SMCR7 14279

Name: SMCR7	Sequence: fasta or formatted (205aa)		NCBI GI: 222080060
Description: Smith-Magenis syndrome chromosome region, candidate 7 isoform 3		Not currently referenced in the text
Other entries for this name: alt prot {465aa} Smith-Magenis syndrome chromosome region, candidate 7 isoform 2 alt prot {454aa} Smith-Magenis syndrome chromosome region, candidate 7 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 16.6 34 2 C cysteine 2.0 4 1 D aspartate 4.4 9 2 E glutamate 3.9 8 1 F phenylalanine 2.0 4 1 G glycine 16.1 33 3 H histidine 2.0 4 1 I isoleucine 1.5 3 1 K lysine 2.9 6 1 L leucine 10.2 21 2 M methionine 1.0 2 1 N asparagine 0.5 1 1 P proline 9.8 20 3 Q glutamine 2.9 6 1 R arginine 7.8 16 2 S serine 7.3 15 3 T threonine 3.4 7 1 V valine 3.9 8 1 W tryptophan 2.0 4 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Smith-Magenis syndrome chromosome region, candidate... SMCR7 0.449 Smith-Magenis syndrome chromosome region, candidate... SMCR7 0.449 Smith-Magenis syndrome chromosome region, candidate ... SMCR7L 0.136 hypothetical protein LOC54471 COL1A1 0.038 alpha 1 type I collagen preproprotein IRF2BP1 0.038 interferon regulatory factor 2 binding protein 1 [Ho... ZNF628 0.038 zinc finger protein 628 VASP 0.035 vasodilator-stimulated phosphoprotein TAF4 0.035 TBP-associated factor 4 LOC100127891 0.035 PREDICTED: similar to hCG2042508 LOC100127891 0.035 PREDICTED: similar to hCG2042508 LOC100127891 0.035 PREDICTED: similar to hCG2042508 LOC284988 0.033 PREDICTED: hypothetical protein COL7A1 0.033 alpha 1 type VII collagen precursor COL9A1 0.033 alpha 1 type IX collagen isoform 1 precursor COL9A1 0.033 alpha 1 type IX collagen isoform 2 precursor MBD6 0.033 methyl-CpG binding domain protein 6 EWSR1 0.030 Ewing sarcoma breakpoint region 1 isoform 4 EWSR1 0.030 Ewing sarcoma breakpoint region 1 isoform 2 COL5A2 0.030 alpha 2 type V collagen preproprotein LOC100293055 0.030 PREDICTED: similar to COL22A1 protein LOC100293375 0.030 PREDICTED: hypothetical protein RBM12 0.030 RNA binding motif protein 12 RBM12 0.030 RNA binding motif protein 12 MARCH11 0.030 membrane-associated ring finger (C3HC4) 11 COL22A1 0.030 collagen, type XXII, alpha 1 MNX1 0.030 homeo box HB9 COL23A1 0.030 collagen, type XXIII, alpha 1 LOC100133554 0.030 PREDICTED: hypothetical protein LOC100133554 0.030 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.