LOC100288109 17751

Name: LOC100288109	Sequence: fasta or formatted (148aa)		NCBI GI: 239743803
Description: PREDICTED: hypothetical protein XP_002342963		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.5 14 1 C cysteine 2.0 3 1 D aspartate 3.4 5 2 E glutamate 2.7 4 1 F phenylalanine 1.4 2 1 G glycine 15.5 23 2 H histidine 2.7 4 2 I isoleucine 1.4 2 1 K lysine 4.1 6 1 L leucine 11.5 17 2 M methionine 1.4 2 1 N asparagine 0.0 0 0 P proline 8.1 12 2 Q glutamine 6.1 9 4 R arginine 10.1 15 1 S serine 8.1 12 1 T threonine 4.7 7 1 V valine 3.4 5 1 W tryptophan 4.1 6 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342963 COL9A3 0.028 alpha 3 type IX collagen ABCB10 0.024 ATP-binding cassette, sub-family B, member 10 [Homo... COL1A1 0.024 alpha 1 type I collagen preproprotein COL4A3 0.024 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.024 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.024 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.024 alpha 3 type IV collagen isoform 1 precursor COL5A3 0.024 collagen, type V, alpha 3 preproprotein NAV3 0.024 neuron navigator 3 LOC65998 0.024 hypothetical protein LOC65998 LOC100128398 0.024 PREDICTED: hypothetical protein LOC100128398 0.024 PREDICTED: hypothetical protein LOC100128398 0.024 PREDICTED: hypothetical protein COL5A2 0.021 alpha 2 type V collagen preproprotein HMCN2 0.021 PREDICTED: hemicentin 2 HMCN2 0.021 PREDICTED: hemicentin 2 HMCN2 0.021 PREDICTED: hemicentin 2 SHANK1 0.021 SH3 and multiple ankyrin repeat domains 1 SMCR7 0.017 Smith-Magenis syndrome chromosome region, candidate... BTBD11 0.017 BTB (POZ) domain containing 11 isoform a LOC100291455 0.017 PREDICTED: hypothetical protein XP_002346892 LOC100288744 0.017 PREDICTED: hypothetical protein XP_002342752 LOC100288744 0.017 PREDICTED: hypothetical protein COL18A1 0.017 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.017 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.017 alpha 1 type XVIII collagen isoform 1 precursor [Ho... COL19A1 0.017 alpha 1 type XIX collagen precursor COL11A1 0.014 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.014 alpha 1 type XI collagen isoform C preproprotein [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.