Guide to the Human Genome
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Name: LOC729590 Sequence: fasta or formatted (124aa) NCBI GI: 239744029
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt mRNA {124aa} PREDICTED: hypothetical protein
alt mRNA {124aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.1         15           3
 C cysteine            1.6          2           1
 D aspartate           1.6          2           1
 E glutamate           1.6          2           1
 F phenylalanine       2.4          3           1
 G glycine            16.1         20           2
 H histidine           1.6          2           1
 I isoleucine          0.8          1           1
 K lysine              0.8          1           1
 L leucine             2.4          3           1
 M methionine          2.4          3           1
 N asparagine          0.0          0           0
 P proline            11.3         14           1
 Q glutamine           4.0          5           1
 R arginine           18.5         23           3
 S serine             12.1         15           1
 T threonine           2.4          3           1
 V valine              4.0          5           1
 W tryptophan          1.6          2           1
 Y tyrosine            2.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC729590             1.000   PREDICTED: hypothetical protein 
LOC729590             1.000   PREDICTED: hypothetical protein 
C14orf4               0.064   chromosome 14 open reading frame 4 
LOC100291533          0.051   PREDICTED: hypothetical protein XP_002347080 
LOC100288002          0.051   PREDICTED: hypothetical protein XP_002342946 
LOC100294439          0.042   PREDICTED: similar to Os05g0242100 
ZNF385A               0.042   zinc finger protein 385A isoform a 
ZNF385A               0.042   zinc finger protein 385A isoform c 
ZNF318                0.042   zinc finger protein 318 
LOC100131851          0.038   PREDICTED: hypothetical protein 
LOC100130751          0.038   PREDICTED: hypothetical protein 
LOC728650             0.038   PREDICTED: hypothetical protein 
LOC100131851          0.038   PREDICTED: hypothetical protein 
SYN3                  0.038   synapsin III isoform IIIg 
SYN3                  0.038   synapsin III isoform IIIa 
COL4A1                0.038   alpha 1 type IV collagen preproprotein 
ALPK3                 0.034   alpha-kinase 3 
SRRM2                 0.034   splicing coactivator subunit SRm300 
LOC728503             0.034   PREDICTED: hypothetical protein 
LOC729570             0.034   PREDICTED: hypothetical protein 
LOC728503             0.034   PREDICTED: hypothetical protein 
LOC729570             0.034   PREDICTED: hypothetical protein 
LOC728503             0.034   PREDICTED: hypothetical protein 
LOC729570             0.034   PREDICTED: hypothetical protein 
BBC3                  0.034   BCL2 binding component 3 isoform 1 
ZCCHC3                0.034   zinc finger, CCHC domain containing 3 
C7orf51               0.034   hypothetical protein FLJ37538 
LOC100291952          0.034   PREDICTED: hypothetical protein XP_002344992 
LOC100291076          0.034   PREDICTED: hypothetical protein XP_002347846 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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