Guide to the Human Genome
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Name: ALDH1L1 Sequence: fasta or formatted (902aa) NCBI GI: 21614513
Description:

aldehyde dehydrogenase 1 family, member L1

Referenced in:

Alcohol and Aldehyde Dehydrogenases
Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         78           3
 C cysteine            1.7         15           1
 D aspartate           6.0         54           2
 E glutamate           7.0         63           2
 F phenylalanine       4.9         44           3
 G glycine             8.9         80           2
 H histidine           2.2         20           2
 I isoleucine          5.3         48           3
 K lysine              6.5         59           2
 L leucine             8.9         80           3
 M methionine          2.2         20           2
 N asparagine          3.7         33           1
 P proline             4.5         41           1
 Q glutamine           3.3         30           1
 R arginine            4.3         39           2
 S serine              4.9         44           2
 T threonine           5.1         46           1
 V valine              8.9         80           2
 W tryptophan          1.2         11           1
 Y tyrosine            1.9         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aldehyde dehydrogenase 1 family, member L1 
ALDH1L2               0.776   aldehyde dehydrogenase 1 family, member L2 
ALDH1A2               0.250   aldehyde dehydrogenase 1A2 isoform 1 
ALDH1A1               0.246   aldehyde dehydrogenase 1A1 
ALDH1B1               0.243   aldehyde dehydrogenase 1B1 precursor 
ALDH1A3               0.242   aldehyde dehydrogenase 1A3 
ALDH2                 0.240   mitochondrial aldehyde dehydrogenase 2 precursor [Ho...
ALDH1A2               0.228   aldehyde dehydrogenase 1A2 isoform 3 
ALDH1A2               0.217   aldehyde dehydrogenase 1A2 isoform 2 
ALDH9A1               0.179   aldehyde dehydrogenase 9A1 
ALDH8A1               0.162   aldehyde dehydrogenase 8A1 isoform 1 
ALDH5A1               0.141   aldehyde dehydrogenase 5A1 isoform 2 precursor 
ALDH5A1               0.136   aldehyde dehydrogenase 5A1 isoform 1 precursor [Homo...
ALDH8A1               0.124   aldehyde dehydrogenase 8A1 isoform 2 
ALDH7A1               0.097   aldehyde dehydrogenase 7 family, member A1 
ALDH6A1               0.083   aldehyde dehydrogenase 6A1 precursor 
ALDH16A1              0.081   aldehyde dehydrogenase 16 family, member A1 isoform...
ALDH4A1               0.057   aldehyde dehydrogenase 4A1 isoform a precursor [Homo...
ALDH4A1               0.057   aldehyde dehydrogenase 4A1 isoform b 
ALDH4A1               0.057   aldehyde dehydrogenase 4A1 isoform a precursor [Homo...
ALDH3A1               0.056   aldehyde dehydrogenase 3A1 
ALDH3A1               0.056   aldehyde dehydrogenase 3A1 
ALDH3A1               0.056   aldehyde dehydrogenase 3A1 
ALDH3A2               0.055   aldehyde dehydrogenase 3A2 isoform 2 
ALDH3A2               0.055   aldehyde dehydrogenase 3A2 isoform 1 
ALDH16A1              0.049   aldehyde dehydrogenase 16 family, member A1 isoform...
ALDH3B1               0.049   aldehyde dehydrogenase 3B1 isoform a 
ALDH3B1               0.049   aldehyde dehydrogenase 3B1 isoform b 
ALDH3B1               0.049   aldehyde dehydrogenase 3B1 isoform a 
ALDH3B2               0.048   aldehyde dehydrogenase 3B2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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