Guide to the Human Genome
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Name: THAP7 Sequence: fasta or formatted (309aa) NCBI GI: 56788349
Description:

THAP domain containing 7 isoform 1

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt mRNA [309aa] THAP domain containing 7 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         32           2
 C cysteine            3.6         11           2
 D aspartate           3.9         12           1
 E glutamate           6.8         21           2
 F phenylalanine       3.2         10           1
 G glycine             6.1         19           1
 H histidine           2.3          7           1
 I isoleucine          1.6          5           1
 K lysine              4.5         14           2
 L leucine             9.4         29           2
 M methionine          1.3          4           1
 N asparagine          1.3          4           1
 P proline            10.4         32           4
 Q glutamine           5.5         17           2
 R arginine           11.0         34           2
 S serine              8.7         27           3
 T threonine           4.2         13           2
 V valine              2.6          8           1
 W tryptophan          1.0          3           1
 Y tyrosine            2.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   THAP domain containing 7 isoform 1 
THAP7                 1.000   THAP domain containing 7 isoform 2 
THAP9                 0.093   THAP domain containing 9 
THAP2                 0.062   THAP domain containing, apoptosis associated protein...
THAP6                 0.060   THAP domain containing 6 
THAP8                 0.059   THAP domain containing 8 
THAP5                 0.057   THAP domain containing 5 isoform 1 
THAP4                 0.057   THAP domain containing 4 
THAP3                 0.047   THAP domain containing, apoptosis associated protein...
PRKRIR                0.039   protein-kinase, interferon-inducible double stranded...
RERE                  0.039   atrophin-1 like protein isoform b 
RERE                  0.039   atrophin-1 like protein isoform a 
RERE                  0.039   atrophin-1 like protein isoform a 
SAMD1                 0.034   sterile alpha motif domain containing 1 
THAP1                 0.031   THAP domain containing, apoptosis associated protein ...
WASF2                 0.029   WAS protein family, member 2 
RUNX1T1               0.028   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.028   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.028   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.028   acute myelogenous leukemia 1 translocation 1 protein ...
MLL2                  0.028   myeloid/lymphoid or mixed-lineage leukemia 2 
LMTK3                 0.028   lemur tyrosine kinase 3 
BCL2L12               0.028   BCL2-like 12 isoform 3 
NACA                  0.026   nascent polypeptide-associated complex alpha subuni...
MAP7D1                0.026   MAP7 domain containing 1 
FLJ22184              0.026   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.026   PREDICTED: hypothetical protein LOC80164 
CPSF6                 0.024   cleavage and polyadenylation specific factor 6, 68 ...
DDX23                 0.024   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
FLJ22184              0.024   PREDICTED: hypothetical protein FLJ22184 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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