LOC100290292 19113

Name: LOC100290292	Sequence: fasta or formatted (144aa)		NCBI GI: 239747220
Description: PREDICTED: hypothetical protein XP_002346936		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 7 1 C cysteine 3.5 5 2 D aspartate 4.2 6 1 E glutamate 10.4 15 1 F phenylalanine 1.4 2 1 G glycine 19.4 28 2 H histidine 1.4 2 1 I isoleucine 0.7 1 1 K lysine 2.1 3 1 L leucine 5.6 8 2 M methionine 2.1 3 1 N asparagine 0.7 1 1 P proline 6.2 9 1 Q glutamine 9.7 14 2 R arginine 7.6 11 2 S serine 6.2 9 2 T threonine 2.8 4 1 V valine 5.6 8 1 W tryptophan 5.6 8 2 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002346936 LOC100293712 1.000 PREDICTED: hypothetical protein LOC100287356 1.000 PREDICTED: hypothetical protein XP_002342067 RP1L1 0.027 retinitis pigmentosa 1-like 1 SNAPC3 0.027 small nuclear RNA activating complex, polypeptide 3,... COL24A1 0.020 collagen, type XXIV, alpha 1 HNRNPUL2 0.020 heterogeneous nuclear ribonucleoprotein U-like 2 [H... LCE5A 0.020 late cornified envelope 5A ALDH7A1 0.017 aldehyde dehydrogenase 7 family, member A1 BCL11B 0.017 B-cell CLL/lymphoma 11B isoform 1 BCL11B 0.017 B-cell CLL/lymphoma 11B isoform 2 COL5A2 0.017 alpha 2 type V collagen preproprotein RAPGEF1 0.017 guanine nucleotide-releasing factor 2 isoform b [Hom... RAPGEF1 0.017 guanine nucleotide-releasing factor 2 isoform a [Hom... FLG2 0.014 filaggrin family member 2 COL4A2 0.014 alpha 2 type IV collagen preproprotein COL27A1 0.014 collagen, type XXVII, alpha 1 TRIOBP 0.014 TRIO and F-actin binding protein isoform 6 COL25A1 0.014 collagen, type XXV, alpha 1 isoform 1 COL25A1 0.014 collagen, type XXV, alpha 1 isoform 2 CCDC88B 0.014 coiled-coil domain containing 88 DGKE 0.010 diacylglycerol kinase epsilon C1orf68 0.010 skin-specific protein 32 ALDH1L1 0.010 aldehyde dehydrogenase 1 family, member L1 RPGR 0.010 retinitis pigmentosa GTPase regulator isoform C [Hom... COL5A3 0.010 collagen, type V, alpha 3 preproprotein TAF15 0.010 TBP-associated factor 15 isoform 2 TAF15 0.010 TBP-associated factor 15 isoform 1 GIGYF1 0.010 PERQ amino acid rich, with GYF domain 1 COL7A1 0.007 alpha 1 type VII collagen precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.