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Search of human proteins with 239748147
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748147 PREDICTED: hypothetical protein XP_002346538 [Homo
sapiens]
(176 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753515 PREDICTED: hypothetical protein [Homo sapiens] 355 1e-98
gi|239748147 PREDICTED: hypothetical protein XP_002346538 [Homo ... 355 1e-98
gi|239742045 PREDICTED: hypothetical protein XP_002342378 [Homo ... 355 1e-98
gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens] 39 0.003
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 37 0.007
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 37 0.009
gi|59853099 dynamin 1 isoform 1 [Homo sapiens] 37 0.012
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 37 0.012
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 37 0.012
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 37 0.012
gi|31543148 hypothetical protein LOC79173 [Homo sapiens] 36 0.015
gi|239753797 PREDICTED: hypothetical protein [Homo sapiens] 36 0.020
gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo ... 36 0.020
gi|83776596 CaM kinase-like vesicle-associated [Homo sapiens] 36 0.020
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 35 0.026
gi|208431824 forkhead box I3 [Homo sapiens] 35 0.026
gi|146134388 YLP motif containing 1 [Homo sapiens] 35 0.026
gi|4504809 jun B proto-oncogene [Homo sapiens] 34 0.057
gi|56788351 THAP domain containing 7 isoform 2 [Homo sapiens] 34 0.057
gi|56788349 THAP domain containing 7 isoform 1 [Homo sapiens] 34 0.057
gi|24308215 retrotransposon gag domain containing 1 [Homo sapiens] 34 0.057
gi|116256363 transmembrane protease, serine 13 [Homo sapiens] 34 0.057
gi|239748738 PREDICTED: hypothetical protein XP_002346786 [Homo ... 34 0.075
gi|239742785 PREDICTED: hypothetical protein XP_002342651 [Homo ... 34 0.075
gi|190194381 phospholipid scramblase 4 isoform b [Homo sapiens] 33 0.098
gi|7710145 methyl-CpG binding domain protein 2 testis-specific i... 33 0.098
gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo s... 33 0.098
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 33 0.13
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 33 0.13
>gi|239753515 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 355 bits (911), Expect = 1e-98
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MCMSQSLGEKRERARESSEQAGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTK 60
MCMSQSLGEKRERARESSEQAGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTK
Sbjct: 1 MCMSQSLGEKRERARESSEQAGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTK 60
Query: 61 PGSWEPGAVRKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECPRP 120
PGSWEPGAVRKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECPRP
Sbjct: 61 PGSWEPGAVRKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECPRP 120
Query: 121 AGIQLRGLAQTGSRRVLAVTWGRRRNAGKRPGPIQRGRGLGRAPGRPLVATSSQRP 176
AGIQLRGLAQTGSRRVLAVTWGRRRNAGKRPGPIQRGRGLGRAPGRPLVATSSQRP
Sbjct: 121 AGIQLRGLAQTGSRRVLAVTWGRRRNAGKRPGPIQRGRGLGRAPGRPLVATSSQRP 176
>gi|239748147 PREDICTED: hypothetical protein XP_002346538 [Homo
sapiens]
Length = 176
Score = 355 bits (911), Expect = 1e-98
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MCMSQSLGEKRERARESSEQAGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTK 60
MCMSQSLGEKRERARESSEQAGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTK
Sbjct: 1 MCMSQSLGEKRERARESSEQAGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTK 60
Query: 61 PGSWEPGAVRKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECPRP 120
PGSWEPGAVRKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECPRP
Sbjct: 61 PGSWEPGAVRKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECPRP 120
Query: 121 AGIQLRGLAQTGSRRVLAVTWGRRRNAGKRPGPIQRGRGLGRAPGRPLVATSSQRP 176
AGIQLRGLAQTGSRRVLAVTWGRRRNAGKRPGPIQRGRGLGRAPGRPLVATSSQRP
Sbjct: 121 AGIQLRGLAQTGSRRVLAVTWGRRRNAGKRPGPIQRGRGLGRAPGRPLVATSSQRP 176
>gi|239742045 PREDICTED: hypothetical protein XP_002342378 [Homo
sapiens]
Length = 176
Score = 355 bits (911), Expect = 1e-98
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MCMSQSLGEKRERARESSEQAGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTK 60
MCMSQSLGEKRERARESSEQAGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTK
Sbjct: 1 MCMSQSLGEKRERARESSEQAGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTK 60
Query: 61 PGSWEPGAVRKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECPRP 120
PGSWEPGAVRKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECPRP
Sbjct: 61 PGSWEPGAVRKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECPRP 120
Query: 121 AGIQLRGLAQTGSRRVLAVTWGRRRNAGKRPGPIQRGRGLGRAPGRPLVATSSQRP 176
AGIQLRGLAQTGSRRVLAVTWGRRRNAGKRPGPIQRGRGLGRAPGRPLVATSSQRP
Sbjct: 121 AGIQLRGLAQTGSRRVLAVTWGRRRNAGKRPGPIQRGRGLGRAPGRPLVATSSQRP 176
>gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens]
Length = 1745
Score = 38.5 bits (88), Expect = 0.003
Identities = 36/112 (32%), Positives = 43/112 (38%), Gaps = 17/112 (15%)
Query: 8 GEKRERARES----SEQAGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTKPGS 63
GE ER E + QAG P P +LG P GSP P V + GA G K
Sbjct: 578 GEDGERGAEGPPGPTGQAGEPGPRGLLG----PRGSPGPT-GRPGVTGID-GAPGAKGNV 631
Query: 64 WEPGAV-------RKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIG 108
PG G + +P GLI T G LPG+ P+G
Sbjct: 632 GPPGEPGPPGQQGNHGSQGLPGPQGLIGTPGEKGPPGNPGIPGLPGSDGPLG 683
Score = 32.7 bits (73), Expect = 0.17
Identities = 41/124 (33%), Positives = 48/124 (38%), Gaps = 21/124 (16%)
Query: 22 GSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTKPGSWEPGAVRKGREYMPLSD- 80
G P + G G P G P L A P QMG G S PG KG + P +
Sbjct: 1352 GRVGPEGLRGIPG-PVGEPGLLGA-----PGQMGPPGPLGPSGLPGL--KG-DTGPKGEK 1402
Query: 81 ---GLITTGGPSSKASTTAARKLPGASSPIG-------AGAAASLECPRPAGIQLRGLAQ 130
GLI GP +A + LPG P G G SL P P G+ L Q
Sbjct: 1403 GHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGPKGDPGPPGPIGSLGHPGPPGV-AGPLGQ 1461
Query: 131 TGSR 134
GS+
Sbjct: 1462 KGSK 1465
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 37.4 bits (85), Expect = 0.007
Identities = 45/150 (30%), Positives = 57/150 (38%), Gaps = 18/150 (12%)
Query: 22 GSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGT------KPGSWEPGAVRKGREY 75
G+PPP P G L+ P P + G G +PG VR+ +
Sbjct: 118 GTPPPRCPRTLAPGPRG----LFPAPPPAPARTGPAGKAAADRGRPGPAAGRRVRRSPSF 173
Query: 76 MPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECPRPAGIQLRGLAQTGSRR 135
P T G + + L GA +G G+ L C R AG R G RR
Sbjct: 174 PPFLLAQ-TRLGRTGPLALCLLLLLHGAMR-LGGGSREKLACGR-AGRAARTGRGEGGRR 230
Query: 136 VLAVTWGRRRNAGKRPGPIQRGRGLGRAPG 165
GRRR +RPG R RG+ RA G
Sbjct: 231 AEEEAAGRRRR--RRPG---RTRGIPRAAG 255
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 37.0 bits (84), Expect = 0.009
Identities = 44/143 (30%), Positives = 56/143 (39%), Gaps = 33/143 (23%)
Query: 41 AALYATPLVCPVQMGATGTKPGSWEPGAVRKGREYMPLSDGLITTGGPSSKASTTAARKL 100
A+ P +CP + PG PG G P + G + A+ AAR+
Sbjct: 138 ASALPAPRLCPQR-----ASPGCSSPGVRGPGGGASPRARG-------GNAAAALAARQA 185
Query: 101 PGAS---SPIGAGAAASLECP----RPAGIQLRGLAQTGSRRVLAVTWGRRRNAGKRPGP 153
G S AG A+L C RP G G+RR + RR AG+RP P
Sbjct: 186 AGGGRSRSAFVAGRDAALACAQLPRRPRG--------AGARRGMR----RRLGAGERPAP 233
Query: 154 IQRGRGLGRAPGRPLVATSSQRP 176
R RG RAP R +RP
Sbjct: 234 --RPRGPPRAPARGARWLRPRRP 254
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 37.0 bits (84), Expect = 0.009
Identities = 44/143 (30%), Positives = 56/143 (39%), Gaps = 33/143 (23%)
Query: 41 AALYATPLVCPVQMGATGTKPGSWEPGAVRKGREYMPLSDGLITTGGPSSKASTTAARKL 100
A+ P +CP + PG PG G P + G + A+ AAR+
Sbjct: 138 ASALPAPRLCPQR-----ASPGCSSPGVRGPGGGASPRARG-------GNAAAALAARQA 185
Query: 101 PGAS---SPIGAGAAASLECP----RPAGIQLRGLAQTGSRRVLAVTWGRRRNAGKRPGP 153
G S AG A+L C RP G G+RR + RR AG+RP P
Sbjct: 186 AGGGRSRSAFVAGRDAALACAQLPRRPRG--------AGARRGMR----RRLGAGERPAP 233
Query: 154 IQRGRGLGRAPGRPLVATSSQRP 176
R RG RAP R +RP
Sbjct: 234 --RPRGPPRAPARGARWLRPRRP 254
>gi|59853099 dynamin 1 isoform 1 [Homo sapiens]
Length = 864
Score = 36.6 bits (83), Expect = 0.012
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Query: 35 APAGSPAALYATPLVCPVQMGATGTKPGSWEPGAVRKGREYMPLSDGLITTG-GPSSKAS 93
+P SP P V P + G+ G PG G+ G +P G GP +
Sbjct: 774 SPTSSPTPQRRAPAVPPARPGSRGPAPGPPPAGSALGGAPPVPSRPGASPDPFGPPPQVP 833
Query: 94 TTAARKLPGASSPIGAGAAASLECPRP 120
+ R PG S G + + E PRP
Sbjct: 834 SRPNRAPPGVPSRSGQASPSRPESPRP 860
Score = 30.4 bits (67), Expect = 0.83
Identities = 21/57 (36%), Positives = 25/57 (43%)
Query: 120 PAGIQLRGLAQTGSRRVLAVTWGRRRNAGKRPGPIQRGRGLGRAPGRPLVATSSQRP 176
PAG + + T RR AV R + G PGP G LG AP P +S P
Sbjct: 769 PAGRRSPTSSPTPQRRAPAVPPARPGSRGPAPGPPPAGSALGGAPPVPSRPGASPDP 825
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo
sapiens]
Length = 1650
Score = 36.6 bits (83), Expect = 0.012
Identities = 36/122 (29%), Positives = 44/122 (36%), Gaps = 23/122 (18%)
Query: 8 GEKRERARESSE-QAGSPPPAAVLGFTG-----APAGSPAALYATPLVCPVQMGATGTKP 61
G K +R + Q GSP P G G PAGSP + G G K
Sbjct: 1202 GAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGS-----------EGRQGGKG 1250
Query: 62 GSWEPGAVRKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIG-AGAAASLECPRP 120
+PGA+ P G + GP+ K R LPG+ G GA P P
Sbjct: 1251 AKGDPGAIGA-----PGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGP 1305
Query: 121 AG 122
G
Sbjct: 1306 VG 1307
Score = 31.6 bits (70), Expect = 0.37
Identities = 34/121 (28%), Positives = 39/121 (32%), Gaps = 30/121 (24%)
Query: 21 AGSPPPAAVLGFTGAPA--GSPAALYAT-------PLVCPVQMGATGTKPGSWEPGAV-- 69
AG P P + G G+ G P A P P G G K PG +
Sbjct: 1273 AGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGL 1332
Query: 70 --------RKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECPRPA 121
KG +P GP +PGAS PIG G L P PA
Sbjct: 1333 IGPPGEQGEKGDRGLP---------GPQGSPGQKGEMGIPGASGPIGPGGPPGL--PGPA 1381
Query: 122 G 122
G
Sbjct: 1382 G 1382
Score = 26.9 bits (58), Expect = 9.2
Identities = 30/108 (27%), Positives = 41/108 (37%), Gaps = 11/108 (10%)
Query: 20 QAGSPPPAAVLGFTG--APAGSPAALYATPLVC----PVQMGATGTK--PG-SWEPGAVR 70
QAG P P G G AG+ L+ P + G G + PG PG +
Sbjct: 1299 QAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPG--Q 1356
Query: 71 KGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECP 118
KG +P + G I GGP + GA+ P G ++ P
Sbjct: 1357 KGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGP 1404
>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo
sapiens]
Length = 1629
Score = 36.6 bits (83), Expect = 0.012
Identities = 36/122 (29%), Positives = 44/122 (36%), Gaps = 23/122 (18%)
Query: 8 GEKRERARESSE-QAGSPPPAAVLGFTG-----APAGSPAALYATPLVCPVQMGATGTKP 61
G K +R + Q GSP P G G PAGSP + G G K
Sbjct: 1181 GAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGS-----------EGRQGGKG 1229
Query: 62 GSWEPGAVRKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIG-AGAAASLECPRP 120
+PGA+ P G + GP+ K R LPG+ G GA P P
Sbjct: 1230 AKGDPGAIGA-----PGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGP 1284
Query: 121 AG 122
G
Sbjct: 1285 VG 1286
Score = 31.6 bits (70), Expect = 0.37
Identities = 34/121 (28%), Positives = 39/121 (32%), Gaps = 30/121 (24%)
Query: 21 AGSPPPAAVLGFTGAPA--GSPAALYAT-------PLVCPVQMGATGTKPGSWEPGAV-- 69
AG P P + G G+ G P A P P G G K PG +
Sbjct: 1252 AGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGL 1311
Query: 70 --------RKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECPRPA 121
KG +P GP +PGAS PIG G L P PA
Sbjct: 1312 IGPPGEQGEKGDRGLP---------GPQGSPGQKGEMGIPGASGPIGPGGPPGL--PGPA 1360
Query: 122 G 122
G
Sbjct: 1361 G 1361
Score = 26.9 bits (58), Expect = 9.2
Identities = 30/108 (27%), Positives = 41/108 (37%), Gaps = 11/108 (10%)
Query: 20 QAGSPPPAAVLGFTG--APAGSPAALYATPLVC----PVQMGATGTK--PG-SWEPGAVR 70
QAG P P G G AG+ L+ P + G G + PG PG +
Sbjct: 1278 QAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPG--Q 1335
Query: 71 KGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECP 118
KG +P + G I GGP + GA+ P G ++ P
Sbjct: 1336 KGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGP 1383
>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo
sapiens]
Length = 1736
Score = 36.6 bits (83), Expect = 0.012
Identities = 36/122 (29%), Positives = 44/122 (36%), Gaps = 23/122 (18%)
Query: 8 GEKRERARESSE-QAGSPPPAAVLGFTG-----APAGSPAALYATPLVCPVQMGATGTKP 61
G K +R + Q GSP P G G PAGSP + G G K
Sbjct: 1288 GAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGS-----------EGRQGGKG 1336
Query: 62 GSWEPGAVRKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIG-AGAAASLECPRP 120
+PGA+ P G + GP+ K R LPG+ G GA P P
Sbjct: 1337 AKGDPGAIGA-----PGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGP 1391
Query: 121 AG 122
G
Sbjct: 1392 VG 1393
Score = 31.6 bits (70), Expect = 0.37
Identities = 34/121 (28%), Positives = 39/121 (32%), Gaps = 30/121 (24%)
Query: 21 AGSPPPAAVLGFTGAPA--GSPAALYAT-------PLVCPVQMGATGTKPGSWEPGAV-- 69
AG P P + G G+ G P A P P G G K PG +
Sbjct: 1359 AGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGL 1418
Query: 70 --------RKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECPRPA 121
KG +P GP +PGAS PIG G L P PA
Sbjct: 1419 IGPPGEQGEKGDRGLP---------GPQGSPGQKGEMGIPGASGPIGPGGPPGL--PGPA 1467
Query: 122 G 122
G
Sbjct: 1468 G 1468
Score = 26.9 bits (58), Expect = 9.2
Identities = 30/108 (27%), Positives = 41/108 (37%), Gaps = 11/108 (10%)
Query: 20 QAGSPPPAAVLGFTG--APAGSPAALYATPLVC----PVQMGATGTK--PG-SWEPGAVR 70
QAG P P G G AG+ L+ P + G G + PG PG +
Sbjct: 1385 QAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPG--Q 1442
Query: 71 KGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECP 118
KG +P + G I GGP + GA+ P G ++ P
Sbjct: 1443 KGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGP 1490
>gi|31543148 hypothetical protein LOC79173 [Homo sapiens]
Length = 637
Score = 36.2 bits (82), Expect = 0.015
Identities = 57/193 (29%), Positives = 69/193 (35%), Gaps = 43/193 (22%)
Query: 6 SLGEKRERARESSEQAGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTKPGSW- 64
S GEK +R + Q G A G G P + TP P A G P SW
Sbjct: 242 SEGEKPDRG---APQEGGAQRTAGAGLPGGPQEEGDGVPCTPASAPTSGPAPGLGPASWC 298
Query: 65 -EPGAV------------RKGRE----YMPL---SDGLITTGGPSSKASTTAARKLPGAS 104
EPG+V R GRE + L S G++ S+ + R L +
Sbjct: 299 LEPGSVAQGSPDPQQTPSRMGREGEGTHSSLGCSSLGMVVIADLSTDPTELEERALE-VA 357
Query: 105 SPIGAGAAASLECPRPAGIQLRGLAQTGSRRVL-------AVTWGRRRNA---GKRPGPI 154
P G +A S PR R A G RR L T G A GK PG +
Sbjct: 358 GPDGQASAISPASPR------RKAADGGHRRALPGCTSLTGETTGESGEAGQDGKPPGDV 411
Query: 155 QRG--RGLGRAPG 165
G L APG
Sbjct: 412 LVGPTASLALAPG 424
>gi|239753797 PREDICTED: hypothetical protein [Homo sapiens]
Length = 864
Score = 35.8 bits (81), Expect = 0.020
Identities = 48/182 (26%), Positives = 64/182 (35%), Gaps = 42/182 (23%)
Query: 15 RESSEQAGSPPPAAVLGFTGAPAG----------------SPAALYATPLVCPVQMGATG 58
R+ + G P P A G PAG S +AL L CP + G T
Sbjct: 352 RQQANPQGCPRPQA-----GDPAGPTKGLKCPCLPTRRGHSRSALQKNRLHCPTE-GPTN 405
Query: 59 TKPGSWEPGAVRKGREYMPLSDGLITTGGPSSK--ASTTAARKLPGASSPIGAGAAASLE 116
P Y+ ++G GP + A T+ + GA G
Sbjct: 406 QTP-------------YIKGTEGNGPGLGPQEEPPAPLTSQPERAGAGGSHGPDQLTGNL 452
Query: 117 CPRPAGIQLRGLAQTGSRRVLAVTWGRRRNAGKRPGPIQRGRGL----GRAPGRPLVATS 172
P +Q +A T S+ +V WGR G R GP Q L G+ P + TS
Sbjct: 453 LCAPGQVQAAAMAPTSSQETYSVPWGRAGAGGSR-GPDQLTGNLLCAPGQVPAAAVAPTS 511
Query: 173 SQ 174
SQ
Sbjct: 512 SQ 513
>gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo
sapiens]
Length = 894
Score = 35.8 bits (81), Expect = 0.020
Identities = 48/182 (26%), Positives = 64/182 (35%), Gaps = 42/182 (23%)
Query: 15 RESSEQAGSPPPAAVLGFTGAPAG----------------SPAALYATPLVCPVQMGATG 58
R+ + G P P A G PAG S +AL L CP + G T
Sbjct: 352 RQQANPQGCPRPQA-----GDPAGPTKGLKCPCLPTRRGHSRSALQKNRLHCPTE-GPTN 405
Query: 59 TKPGSWEPGAVRKGREYMPLSDGLITTGGPSSK--ASTTAARKLPGASSPIGAGAAASLE 116
P Y+ ++G GP + A T+ + GA G
Sbjct: 406 QTP-------------YIKGTEGNGPGLGPQEEPPAPLTSQPERAGAGGSHGPDQLTGNL 452
Query: 117 CPRPAGIQLRGLAQTGSRRVLAVTWGRRRNAGKRPGPIQRGRGL----GRAPGRPLVATS 172
P +Q +A T S+ +V WGR G R GP Q L G+ P + TS
Sbjct: 453 LCAPGQVQAAAMAPTSSQETYSVPWGRAGAGGSR-GPDQLTGNLLCAPGQVPAAAVAPTS 511
Query: 173 SQ 174
SQ
Sbjct: 512 SQ 513
>gi|83776596 CaM kinase-like vesicle-associated [Homo sapiens]
Length = 501
Score = 35.8 bits (81), Expect = 0.020
Identities = 37/128 (28%), Positives = 47/128 (36%), Gaps = 18/128 (14%)
Query: 21 AGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTKPGSWEP---GAVRKGRE--Y 75
AG AA G T AP G A + V P AT GS P G+V +
Sbjct: 351 AGGATAAAASGATSAPEGDAARAAKSDNVAPADRSATPATDGSATPATDGSVTPATDGSI 410
Query: 76 MPLSDGLITTGGPSSKASTTAARKLPG----------ASSPIGAGAAASLECPRPAGIQL 125
P +DG +T S T R P +S+ + AAA+ P PA Q
Sbjct: 411 TPATDGSVTPATDRSATPATDGRATPATEESTVPTTQSSAMLATKAAAT---PEPAMAQP 467
Query: 126 RGLAQTGS 133
A G+
Sbjct: 468 DSTAPEGA 475
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 35.4 bits (80), Expect = 0.026
Identities = 39/126 (30%), Positives = 42/126 (33%), Gaps = 28/126 (22%)
Query: 18 SEQAGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTKPGSWEPGAVRKGREYMP 77
S AG P P V G G+P G AA + P G G + PG P
Sbjct: 848 SGPAGPPGPQGVKGERGSPGGPGAAGF------PGARGLPGPPGSNGNPGP--------P 893
Query: 78 LSDGLITTGGPSSKASTTAARKLPGASSPIG----------AGAAASLECPRPAGIQ--- 124
G GP A T A PG S P G GA P P GI
Sbjct: 894 GPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGIT 953
Query: 125 -LRGLA 129
RGLA
Sbjct: 954 GARGLA 959
Score = 33.9 bits (76), Expect = 0.075
Identities = 38/127 (29%), Positives = 46/127 (36%), Gaps = 26/127 (20%)
Query: 14 ARESSEQAGSPPPAAVLGFTGA--------PAGSPAALYATPLVCPVQMGATGTK----- 60
AR S Q G P P GF G+ PAGSP + A P Q G G +
Sbjct: 325 ARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGA-----PGQRGEPGPQGHAGA 379
Query: 61 ---PG----SWEPGAV-RKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAA 112
PG + PG G +P + GL+ GP A A L G + G A
Sbjct: 380 QGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGA 439
Query: 113 ASLECPR 119
PR
Sbjct: 440 KGEPGPR 446
>gi|208431824 forkhead box I3 [Homo sapiens]
Length = 420
Score = 35.4 bits (80), Expect = 0.026
Identities = 35/105 (33%), Positives = 37/105 (35%), Gaps = 20/105 (19%)
Query: 20 QAGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTKPGSWEPGAVRKGREYMPLS 79
Q G PPPAA GAP PAA L A P W G
Sbjct: 14 QPGLPPPAATAAAPGAP---PAARAPYGLADYAAPPAAAANPYLWLNGP----------- 59
Query: 80 DGLITTGGPSSKASTTAARKL--PGASSPIGAGAAASLECPRPAG 122
GGP S A+ AA L P P GA A L+ P AG
Sbjct: 60 ----GVGGPPSAAAAAAAAYLGAPPPPPPPGAAAGPFLQPPPAAG 100
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 35.4 bits (80), Expect = 0.026
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 95 TAARKLPGA---SSPIGAGAAASLECPRPAGIQLRG-LAQTGSRRVLAVTWGRRRNAGKR 150
++ K+PG S GA + PR AG Q RG L + GSR + R G
Sbjct: 1088 SSREKVPGGLQGSQDRGAAGSRERGPPRRAGSQERGPLRRAGSRERIPPRRAGSRERGPP 1147
Query: 151 PGPIQRGRGLGRA 163
GP R RGLGR+
Sbjct: 1148 RGPGSRERGLGRS 1160
>gi|4504809 jun B proto-oncogene [Homo sapiens]
Length = 347
Score = 34.3 bits (77), Expect = 0.057
Identities = 30/97 (30%), Positives = 32/97 (32%), Gaps = 14/97 (14%)
Query: 25 PPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTKPGSWEPGAVRKGREYMPLSDGLIT 84
PP LG TG P P +YA P PV + P S G G
Sbjct: 154 PPNVSLGATGGPPAGPGGVYAGPEPPPVYTNLSSYSPASASSG-------------GAGA 200
Query: 85 TGGPSSKASTTAARKLPGASSPIGAGAAASLECPRPA 121
G S TT LP A P G A L R A
Sbjct: 201 AVGTGSSYPTTTISYLPHA-PPFAGGHPAQLGLGRGA 236
>gi|56788351 THAP domain containing 7 isoform 2 [Homo sapiens]
Length = 309
Score = 34.3 bits (77), Expect = 0.057
Identities = 41/130 (31%), Positives = 50/130 (38%), Gaps = 29/130 (22%)
Query: 24 PPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTKPGSWEPGAVRKGREYMPLSDGLI 83
PPPA V F A +PA L A+P G EPG P SD L
Sbjct: 140 PPPADVTCFPVEEASAPATLPASP-------------AGRLEPGL------SSPFSDLLG 180
Query: 84 TTGGPSSKASTTAARKLPGASSPIG----AGAAASLECPRPAG--IQLRGLAQTGSRRVL 137
G + +A +A SP+ + +A L P PAG IQ Q GS
Sbjct: 181 PLGAQADEAGCSAQPSPERQPSPLEPRPVSPSAYMLRLPPPAGAYIQNEHSYQVGS---- 236
Query: 138 AVTWGRRRNA 147
A+ W RR A
Sbjct: 237 ALLWKRRAEA 246
>gi|56788349 THAP domain containing 7 isoform 1 [Homo sapiens]
Length = 309
Score = 34.3 bits (77), Expect = 0.057
Identities = 41/130 (31%), Positives = 50/130 (38%), Gaps = 29/130 (22%)
Query: 24 PPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTKPGSWEPGAVRKGREYMPLSDGLI 83
PPPA V F A +PA L A+P G EPG P SD L
Sbjct: 140 PPPADVTCFPVEEASAPATLPASP-------------AGRLEPGL------SSPFSDLLG 180
Query: 84 TTGGPSSKASTTAARKLPGASSPIG----AGAAASLECPRPAG--IQLRGLAQTGSRRVL 137
G + +A +A SP+ + +A L P PAG IQ Q GS
Sbjct: 181 PLGAQADEAGCSAQPSPERQPSPLEPRPVSPSAYMLRLPPPAGAYIQNEHSYQVGS---- 236
Query: 138 AVTWGRRRNA 147
A+ W RR A
Sbjct: 237 ALLWKRRAEA 246
>gi|24308215 retrotransposon gag domain containing 1 [Homo sapiens]
Length = 1388
Score = 34.3 bits (77), Expect = 0.057
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 88 PSSKASTTAARKLPGASSPIGAGAAASLECPRPAGIQLR-----GLAQTGSRRVLAVTWG 142
P+S A TT+ +P SS + + S R QL G TGS + +A +
Sbjct: 432 PASGAMTTSLMTVP--SSGVMSTEQMSATASRVMSAQLTMAKTSGAMPTGSMKAVAKQYK 489
Query: 143 RRRNAGKRPGPIQRGRGLGRAPGRPLVATSSQ 174
R +GK P++R G +P+ AT+S+
Sbjct: 490 RATASGKMSTPLRRAPTSGAMSTQPVTATASE 521
>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
Length = 567
Score = 34.3 bits (77), Expect = 0.057
Identities = 39/167 (23%), Positives = 55/167 (32%), Gaps = 24/167 (14%)
Query: 12 ERARESSEQAGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTKPGSWEPGAVRK 71
ER + P A +PAG+P + P Q GT PG P
Sbjct: 2 ERDSHGNASPARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASP----- 56
Query: 72 GREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAG---AAASLECPRPAGIQLRGL 128
+S A T R PG +SP A A+ + P A +
Sbjct: 57 ---------------AQASPAGTPPGRASPGRASPAQASPAQASPARASPALASLSRSSS 101
Query: 129 AQTGSRRVLAVTWGRRRNAGKRPGPIQRGRGLGRAPGRPLVATSSQR 175
++ S R +VT R R P+ + +P R AT + R
Sbjct: 102 GRSSSARSASVTTSPTRVYLVRATPV-GAVPIRSSPARSAPATRATR 147
>gi|239748738 PREDICTED: hypothetical protein XP_002346786 [Homo
sapiens]
Length = 121
Score = 33.9 bits (76), Expect = 0.075
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 56 ATGTKPGSWEPG-----AVRKGREYMPLSDGLITTGGPSS------KASTTAARKLPGAS 104
A G G+W PG + R+ P S + TG ++ + S + R+ P
Sbjct: 24 AAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSASWNRRHPRRP 83
Query: 105 SPIGAGAAASLECPR 119
SP+GAG+ + ECPR
Sbjct: 84 SPLGAGSGSRDECPR 98
>gi|239742785 PREDICTED: hypothetical protein XP_002342651 [Homo
sapiens]
Length = 121
Score = 33.9 bits (76), Expect = 0.075
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 56 ATGTKPGSWEPG-----AVRKGREYMPLSDGLITTGGPSS------KASTTAARKLPGAS 104
A G G+W PG + R+ P S + TG ++ + S + R+ P
Sbjct: 24 AAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSASWNRRHPRRP 83
Query: 105 SPIGAGAAASLECPR 119
SP+GAG+ + ECPR
Sbjct: 84 SPLGAGSGSRDECPR 98
>gi|190194381 phospholipid scramblase 4 isoform b [Homo sapiens]
Length = 239
Score = 33.5 bits (75), Expect = 0.098
Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 19/134 (14%)
Query: 24 PPPAAVLGFTGAPAGSPAALYA--TPLVCPVQMGATGTKPGSWEPGAVRKGREYMPLSDG 81
PP AV TG P G P Y+ P P+ G P ++PG + +P++
Sbjct: 41 PPGTAVPPPTGYPGGLPMGYYSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPIT-- 98
Query: 82 LITTGGPSSKASTTAARKLPGASSPIGAGAAASLECPRPAGIQLRGLAQTGS--RRVLAV 139
GP+ P A+ P G LE P G+ + +A+ + R V ++
Sbjct: 99 --WMPGPT-----------PMANCPPGLEYLVQLEVQCPPGVTIGFVAEHWNLCRAVYSI 145
Query: 140 TWGRRRNAGKRPGP 153
++ N + GP
Sbjct: 146 QNEKKENVMRVRGP 159
>gi|7710145 methyl-CpG binding domain protein 2 testis-specific
isoform [Homo sapiens]
Length = 302
Score = 33.5 bits (75), Expect = 0.098
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 102 GASSPIGAGAAASLECPRP-AGIQLRGLAQTGSRRVLAVTWGRRRNAGKRPGPIQRGRGL 160
G S I G S P P +G++ G G R GR + AG+ G RGRG
Sbjct: 27 GGDSAIEQGGQGSALAPSPVSGVRREGARGGGRGR------GRWKQAGRGGGVCGRGRGR 80
Query: 161 GRAPGR 166
GR GR
Sbjct: 81 GRGRGR 86
>gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo
sapiens]
Length = 411
Score = 33.5 bits (75), Expect = 0.098
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 102 GASSPIGAGAAASLECPRP-AGIQLRGLAQTGSRRVLAVTWGRRRNAGKRPGPIQRGRGL 160
G S I G S P P +G++ G G R GR + AG+ G RGRG
Sbjct: 27 GGDSAIEQGGQGSALAPSPVSGVRREGARGGGRGR------GRWKQAGRGGGVCGRGRGR 80
Query: 161 GRAPGR 166
GR GR
Sbjct: 81 GRGRGR 86
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 33.1 bits (74), Expect = 0.13
Identities = 33/114 (28%), Positives = 39/114 (34%), Gaps = 23/114 (20%)
Query: 14 ARESSEQAGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTKPGSWEPG-AVRKG 72
AR + G P P GF G P GA G EPG A KG
Sbjct: 795 ARGAPGDRGEPGPPGPAGFAGPP------------------GADGQPGAKGEPGDAGAKG 836
Query: 73 REYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGA----GAAASLECPRPAG 122
P G GP A+ G++ P GA GAA + P P+G
Sbjct: 837 DAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSG 890
Score = 30.4 bits (67), Expect = 0.83
Identities = 33/115 (28%), Positives = 37/115 (32%), Gaps = 14/115 (12%)
Query: 22 GSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTKPGSWEPGAV------------ 69
G P PA G GAP A A P GA G + E GA
Sbjct: 689 GPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDA 748
Query: 70 -RKGREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIG-AGAAASLECPRPAG 122
KG + P DG+ GP A G S P G AG + P G
Sbjct: 749 GPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRG 803
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 33.1 bits (74), Expect = 0.13
Identities = 47/156 (30%), Positives = 58/156 (37%), Gaps = 21/156 (13%)
Query: 21 AGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTKPGSWEPGAV----RKGREYM 76
AG+P A GF G P G P AT G G K + EPG +G +
Sbjct: 422 AGAPGIAGAPGFPG-PRGPPGPQGAT--------GPLGPKGQTGEPGIAGFKGEQGPKGE 472
Query: 77 PLSDGLITTGGPSSKASTTAARKLPGASSPIG----AGAAASLECPRPAGIQ-LRGLAQT 131
P G GP+ + AR PG PIG GA + P G+ +G
Sbjct: 473 PGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGE 532
Query: 132 GSRRVLAVTWGRRRNAGKRPGP--IQRGRGLGRAPG 165
LA G + G RPG + RGL PG
Sbjct: 533 RGPSGLAGPKGANGDPG-RPGEPGLPGARGLTGRPG 567
Score = 32.3 bits (72), Expect = 0.22
Identities = 46/170 (27%), Positives = 58/170 (34%), Gaps = 20/170 (11%)
Query: 14 ARESSEQAGSPPPAAVLGFTGAPA-----GSPAALYATPLVCPVQMGATGTKPGSWEPGA 68
AR + + G P +G +GAP G P A P MG G K + EPG
Sbjct: 559 ARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQ--PGVMGFPGPKGANGEPGK 616
Query: 69 VRK-------GREYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGAGAAASLECPRPA 121
+ G +P DG GP A R GA P G P
Sbjct: 617 AGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGE 676
Query: 122 GIQL--RGLAQTGSRRVLAVTWGRRRNAGKRPGP----IQRGRGLGRAPG 165
G + +G+ L G R G+R P +Q RGL PG
Sbjct: 677 GGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPG 726
Score = 32.0 bits (71), Expect = 0.28
Identities = 36/113 (31%), Positives = 41/113 (36%), Gaps = 15/113 (13%)
Query: 20 QAGSPPPAAVLGFTGAPA-----GSPA-ALYATPLVCPVQMGATGTKPGSWEPGAVRKGR 73
+ G P PA G GAP G P A +A P P G G K E G +KG
Sbjct: 805 EVGPPGPAGSAGARGAPGERGETGPPGPAGFAGP---PGADGQPGAKGEQGEAG--QKGD 859
Query: 74 EYMPLSDGLITTGGPSSKASTTAARKLPGASSPIGA----GAAASLECPRPAG 122
P G GP T + GA P GA GAA + P G
Sbjct: 860 AGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNG 912
Score = 28.9 bits (63), Expect = 2.4
Identities = 26/93 (27%), Positives = 31/93 (33%), Gaps = 1/93 (1%)
Query: 21 AGSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTKPGSWEPGAV-RKGREYMPLS 79
AG P P G G P A A P GA G + PG+ G P +
Sbjct: 353 AGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGT 412
Query: 80 DGLITTGGPSSKASTTAARKLPGASSPIGAGAA 112
DG+ G + A PG P G A
Sbjct: 413 DGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGA 445
Score = 28.5 bits (62), Expect = 3.1
Identities = 42/155 (27%), Positives = 51/155 (32%), Gaps = 14/155 (9%)
Query: 22 GSPPPAAVLGFTGAPAGSPAALYATPLVCPVQMGATGTKPGSWEPGAVRKGREYMPLSDG 81
G P P+ G GAP S P+ P G G PGA + P DG
Sbjct: 996 GLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGA-----DGPPGRDG 1050
Query: 82 LITTGGPSSKASTTAARKLPG-ASSPIGAGAAASLECPRPAGIQ-LRGLAQTGSRRVLAV 139
G + A PG SP AG AG Q G + R +
Sbjct: 1051 AAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQG 1110
Query: 140 TWGRRRNAGKRPGPIQRG-------RGLGRAPGRP 167
G R + G+ P +RG GL PG P
Sbjct: 1111 PQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPP 1145
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,618,973
Number of Sequences: 37866
Number of extensions: 499036
Number of successful extensions: 2424
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 272
Number of HSP's that attempted gapping in prelim test: 2178
Number of HSP's gapped (non-prelim): 514
length of query: 176
length of database: 18,247,518
effective HSP length: 95
effective length of query: 81
effective length of database: 14,650,248
effective search space: 1186670088
effective search space used: 1186670088
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.