space: 3543788040
effective search space used: 3543788040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.