| Name: LOC100287558 | Sequence: fasta or formatted (909aa) | NCBI GI: 239744995 | |
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Description: PREDICTED: hypothetical protein XP_002343325
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 10.8 98 3 C cysteine 3.7 34 2 D aspartate 2.3 21 2 E glutamate 6.3 57 2 F phenylalanine 1.0 9 1 G glycine 12.1 110 3 H histidine 3.3 30 2 I isoleucine 1.9 17 1 K lysine 1.7 15 1 L leucine 8.6 78 2 M methionine 1.4 13 1 N asparagine 1.2 11 1 P proline 12.0 109 3 Q glutamine 6.1 55 2 R arginine 7.7 70 3 S serine 7.7 70 3 T threonine 4.1 37 1 V valine 5.8 53 2 W tryptophan 1.5 14 1 Y tyrosine 0.9 8 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343325 LOC100291299 0.657 PREDICTED: hypothetical protein XP_002347506 LOC100293509 0.243 PREDICTED: hypothetical protein SYN1 0.016 synapsin I isoform Ia SYN1 0.016 synapsin I isoform Ib HCN2 0.012 hyperpolarization activated cyclic nucleotide-gated... COL2A1 0.012 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.012 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL5A1 0.012 alpha 1 type V collagen preproprotein COL3A1 0.011 collagen type III alpha 1 preproprotein COL4A2 0.011 alpha 2 type IV collagen preproprotein NACA 0.011 nascent polypeptide-associated complex alpha subuni... C6orf174 0.011 hypothetical protein LOC387104 ANKRD33B 0.011 PREDICTED: ankyrin repeat domain 33B CDKN1C 0.010 cyclin-dependent kinase inhibitor 1C isoform b [Hom... CDKN1C 0.010 cyclin-dependent kinase inhibitor 1C isoform b [Hom... CDKN1C 0.010 cyclin-dependent kinase inhibitor 1C isoform a OGFR 0.010 opioid growth factor receptor RERE 0.010 atrophin-1 like protein isoform b RERE 0.010 atrophin-1 like protein isoform a RERE 0.010 atrophin-1 like protein isoform a SAMD1 0.010 sterile alpha motif domain containing 1 PCLO 0.010 piccolo isoform 2 PCLO 0.010 piccolo isoform 1 SRRM2 0.010 splicing coactivator subunit SRm300 TAF4 0.010 TBP-associated factor 4 MYLK3 0.010 myosin light chain kinase 3 COL11A1 0.010 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.010 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.010 alpha 1 type XI collagen isoform A preproprotein [Ho...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
