| Name: LOC100287297 | Sequence: fasta or formatted (329aa) | NCBI GI: 239743660 | |
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Description: PREDICTED: hypothetical protein XP_002342926
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 7.9 26 2 C cysteine 2.4 8 2 D aspartate 3.6 12 1 E glutamate 5.5 18 1 F phenylalanine 0.9 3 1 G glycine 12.2 40 2 H histidine 2.1 7 1 I isoleucine 1.2 4 1 K lysine 3.0 10 2 L leucine 9.1 30 2 M methionine 1.2 4 1 N asparagine 2.4 8 1 P proline 14.6 48 2 Q glutamine 5.5 18 1 R arginine 10.9 36 4 S serine 7.9 26 1 T threonine 4.6 15 1 V valine 3.3 11 2 W tryptophan 1.5 5 1 Y tyrosine 0.0 0 0 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342926 LOC100289699 0.366 PREDICTED: hypothetical protein XP_002347072 LOC100292240 0.357 PREDICTED: hypothetical protein FLJ22184 0.040 PREDICTED: hypothetical protein LOC80164 COL22A1 0.039 collagen, type XXII, alpha 1 FLJ22184 0.037 PREDICTED: hypothetical protein FLJ22184 COL27A1 0.037 collagen, type XXVII, alpha 1 PRB2 0.034 proline-rich protein BstNI subfamily 2 COL4A3 0.034 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.034 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.034 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.034 alpha 3 type IV collagen isoform 1 precursor LOC100293055 0.033 PREDICTED: similar to COL22A1 protein SYN1 0.033 synapsin I isoform Ia COL1A1 0.031 alpha 1 type I collagen preproprotein LOC100294444 0.031 PREDICTED: similar to family with sequence similari... FAM48B2 0.031 family with sequence similarity 48, member B2 [Homo... FLJ22184 0.031 PREDICTED: hypothetical protein FLJ22184 EMID1 0.031 EMI domain containing 1 COL11A1 0.030 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.030 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.030 alpha 1 type XI collagen isoform A preproprotein [Ho... LOC729370 0.030 PREDICTED: hypothetical protein AEBP1 0.030 adipocyte enhancer binding protein 1 precursor [Homo... MAST3 0.030 microtubule associated serine/threonine kinase 3 [H... COL7A1 0.028 alpha 1 type VII collagen precursor SFPQ 0.028 splicing factor proline/glutamine rich (polypyrimidin... SRRM2 0.028 splicing coactivator subunit SRm300 COL19A1 0.028 alpha 1 type XIX collagen precursor SCARF2 0.028 scavenger receptor class F, member 2 isoform 1 [Homo...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
