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Search of human proteins with 239748084
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748084 PREDICTED: hypothetical protein [Homo sapiens]
(423 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239748084 PREDICTED: hypothetical protein [Homo sapiens] 872 0.0
gi|239753576 PREDICTED: hypothetical protein [Homo sapiens] 870 0.0
gi|239741982 PREDICTED: hypothetical protein [Homo sapiens] 868 0.0
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 48 2e-05
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens] 48 2e-05
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] 47 3e-05
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 46 7e-05
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 46 7e-05
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens] 45 2e-04
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 44 3e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 44 4e-04
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 42 0.001
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 40 0.003
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 40 0.003
gi|113426528 PREDICTED: similar to hCG2042536 [Homo sapiens] 40 0.004
gi|113426210 PREDICTED: similar to hCG2042536 [Homo sapiens] 40 0.004
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 40 0.005
gi|169207782 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|169207076 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|126352446 elastin isoform d precursor [Homo sapiens] 39 0.012
gi|126352322 elastin isoform c precursor [Homo sapiens] 39 0.012
gi|126352700 elastin isoform b precursor [Homo sapiens] 39 0.012
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens] 39 0.012
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens] 39 0.012
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 39 0.012
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 39 0.012
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 39 0.012
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 39 0.012
gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens] 38 0.015
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 38 0.020
>gi|239748084 PREDICTED: hypothetical protein [Homo sapiens]
Length = 423
Score = 872 bits (2254), Expect = 0.0
Identities = 423/423 (100%), Positives = 423/423 (100%)
Query: 1 MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT 60
MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT
Sbjct: 1 MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT 60
Query: 61 EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS 120
EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS
Sbjct: 61 EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS 120
Query: 121 AELAWRVSGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGN 180
AELAWRVSGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGN
Sbjct: 121 AELAWRVSGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGN 180
Query: 181 VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA 240
VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA
Sbjct: 181 VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA 240
Query: 241 EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA 300
EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA
Sbjct: 241 EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA 300
Query: 301 AVPAAWEGTDRRRGRRRRRPSGRNGTEGSTKAGWLGTATLACSLPPHALLLPSEAARGTE 360
AVPAAWEGTDRRRGRRRRRPSGRNGTEGSTKAGWLGTATLACSLPPHALLLPSEAARGTE
Sbjct: 301 AVPAAWEGTDRRRGRRRRRPSGRNGTEGSTKAGWLGTATLACSLPPHALLLPSEAARGTE 360
Query: 361 WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR 420
WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR
Sbjct: 361 WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR 420
Query: 421 RSD 423
RSD
Sbjct: 421 RSD 423
>gi|239753576 PREDICTED: hypothetical protein [Homo sapiens]
Length = 423
Score = 870 bits (2247), Expect = 0.0
Identities = 422/423 (99%), Positives = 422/423 (99%)
Query: 1 MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT 60
MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT
Sbjct: 1 MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT 60
Query: 61 EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS 120
EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS
Sbjct: 61 EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS 120
Query: 121 AELAWRVSGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGN 180
AELAWRVSGGGSGTRLRQESPGVQGRP DGYAGGPGHGGQERIHACSLGAGRRCGGAGGN
Sbjct: 121 AELAWRVSGGGSGTRLRQESPGVQGRPPDGYAGGPGHGGQERIHACSLGAGRRCGGAGGN 180
Query: 181 VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA 240
VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA
Sbjct: 181 VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA 240
Query: 241 EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA 300
EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA
Sbjct: 241 EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA 300
Query: 301 AVPAAWEGTDRRRGRRRRRPSGRNGTEGSTKAGWLGTATLACSLPPHALLLPSEAARGTE 360
AVPAAWEGTDRRRGRRRRRPSGRNGTEGSTKAGWLGTATLACSLPPHALLLPSEAARGTE
Sbjct: 301 AVPAAWEGTDRRRGRRRRRPSGRNGTEGSTKAGWLGTATLACSLPPHALLLPSEAARGTE 360
Query: 361 WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR 420
WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR
Sbjct: 361 WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR 420
Query: 421 RSD 423
RSD
Sbjct: 421 RSD 423
>gi|239741982 PREDICTED: hypothetical protein [Homo sapiens]
Length = 423
Score = 868 bits (2242), Expect = 0.0
Identities = 421/423 (99%), Positives = 422/423 (99%)
Query: 1 MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT 60
MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT
Sbjct: 1 MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT 60
Query: 61 EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS 120
EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS
Sbjct: 61 EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS 120
Query: 121 AELAWRVSGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGN 180
AELAWRVSGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGN
Sbjct: 121 AELAWRVSGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGN 180
Query: 181 VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA 240
VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA
Sbjct: 181 VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA 240
Query: 241 EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA 300
EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA
Sbjct: 241 EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA 300
Query: 301 AVPAAWEGTDRRRGRRRRRPSGRNGTEGSTKAGWLGTATLACSLPPHALLLPSEAARGTE 360
AVPAAWEGTDRRRGRRRRRPS RNGTEGST+AGWLGTATLACSLPPHALLLPSEAARGTE
Sbjct: 301 AVPAAWEGTDRRRGRRRRRPSWRNGTEGSTEAGWLGTATLACSLPPHALLLPSEAARGTE 360
Query: 361 WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR 420
WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR
Sbjct: 361 WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR 420
Query: 421 RSD 423
RSD
Sbjct: 421 RSD 423
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 47.8 bits (112), Expect = 2e-05
Identities = 69/226 (30%), Positives = 81/226 (35%), Gaps = 63/226 (27%)
Query: 140 SPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGSCA 199
SPG GR R +G G G+ R A +L A +R G A VP
Sbjct: 97 SPGPLGR-RASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVP----------------- 138
Query: 200 LSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLP---PPPGC 256
PAL GP + A P G G SGAE A R+P PPG
Sbjct: 139 --PALRTFSPGPASP----PRASPGGR---PGSEARGRSGAECAR----RVPLHHGPPGA 185
Query: 257 GGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAP------------PPAAVPA 304
G G+ R QL P RGP G +G +R P PP A P+
Sbjct: 186 SGVGSERDRKFQLHQ--------TPARGPPFPGISGMTRGPVVLSGVNRQHRWPPGASPS 237
Query: 305 ---AWEGTDR-RRGRRRRRPSGRNGTEGSTKAGWLGTATLACSLPP 346
G +R R RR R GR G G G ACS+ P
Sbjct: 238 RSLGEAGGERPARALRRPRAPGRAGGGGPP-----GGGIPACSIGP 278
>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 47.8 bits (112), Expect = 2e-05
Identities = 69/226 (30%), Positives = 81/226 (35%), Gaps = 63/226 (27%)
Query: 140 SPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGSCA 199
SPG GR R +G G G+ R A +L A +R G A VP
Sbjct: 97 SPGPLGR-RASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVP----------------- 138
Query: 200 LSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLP---PPPGC 256
PAL GP + A P G G SGAE A R+P PPG
Sbjct: 139 --PALRTFSPGPASP----PRASPGGR---PGSEARGRSGAECAR----RVPLHHGPPGA 185
Query: 257 GGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAP------------PPAAVPA 304
G G+ R QL P RGP G +G +R P PP A P+
Sbjct: 186 SGVGSERDRKFQLHQ--------TPARGPPFPGISGMTRGPVVLSGVNRQHRWPPGASPS 237
Query: 305 ---AWEGTDR-RRGRRRRRPSGRNGTEGSTKAGWLGTATLACSLPP 346
G +R R RR R GR G G G ACS+ P
Sbjct: 238 RSLGEAGGERPARALRRPRAPGRAGGGGPP-----GGGIPACSIGP 278
>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
Length = 1073
Score = 47.4 bits (111), Expect = 3e-05
Identities = 65/212 (30%), Positives = 77/212 (36%), Gaps = 43/212 (20%)
Query: 141 PGVQGRPRD----GYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARG 196
PG+QGRP + G G PG GQE H AG GA G H A G
Sbjct: 364 PGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNP--GAPG-----------HVGAPG 410
Query: 197 SCALSPALGLA--ENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPP 254
++G PG + RG AG GPV P G A LP PP
Sbjct: 411 PSGPPGSVGAPGLRGTPGKDGERGEKG-AAGEEGSPGPV--GPRGDPGAP----GLPGPP 463
Query: 255 GCGGSGARGLR-----PEQLWSHVQHARCPQPG----RGPDASGAAGRSRAPPPAAVPAA 305
G G G GLR P L + PG RG G AG PP + P
Sbjct: 464 GKGKDGEPGLRGSPGLPGPLGTKGDRGAPGIPGSPGSRGDPGIGVAG----PPGPSGPPG 519
Query: 306 WEGTDRRRG----RRRRRPSGRNGTEGSTKAG 333
+G+ RG + P+GR+G G
Sbjct: 520 DKGSPGSRGLPGFPGPQGPAGRDGLSSLLSPG 551
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 45.8 bits (107), Expect = 7e-05
Identities = 59/214 (27%), Positives = 74/214 (34%), Gaps = 34/214 (15%)
Query: 137 RQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGR-RCGGAGGNVPVFFLINDAHAAAR 195
R PG G PR GG G GG+ C+ G GR C G+GG AR
Sbjct: 80 RGAGPGAAG-PRAAGRGGAGGGGR----CCTRGRGRFPCAGSGGR------------GAR 122
Query: 196 GSCALSPALGLAENGPGNEW--YRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPP 253
SP+ + + + W RGR A P + L + P A LP
Sbjct: 123 SRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPA---------LPAA 173
Query: 254 PGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRR 313
G GL ++ + A GR AS PP P G R
Sbjct: 174 LHIGARATAGLAAKRAQPQLCSAGTAARGRRTRASPPT-----PPRPRPPGLRSGDVPRG 228
Query: 314 GRRRRRPSGRNGTEGSTKAGWLGTATLACSLPPH 347
G R RP+GR G G A + L +P H
Sbjct: 229 GARVERPTGRRGAGGRGGAQRIPPRPLRRLVPIH 262
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 45.8 bits (107), Expect = 7e-05
Identities = 59/214 (27%), Positives = 74/214 (34%), Gaps = 34/214 (15%)
Query: 137 RQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGR-RCGGAGGNVPVFFLINDAHAAAR 195
R PG G PR GG G GG+ C+ G GR C G+GG AR
Sbjct: 80 RGAGPGAAG-PRAAGRGGAGGGGR----CCTRGRGRFPCAGSGGR------------GAR 122
Query: 196 GSCALSPALGLAENGPGNEW--YRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPP 253
SP+ + + + W RGR A P + L + P A LP
Sbjct: 123 SRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPA---------LPAA 173
Query: 254 PGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRR 313
G GL ++ + A GR AS PP P G R
Sbjct: 174 LHIGARATAGLAAKRAQPQLCSAGTAARGRRTRASPPT-----PPRPRPPGLRSGDVPRG 228
Query: 314 GRRRRRPSGRNGTEGSTKAGWLGTATLACSLPPH 347
G R RP+GR G G A + L +P H
Sbjct: 229 GARVERPTGRRGAGGRGGAQRIPPRPLRRLVPIH 262
>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
Length = 316
Score = 44.7 bits (104), Expect = 2e-04
Identities = 55/195 (28%), Positives = 68/195 (34%), Gaps = 34/195 (17%)
Query: 137 RQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGR-RCGGAGGNVPVFFLINDAHAAAR 195
R PG G PR GG G GG+ C+ G GR C G+GG AR
Sbjct: 80 RGAGPGAAG-PRAAGRGGAGGGGR----CCTRGRGRFPCAGSGGR------------GAR 122
Query: 196 GSCALSPALGLAENGPGNEW--YRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPP 253
SP+ + + + W RGR A P + L + P A LP
Sbjct: 123 SRGCHSPSCCRSSSCAWHRWPQLRGREADPRASPALLICIAPRPRPA---------LPAA 173
Query: 254 PGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRR 313
G GL ++ + A GR AS PP P G R
Sbjct: 174 LHIGARATAGLAAKRAQPQLCSAGTAARGRRTRASPPT-----PPRPRPPGLRSGDVPRG 228
Query: 314 GRRRRRPSGRNGTEG 328
G R RP+GR G G
Sbjct: 229 GARVERPTGRRGAGG 243
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 43.9 bits (102), Expect = 3e-04
Identities = 69/222 (31%), Positives = 75/222 (33%), Gaps = 64/222 (28%)
Query: 123 LAWRVSG--GGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHA----------CSLGA 170
L WR G +G R P V G PG GG A S A
Sbjct: 35 LFWRYQKTLGPAGARRGHSPPTVAPAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAA 94
Query: 171 GRRCGGAGGNVPVFFLINDAHAAARGSCAL---SPALGLAENGPGNEWYRGRPAHPAGAI 227
GRR G AG A RG A SPA G A P AG
Sbjct: 95 GRRAGPAGP---------PCRAPGRGRAAATRRSPAPGTARGSPAG-------VERAGGA 138
Query: 228 TLDGPVLDAPSGAEAATLAGVRLPPPPGCG----GSGARGLR-------PEQLWSHVQHA 276
T A S A ++ RLPPP CG G+G+R LR P S + A
Sbjct: 139 T-------AASSAGTRSVPARRLPPP--CGGTSLGAGSRALRRPGSAALPRSPSSSRRWA 189
Query: 277 RCPQPGR-GPDASG------------AAGRSRAPPPAAVPAA 305
P PG P A G AA S APPP AV A
Sbjct: 190 AMPGPGAPRPGAPGTWPVGFAVAAPPAAAASVAPPPPAVAGA 231
Score = 29.3 bits (64), Expect = 7.1
Identities = 40/138 (28%), Positives = 50/138 (36%), Gaps = 24/138 (17%)
Query: 215 WYRGRPAHPAGAITLDGPVLDAPS---GAEAATLAGVRL--PPPPGCGGSGARGLRPEQL 269
W + PAGA P AP+ G++ AG L P G AR R
Sbjct: 37 WRYQKTLGPAGARRGHSPPTVAPAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAAGR 96
Query: 270 WSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRRGRRRRRPSGRNGTEGS 329
+ C PGRG AA R+P P G R P+G G+
Sbjct: 97 RAGPAGPPCRAPGRGR----AAATRRSPAP--------------GTARGSPAGVERAGGA 138
Query: 330 TKAGWLGTATL-ACSLPP 346
T A GT ++ A LPP
Sbjct: 139 TAASSAGTRSVPARRLPP 156
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 43.5 bits (101), Expect = 4e-04
Identities = 47/164 (28%), Positives = 56/164 (34%), Gaps = 29/164 (17%)
Query: 147 PRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGSCALSPALGL 206
P G GPG G GA + G+ L+N HAAA PA+ L
Sbjct: 176 PGPGPGPGPGPG-----KPAGPGAAQTLNGSAA------LLNSHHAAA-------PAVSL 217
Query: 207 AENGPGNEWYRGRPAHP---------AGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCG 257
NGP +PA P GA P +P A A PPPP
Sbjct: 218 VNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAP 277
Query: 258 GSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAA 301
+ AR P A P G+AG + AP PAA
Sbjct: 278 ATLAR--PPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAA 319
Score = 33.5 bits (75), Expect = 0.37
Identities = 27/89 (30%), Positives = 32/89 (35%), Gaps = 7/89 (7%)
Query: 220 PAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCP 279
P HPAG T P + P+ A+ AG P P GG +P A
Sbjct: 284 PGHPAGPPTA-APAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPG------PGAAAA 336
Query: 280 QPGRGPDASGAAGRSRAPPPAAVPAAWEG 308
P G A +A PPAA A G
Sbjct: 337 APAPGVKAESPKRVVQAAPPAAQTLAASG 365
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 42.0 bits (97), Expect = 0.001
Identities = 64/224 (28%), Positives = 81/224 (36%), Gaps = 55/224 (24%)
Query: 141 PGVQGRPRD----GYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARG 196
PG+QGRP + G G PG GQE H AG GA G H A G
Sbjct: 882 PGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNP--GAPG-----------HVGAPG 928
Query: 197 SCALSPALGLA--ENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPP 254
++G PG + RG AG GPV P G A LP PP
Sbjct: 929 PSGPPGSVGAPGLRGTPGKDGERGEKG-AAGEEGSPGPV--GPRGDPGAP----GLPGPP 981
Query: 255 GCGGSGARGLR-----PEQLWSHVQ------------HARCPQPGRG----PDASGAAGR 293
G G G GLR P L + +C + RG P + G+ G
Sbjct: 982 GKGKDGEPGLRGSPGLPGPLGTKAACGKVRGSENCALGGQCVKGDRGAPGIPGSPGSRGD 1041
Query: 294 S----RAPPPAAVPAAWEGTDRRRG----RRRRRPSGRNGTEGS 329
PP + P +G+ RG + P+GR+G G+
Sbjct: 1042 PGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGN 1085
Score = 35.4 bits (80), Expect = 0.098
Identities = 55/214 (25%), Positives = 69/214 (32%), Gaps = 47/214 (21%)
Query: 130 GGSGTRLRQESPGVQG-RPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLIN 188
G G R + + G +G R DG+ G PG GQ+ S AG + G G P
Sbjct: 587 GLQGERGEKGTRGEKGERGLDGFPGKPGDTGQQGRPGPSGVAGPQ-GEKGDVGPA----- 640
Query: 189 DAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAAT---- 244
GS L + PG ++G P P + D P G +
Sbjct: 641 -GPPGVPGSVVQQEGLKGEQGAPGPRGHQGAPGPPGARGPIGPEGRDGPPGLQGLRGKKG 699
Query: 245 ---------LAGVRLPP-PPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRS 294
L G++ PP PPG G P PG P G G
Sbjct: 700 DMGPPGIPGLLGLQGPPGPPGVPGP-------------------PGPGGSPGLPGEIGFP 740
Query: 295 RAPPPAAVPAAWEGTDRRRGRRRRRPSGRNGTEG 328
P P P G D G P G GT+G
Sbjct: 741 GKPGPPG-PTGPPGKDGPNG-----PPGPPGTKG 768
Score = 32.3 bits (72), Expect = 0.83
Identities = 49/170 (28%), Positives = 57/170 (33%), Gaps = 48/170 (28%)
Query: 128 SGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLI 187
S G G R +PG+ G P G G PG G + LG CG G+
Sbjct: 962 SPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLPG-PLGTKAACGKVRGS------- 1013
Query: 188 NDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAG 247
+ A G C A PG+ RG P I + GP PSG
Sbjct: 1014 --ENCALGGQCVKGDR--GAPGIPGSPGSRGDP-----GIGVAGP--PGPSG-------- 1054
Query: 248 VRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAP 297
PP G G+RGL PG P G AGR AP
Sbjct: 1055 ----PPGDKGSPGSRGL----------------PG-FPGPQGPAGRDGAP 1083
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 40.4 bits (93), Expect = 0.003
Identities = 78/286 (27%), Positives = 105/286 (36%), Gaps = 28/286 (9%)
Query: 142 GVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPV----FFLINDAHAAARGS 197
G G R G G GG+ R A +L + G A +P L D A RG
Sbjct: 136 GSHGGRRSCGREGQGRGGRRRRAADTLF---QLGPAWPALPAPAAGRALGTDEPLALRGQ 192
Query: 198 CALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCG 257
C + G A+ N + R PAG + L L AP A AG G
Sbjct: 193 CGPAARRGCAQEQLRNAPWAPRAHSPAGRLALG---LIAP--RRGAGRAGA------GAA 241
Query: 258 GSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVP-AAWEGTDRRRGRR 316
G RG L VQ A +P P + P AA+P + + G R RG
Sbjct: 242 ACGRRGRIAAPLSGVVQKASYLRPKNLPRLLSMPSAAARPCGAALPRSGFSGRPRGRG-- 299
Query: 317 RRRPSGRNGTEGSTKAGWLGTATLACSLPPHALLLPSEAARGTEWERTVGTEDRKRDAAL 376
+GR G+ G A +G A P L + G W T E ++ A
Sbjct: 300 -GAAAGR-GSRGEHPACGVGLARGTAPQPASTWALAARPRAGGTW--TSRFEAQRGCAHQ 355
Query: 377 LVGRRDSDGRTDQRTDWQPARVAALRAERSK-ARIPRRAASRTHRR 421
RR DG + + +PARV + R + R+PR + +R
Sbjct: 356 DGQRRTRDGAGNHAS--EPARVWSPPPRRQRPRRLPRASLQEEPKR 399
Score = 33.5 bits (75), Expect = 0.37
Identities = 74/283 (26%), Positives = 95/283 (33%), Gaps = 69/283 (24%)
Query: 142 GVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGSCALS 201
G GRPR G G + AC +G R G P A+ + A
Sbjct: 290 GFSGRPRGRGGAAAGRGSRGEHPACGVGLAR------GTAP--------QPASTWALAAR 335
Query: 202 PALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGA 261
P G E RG T DG +G A+ A V PPP
Sbjct: 336 PRAGGTWTS-RFEAQRGCAHQDGQRRTRDG------AGNHASEPARVWSPPP-------- 380
Query: 262 RGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEG------TDRRRGR 315
R RP +L + + +P R P + +G A P PAAW G R GR
Sbjct: 381 RRQRPRRL---PRASLQEEPKRRPPCARPSG---AGPAREGPAAWPGGAPTPPHARPTGR 434
Query: 316 RR-RRPSGRNGTEGSTKAGWLGTATLACSLPPHALLLPSEAARGTEWERTVGTEDRKRDA 374
R+ P R G +GW HA +A G W+ G+ R+R A
Sbjct: 435 RQDPEPGPRAPRGGPASSGW------------HA-----GSAAGRGWDPGGGSRARRRAA 477
Query: 375 ALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASR 417
GR R+ L + RS R+ R AA R
Sbjct: 478 R---------GRGCLRSARSSPHARPLGSSRS-VRLLRSAAGR 510
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 40.4 bits (93), Expect = 0.003
Identities = 78/286 (27%), Positives = 105/286 (36%), Gaps = 28/286 (9%)
Query: 142 GVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPV----FFLINDAHAAARGS 197
G G R G G GG+ R A +L + G A +P L D A RG
Sbjct: 136 GSHGGRRSCGREGQGRGGRRRRAADTLF---QLGPAWPALPAPAAGRALGTDEPLALRGQ 192
Query: 198 CALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCG 257
C + G A+ N + R PAG + L L AP A AG G
Sbjct: 193 CGPAARRGCAQEQLRNAPWAPRAHSPAGRLALG---LIAP--RRGAGRAGA------GAA 241
Query: 258 GSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVP-AAWEGTDRRRGRR 316
G RG L VQ A +P P + P AA+P + + G R RG
Sbjct: 242 ACGRRGRIAAPLSGVVQKASYLRPKNLPRLLSMPSAAARPCGAALPRSGFSGRPRGRG-- 299
Query: 317 RRRPSGRNGTEGSTKAGWLGTATLACSLPPHALLLPSEAARGTEWERTVGTEDRKRDAAL 376
+GR G+ G A +G A P L + G W T E ++ A
Sbjct: 300 -GAAAGR-GSRGEHPACGVGLARGTAPQPASTWALAARPRAGGTW--TSRFEAQRGCAHQ 355
Query: 377 LVGRRDSDGRTDQRTDWQPARVAALRAERSK-ARIPRRAASRTHRR 421
RR DG + + +PARV + R + R+PR + +R
Sbjct: 356 DGQRRTRDGAGNHAS--EPARVWSPPPRRQRPRRLPRASLQEEPKR 399
Score = 33.1 bits (74), Expect = 0.49
Identities = 63/240 (26%), Positives = 81/240 (33%), Gaps = 59/240 (24%)
Query: 142 GVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGSCALS 201
G GRPR G G + AC +G R G P A+ + A
Sbjct: 290 GFSGRPRGRGGAAAGRGSRGEHPACGVGLAR------GTAP--------QPASTWALAAR 335
Query: 202 PALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGA 261
P G E RG T DG +G A+ A V PPP
Sbjct: 336 PRAGGTWTS-RFEAQRGCAHQDGQRRTRDG------AGNHASEPARVWSPPP-------- 380
Query: 262 RGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEG------TDRRRGR 315
R RP +L + + +P R P + +G A P PAAW G R GR
Sbjct: 381 RRQRPRRL---PRASLQEEPKRRPPCARPSG---AGPAREGPAAWPGGAPTPPHARPTGR 434
Query: 316 RR-RRPSGRNGTEGSTKAGWLGTATLACSLPPHALLLPSEAARGTEWERTVGTEDRKRDA 374
R+ P R G +GW HA +A G W+ G+ R+R A
Sbjct: 435 RQDPEPGPRAPRGGPASSGW------------HA-----GSAAGRGWDPGGGSRARRRAA 477
>gi|113426528 PREDICTED: similar to hCG2042536 [Homo sapiens]
Length = 847
Score = 40.0 bits (92), Expect = 0.004
Identities = 48/164 (29%), Positives = 65/164 (39%), Gaps = 17/164 (10%)
Query: 161 ERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRP 220
+R H C GAG R GGAG P + + A +A G G G E
Sbjct: 116 KRPHQCDAGAGGRRGGAG--APREWNVAYALGSATGDDDEDDGGGPRLRGAAEETRDSDL 173
Query: 221 AHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQ 280
+ + L P P +AA+ P G G G RG R ++ W + A P
Sbjct: 174 SELSDTDPLSEP---DPPARDAAS------PHQDGAPGPGPRGGRGQE-W---RPAPGPA 220
Query: 281 PGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRRGRRRRRPSGRN 324
PG+G +AS PA A +G + RRRR+ GR+
Sbjct: 221 PGQGAEASAQGRAEEEGLPAKAHA--DGEPKAGVRRRRKGVGRH 262
>gi|113426210 PREDICTED: similar to hCG2042536 [Homo sapiens]
Length = 847
Score = 40.0 bits (92), Expect = 0.004
Identities = 48/164 (29%), Positives = 65/164 (39%), Gaps = 17/164 (10%)
Query: 161 ERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRP 220
+R H C GAG R GGAG P + + A +A G G G E
Sbjct: 116 KRPHQCDAGAGGRRGGAG--APREWNVAYALGSATGDDDEDDGGGPRLRGAAEETRDSDL 173
Query: 221 AHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQ 280
+ + L P P +AA+ P G G G RG R ++ W + A P
Sbjct: 174 SELSDTDPLSEP---DPPARDAAS------PHQDGAPGPGPRGGRGQE-W---RPAPGPA 220
Query: 281 PGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRRGRRRRRPSGRN 324
PG+G +AS PA A +G + RRRR+ GR+
Sbjct: 221 PGQGAEASAQGRAEEEGLPAKAHA--DGEPKSGVRRRRKGVGRH 262
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 39.7 bits (91), Expect = 0.005
Identities = 38/129 (29%), Positives = 50/129 (38%), Gaps = 16/129 (12%)
Query: 128 SGGGSGTRLRQESPGVQGRPR---DGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVF 184
+GGG G R P +G+PR + G G A + G G G V
Sbjct: 200 AGGGKGAGSRLSWPESEGKPRVKGSKSSAGTGASVSAAATAAAAGGGGSTASTSGGV--- 256
Query: 185 FLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAAT 244
A A ARG LSP G ++ ++ + G PA +TL PS A A T
Sbjct: 257 ----GAGAGARGK--LSPRKGKSKTLDNSDLHPGPPAGSPPPLTLP----PTPSPATAVT 306
Query: 245 LAGVRLPPP 253
A + P P
Sbjct: 307 AASAQPPGP 315
>gi|169207782 PREDICTED: hypothetical protein [Homo sapiens]
Length = 330
Score = 39.7 bits (91), Expect = 0.005
Identities = 72/248 (29%), Positives = 88/248 (35%), Gaps = 20/248 (8%)
Query: 170 AGRRCGGAGGNVPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITL 229
A R GG+ G P GS G ++ G G P P G+
Sbjct: 89 ATSRLGGSRGPHPTL------PPGPAGSLVFPERRGSLQDRLGRASRPGCPPSPRGSRQE 142
Query: 230 DGPVLDAPSGAEAATLAGVRLPPPPGCGG---SGARGLRPEQLWSHVQHAR-CPQPGRGP 285
G SGA A P G GARG P AR QPGR P
Sbjct: 143 RGANSPGRSGARGCGGAAALQQEPTNFRGRPRPGARGTDPPGRTLPAPLARPSTQPGRRP 202
Query: 286 DASGAA---GRSRAPPPAAVPAAWEGTDRRR-GR--RRRRPSGRNGTEGSTKAGWLGTAT 339
AA G A A PA G DR R GR RRR P G +AG AT
Sbjct: 203 GLGRAASPLGPRGAGVTGAGPATQGGRDRGRWGRWVRRRVPCPLPGLRPHERAGAALLAT 262
Query: 340 LACSLP-PHALL--LPSEAARGTEWERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPA 396
+ P P A L L S+ + + G E R+ + ++ R D R + +P
Sbjct: 263 CRGNAPTPSACLTWLESKNKKNYDAGEACGGEKRRFHVSPVL-RPDRTPRAFRALSQRPP 321
Query: 397 RVAALRAE 404
RV L+ E
Sbjct: 322 RVPELQQE 329
>gi|169207076 PREDICTED: hypothetical protein [Homo sapiens]
Length = 330
Score = 39.7 bits (91), Expect = 0.005
Identities = 72/248 (29%), Positives = 88/248 (35%), Gaps = 20/248 (8%)
Query: 170 AGRRCGGAGGNVPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITL 229
A R GG+ G P GS G ++ G G P P G+
Sbjct: 89 ATSRLGGSRGPHPTL------PPGPAGSLVFPERRGSLQDRLGRASRPGCPPSPRGSRQE 142
Query: 230 DGPVLDAPSGAEAATLAGVRLPPPPGCGG---SGARGLRPEQLWSHVQHAR-CPQPGRGP 285
G SGA A P G GARG P AR QPGR P
Sbjct: 143 RGANSPGRSGARGCGGAAALQQEPTNFRGRPRPGARGTDPPGRTLPAPLARPSTQPGRRP 202
Query: 286 DASGAA---GRSRAPPPAAVPAAWEGTDRRR-GR--RRRRPSGRNGTEGSTKAGWLGTAT 339
AA G A A PA G DR R GR RRR P G +AG AT
Sbjct: 203 GLGRAASPLGPRGAGVTGAGPATQGGRDRGRWGRWVRRRVPCPLPGLRPHERAGAALLAT 262
Query: 340 LACSLP-PHALL--LPSEAARGTEWERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPA 396
+ P P A L L S+ + + G E R+ + ++ R D R + +P
Sbjct: 263 CRGNAPTPSACLTWLESKNKKNYDAGEACGGEKRRFHVSPVL-RPDRTPRAFRALSQRPP 321
Query: 397 RVAALRAE 404
RV L+ E
Sbjct: 322 RVPELQQE 329
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 38.5 bits (88), Expect = 0.012
Identities = 50/166 (30%), Positives = 57/166 (34%), Gaps = 32/166 (19%)
Query: 152 AGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGS---CALSPALGLAE 208
AG PG G + +GAG G G VP F + A AAA+ + A+ LG
Sbjct: 553 AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG--- 609
Query: 209 NGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGARGLRPEQ 268
G G G P GA GP A + AA A L G GG G GL
Sbjct: 610 -GLGALGGVGIPGGVVGA----GPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL---- 660
Query: 269 LWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRRG 314
G G PP AA AA G R G
Sbjct: 661 -----------------GVPGVGGLGGIPPAAAAKAAKYGVAARPG 689
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 38.5 bits (88), Expect = 0.012
Identities = 50/166 (30%), Positives = 57/166 (34%), Gaps = 32/166 (19%)
Query: 152 AGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGS---CALSPALGLAE 208
AG PG G + +GAG G G VP F + A AAA+ + A+ LG
Sbjct: 534 AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG--- 590
Query: 209 NGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGARGLRPEQ 268
G G G P GA GP A + AA A L G GG G GL
Sbjct: 591 -GLGALGGVGIPGGVVGA----GPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL---- 641
Query: 269 LWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRRG 314
G G PP AA AA G R G
Sbjct: 642 -----------------GVPGVGGLGGIPPAAAAKAAKYGVAARPG 670
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 38.5 bits (88), Expect = 0.012
Identities = 50/166 (30%), Positives = 57/166 (34%), Gaps = 32/166 (19%)
Query: 152 AGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGS---CALSPALGLAE 208
AG PG G + +GAG G G VP F + A AAA+ + A+ LG
Sbjct: 519 AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG--- 575
Query: 209 NGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGARGLRPEQ 268
G G G P GA GP A + AA A L G GG G GL
Sbjct: 576 -GLGALGGVGIPGGVVGA----GPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL---- 626
Query: 269 LWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRRG 314
G G PP AA AA G R G
Sbjct: 627 -----------------GVPGVGGLGGIPPAAAAKAAKYGVAARPG 655
>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 38.5 bits (88), Expect = 0.012
Identities = 79/333 (23%), Positives = 114/333 (34%), Gaps = 50/333 (15%)
Query: 128 SGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQ------ERIHACSLGAGRRCGGAGGNV 181
+GG L+ E G R G+A G G E++ +GAG R G G
Sbjct: 484 AGGRGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACG--- 540
Query: 182 PVFFLINDAHAAARGS--CALSPALGLAEN--GPGNEWYRGRPAHPAGA---ITLDGPVL 234
P I R L+ ALG + G G PA A A I G L
Sbjct: 541 PHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDL 600
Query: 235 DAPSGAEAATLAGVRLPPPPGCGGSGA---RGLRPEQLWSHVQHARCPQPGRG------- 284
D P P G GG G+ +G P S + +R P R
Sbjct: 601 DGPRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPR 660
Query: 285 PDASGAAGRSRAPPPAAVPAAWEGTD---------RRRGRRRRRPSGRNGTEGSTKAGWL 335
P ++ +AG +P P + +G R+ RR R G S +A W+
Sbjct: 661 PASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWV 720
Query: 336 GTATLACSLPPHALLLPSEAARGTEWERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQP 395
+ T P S ARG+ ++ G + +L RD + +W P
Sbjct: 721 RSTT------PRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSRDDEPLAGAPEEWPP 774
Query: 396 ARVAALRAER---------SKARIPRRAASRTH 419
+++ RA R + + RAA+ H
Sbjct: 775 PGLSSRRAPRFLIKSSPAPGRRALAARAANHAH 807
>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 38.5 bits (88), Expect = 0.012
Identities = 79/333 (23%), Positives = 114/333 (34%), Gaps = 50/333 (15%)
Query: 128 SGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQ------ERIHACSLGAGRRCGGAGGNV 181
+GG L+ E G R G+A G G E++ +GAG R G G
Sbjct: 484 AGGRGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACG--- 540
Query: 182 PVFFLINDAHAAARGS--CALSPALGLAEN--GPGNEWYRGRPAHPAGA---ITLDGPVL 234
P I R L+ ALG + G G PA A A I G L
Sbjct: 541 PHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDL 600
Query: 235 DAPSGAEAATLAGVRLPPPPGCGGSGA---RGLRPEQLWSHVQHARCPQPGRG------- 284
D P P G GG G+ +G P S + +R P R
Sbjct: 601 DGPRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPR 660
Query: 285 PDASGAAGRSRAPPPAAVPAAWEGTD---------RRRGRRRRRPSGRNGTEGSTKAGWL 335
P ++ +AG +P P + +G R+ RR R G S +A W+
Sbjct: 661 PASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWV 720
Query: 336 GTATLACSLPPHALLLPSEAARGTEWERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQP 395
+ T P S ARG+ ++ G + +L RD + +W P
Sbjct: 721 RSTT------PRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSRDDEPLAGAPEEWPP 774
Query: 396 ARVAALRAER---------SKARIPRRAASRTH 419
+++ RA R + + RAA+ H
Sbjct: 775 PGLSSRRAPRFLIKSSPAPGRRALAARAANHAH 807
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 38.5 bits (88), Expect = 0.012
Identities = 51/221 (23%), Positives = 70/221 (31%), Gaps = 43/221 (19%)
Query: 129 GGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAG----GNVPVF 184
GGG G G G G G G G + A + A GG G G
Sbjct: 255 GGGGG--------GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG 306
Query: 185 FLINDAHAAARGSCALSPALGLAEN---------GPGNEWYRGRPAHPAGAITLDGPVLD 235
+ + + G + P G A + G + + G+ HP+GA +L
Sbjct: 307 YGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLT 366
Query: 236 APS------GAEAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASG 289
+PS G + PPPP P Q S A G+ A
Sbjct: 367 SPSPMMRSYGGSYPEYSSPSAPPPP-----------PSQPQSQAAAAGAAAGGQQAAAGM 415
Query: 290 AAGRSRAPPPAAVPAAWEGTDRRRGRRRRRPSGRNGTEGST 330
G+ AA AW ++R P+ GT G T
Sbjct: 416 GLGKDMGAQYAAASPAWAA-----AQQRSHPAMSPGTPGPT 451
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 38.5 bits (88), Expect = 0.012
Identities = 51/221 (23%), Positives = 70/221 (31%), Gaps = 43/221 (19%)
Query: 129 GGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAG----GNVPVF 184
GGG G G G G G G G + A + A GG G G
Sbjct: 255 GGGGG--------GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG 306
Query: 185 FLINDAHAAARGSCALSPALGLAEN---------GPGNEWYRGRPAHPAGAITLDGPVLD 235
+ + + G + P G A + G + + G+ HP+GA +L
Sbjct: 307 YGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLT 366
Query: 236 APS------GAEAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASG 289
+PS G + PPPP P Q S A G+ A
Sbjct: 367 SPSPMMRSYGGSYPEYSSPSAPPPP-----------PSQPQSQAAAAGAAAGGQQAAAGM 415
Query: 290 AAGRSRAPPPAAVPAAWEGTDRRRGRRRRRPSGRNGTEGST 330
G+ AA AW ++R P+ GT G T
Sbjct: 416 GLGKDMGAQYAAASPAWAA-----AQQRSHPAMSPGTPGPT 451
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 38.5 bits (88), Expect = 0.012
Identities = 51/221 (23%), Positives = 70/221 (31%), Gaps = 43/221 (19%)
Query: 129 GGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAG----GNVPVF 184
GGG G G G G G G G + A + A GG G G
Sbjct: 255 GGGGG--------GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG 306
Query: 185 FLINDAHAAARGSCALSPALGLAEN---------GPGNEWYRGRPAHPAGAITLDGPVLD 235
+ + + G + P G A + G + + G+ HP+GA +L
Sbjct: 307 YGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLT 366
Query: 236 APS------GAEAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASG 289
+PS G + PPPP P Q S A G+ A
Sbjct: 367 SPSPMMRSYGGSYPEYSSPSAPPPP-----------PSQPQSQAAAAGAAAGGQQAAAGM 415
Query: 290 AAGRSRAPPPAAVPAAWEGTDRRRGRRRRRPSGRNGTEGST 330
G+ AA AW ++R P+ GT G T
Sbjct: 416 GLGKDMGAQYAAASPAWAA-----AQQRSHPAMSPGTPGPT 451
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 38.5 bits (88), Expect = 0.012
Identities = 32/93 (34%), Positives = 34/93 (36%), Gaps = 14/93 (15%)
Query: 217 RGRPAHPAGAITLDGPV---------LDAPSGAEAATLAGVRLPPPPGCGGSGARGLRPE 267
RG PA A A P AP+ A A A PP PG G R R
Sbjct: 116 RGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAA 175
Query: 268 QLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA 300
L A P P P + AG RAPPPA
Sbjct: 176 PL-----AAPPPAPAAPPAVAPPAGPRRAPPPA 203
>gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens]
Length = 1142
Score = 38.1 bits (87), Expect = 0.015
Identities = 52/173 (30%), Positives = 62/173 (35%), Gaps = 43/173 (24%)
Query: 140 SPGVQGRPRD----GYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAAR 195
S GV+G P D G G PG GQ+ G AG P
Sbjct: 502 SQGVKGEPGDPGPPGLIGSPGLKGQQ-------------GSAGSMGP---------RGPP 539
Query: 196 GSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPG 255
G L G+ PG + +G P G I P L P G A G LP PG
Sbjct: 540 GDVGLPGEHGI----PGKQGIKGEKGDPGGII--GPPGLPGPKGE--AGPPGKSLPGEPG 591
Query: 256 CGGS----GARGLRPEQLWSHVQHARCPQPGR-GPDASGAAGRSRAPPPAAVP 303
G+ G RG + E+ V + PG GP G GR+ A PA P
Sbjct: 592 LDGNPGAPGPRGPKGERGLPGVHGS----PGDIGPQGIGIPGRTGAQGPAGEP 640
Score = 31.2 bits (69), Expect = 1.9
Identities = 44/175 (25%), Positives = 57/175 (32%), Gaps = 22/175 (12%)
Query: 141 PGVQGRP-------RDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAA 193
PG+ GR GY G PG G E + G G G P + H
Sbjct: 737 PGIPGREGPKGSKGERGYPGIPGEKGDEGLQ----GIPGIPGAPGPTGPPGLMGRTGHPG 792
Query: 194 ARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPP 253
G+ + G PG G P P + G + G PP
Sbjct: 793 PTGAKGEKGSDG----PPGKPGPPGPPGIPFNERNGMSSLYKIKGGVNVPSYPGPPGPPG 848
Query: 254 PG-----CGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVP 303
P G GA GL + + V+ R P P +G +G+ AP P VP
Sbjct: 849 PKGDPGPVGEPGAMGLPGLEGFPGVKGDR--GPAGPPGIAGMSGKPGAPGPPGVP 901
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 37.7 bits (86), Expect = 0.020
Identities = 68/225 (30%), Positives = 79/225 (35%), Gaps = 40/225 (17%)
Query: 130 GGSGTRLRQESPGVQGRPRD-GYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLIN 188
G G Q +PG+QG P + G AG PG G +R A GA G G +
Sbjct: 713 GAPGAPGSQGAPGLQGMPGERGAAGLPGPKG-DRGDAGPKGADGSPGKDGVRGLTGPIGP 771
Query: 189 DAHAAARGSCALSPALGL-----AENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEA- 242
A A G S G A PG+ RG P P A P D GA+
Sbjct: 772 PGPAGAPGDKGESGPSGPAGPTGARGAPGD---RGEPGPPGPAGFAGPPGADGQPGAKGE 828
Query: 243 ---ATLAGVRLPP-------PPG----CGGSGARGLRPEQLWSHVQHARCPQPGRGPDAS 288
A G PP PPG G GA+G R A P P A+
Sbjct: 829 PGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGS--------AGPPGATGFPGAA 880
Query: 289 GAAG-----RSRAPPPAAVPAAWEGTDRRRGRRRRRPSGRNGTEG 328
G G + PP PA EG RG P+GR G G
Sbjct: 881 GRVGPPGPSGNAGPPGPPGPAGKEGGKGPRG--ETGPAGRPGEVG 923
Score = 30.8 bits (68), Expect = 2.4
Identities = 58/218 (26%), Positives = 73/218 (33%), Gaps = 57/218 (26%)
Query: 130 GGSGTRLRQESPGVQGRPRDGYAGGP-------GHGGQERIHACSLGAG-RRCGGAGGNV 181
G +G PG QG P D A GP G G+ + AG R GA GN
Sbjct: 647 GPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGN- 705
Query: 182 PVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLD----AP 237
A+G A G ++ PG +G P GA L GP D P
Sbjct: 706 ----------DGAKGDAGAPGAPG-SQGAPG---LQGMPGE-RGAAGLPGPKGDRGDAGP 750
Query: 238 SGAEAAT-LAGVR-----LPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAA 291
GA+ + GVR + PP G G +G P GP + A
Sbjct: 751 KGADGSPGKDGVRGLTGPIGPPGPAGAPGDKG------------ESGPSGPAGPTGARGA 798
Query: 292 GRSRAPPPAAVPAAWEGTDRRRGRRRRRPSGRNGTEGS 329
R P PA + G P G +G G+
Sbjct: 799 PGDRGEPGPPGPAGFAG-----------PPGADGQPGA 825
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,114,749
Number of Sequences: 37866
Number of extensions: 1317541
Number of successful extensions: 7141
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 477
Number of HSP's that attempted gapping in prelim test: 6315
Number of HSP's gapped (non-prelim): 1173
length of query: 423
length of database: 18,247,518
effective HSP length: 105
effective length of query: 318
effective length of database: 14,271,588
effective search space: 4538364984
effective search space used: 4538364984
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.