Search of human proteins with 239743287

Search of human proteins with 239743287

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239743287 PREDICTED: hypothetical protein [Homo sapiens]
         (191 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754648 PREDICTED: hypothetical protein [Homo sapiens]           409   e-115
gi|239749207 PREDICTED: hypothetical protein [Homo sapiens]           409   e-115
gi|239743287 PREDICTED: hypothetical protein [Homo sapiens]           409   e-115
gi|239508971 PREDICTED: hypothetical protein [Homo sapiens]           409   e-115
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]            31   0.57 
gi|194239729 eukaryotic translation elongation factor 1 delta is...    30   1.3  
gi|156071472 CD2 molecule [Homo sapiens]                               29   2.8  
gi|13027630 DiGeorge syndrome critical region protein 14 [Homo s...    29   2.8  
gi|239757909 PREDICTED: hypothetical protein [Homo sapiens]            28   3.7  
gi|239752421 PREDICTED: hypothetical protein [Homo sapiens]            28   3.7  
gi|239746936 PREDICTED: hypothetical protein [Homo sapiens]            28   3.7  
gi|22091448 GDNF family receptor alpha 4 isoform b precursor [Ho...    28   3.7  
gi|8394456 toll-like receptor 9 isoform A precursor [Homo sapiens]     28   4.8  
gi|10863889 squamous cell carcinoma antigen recognized by T cell...    28   4.8  
gi|112807226 hypothetical protein LOC91748 [Homo sapiens]              28   4.8  
gi|154816198 transcription elongation factor B polypeptide 3C-li...    28   4.8  
gi|156938279 transcription elongation factor B polypeptide 3C [H...    28   4.8  
gi|44890062 hypothetical protein LOC91748 [Homo sapiens]               28   4.8  
gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens]    28   6.3  
gi|239749594 PREDICTED: hypothetical protein XP_002347096 [Homo ...    28   6.3  
gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo sap...    28   6.3  
gi|239743861 PREDICTED: hypothetical protein XP_002342981 [Homo ...    28   6.3  
gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo sap...    28   6.3  
gi|19923312 v-myc myelocytomatosis viral related oncogene, neuro...    28   6.3  
gi|187960045 kynurenine 3-monooxygenase [Homo sapiens]                 28   6.3  
gi|38348296 C-type lectin domain family 4, member G [Homo sapiens]     28   6.3  
gi|239756199 PREDICTED: hypothetical protein [Homo sapiens]            27   8.2  
gi|239755810 PREDICTED: hypothetical protein [Homo sapiens]            27   8.2  
gi|239750310 PREDICTED: hypothetical protein [Homo sapiens]            27   8.2  
gi|239744621 PREDICTED: hypothetical protein [Homo sapiens]            27   8.2  

>gi|239754648 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 377

 Score =  409 bits (1052), Expect = e-115
 Identities = 191/191 (100%), Positives = 191/191 (100%)

Query: 1   MQPVCVMQDHSLGCQVTYLGNPDPHPGQELGPADERLVVFAEAWGPVNQKIRALILHHTH 60
           MQPVCVMQDHSLGCQVTYLGNPDPHPGQELGPADERLVVFAEAWGPVNQKIRALILHHTH
Sbjct: 187 MQPVCVMQDHSLGCQVTYLGNPDPHPGQELGPADERLVVFAEAWGPVNQKIRALILHHTH 246

Query: 61  QHLGAVEVSRVDEGLWGVTEEVSIYHRHEGEPEDAFLRQHVPFVVHQDLRWSCPKAGYQL 120
           QHLGAVEVSRVDEGLWGVTEEVSIYHRHEGEPEDAFLRQHVPFVVHQDLRWSCPKAGYQL
Sbjct: 247 QHLGAVEVSRVDEGLWGVTEEVSIYHRHEGEPEDAFLRQHVPFVVHQDLRWSCPKAGYQL 306

Query: 121 CVIPTSAAWRTAHKVGQLRGPATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHR 180
           CVIPTSAAWRTAHKVGQLRGPATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHR
Sbjct: 307 CVIPTSAAWRTAHKVGQLRGPATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHR 366

Query: 181 GGSRALPKQRH 191
           GGSRALPKQRH
Sbjct: 367 GGSRALPKQRH 377


>gi|239749207 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 369

 Score =  409 bits (1052), Expect = e-115
 Identities = 191/191 (100%), Positives = 191/191 (100%)

Query: 1   MQPVCVMQDHSLGCQVTYLGNPDPHPGQELGPADERLVVFAEAWGPVNQKIRALILHHTH 60
           MQPVCVMQDHSLGCQVTYLGNPDPHPGQELGPADERLVVFAEAWGPVNQKIRALILHHTH
Sbjct: 179 MQPVCVMQDHSLGCQVTYLGNPDPHPGQELGPADERLVVFAEAWGPVNQKIRALILHHTH 238

Query: 61  QHLGAVEVSRVDEGLWGVTEEVSIYHRHEGEPEDAFLRQHVPFVVHQDLRWSCPKAGYQL 120
           QHLGAVEVSRVDEGLWGVTEEVSIYHRHEGEPEDAFLRQHVPFVVHQDLRWSCPKAGYQL
Sbjct: 239 QHLGAVEVSRVDEGLWGVTEEVSIYHRHEGEPEDAFLRQHVPFVVHQDLRWSCPKAGYQL 298

Query: 121 CVIPTSAAWRTAHKVGQLRGPATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHR 180
           CVIPTSAAWRTAHKVGQLRGPATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHR
Sbjct: 299 CVIPTSAAWRTAHKVGQLRGPATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHR 358

Query: 181 GGSRALPKQRH 191
           GGSRALPKQRH
Sbjct: 359 GGSRALPKQRH 369


>gi|239743287 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 191

 Score =  409 bits (1052), Expect = e-115
 Identities = 191/191 (100%), Positives = 191/191 (100%)

Query: 1   MQPVCVMQDHSLGCQVTYLGNPDPHPGQELGPADERLVVFAEAWGPVNQKIRALILHHTH 60
           MQPVCVMQDHSLGCQVTYLGNPDPHPGQELGPADERLVVFAEAWGPVNQKIRALILHHTH
Sbjct: 1   MQPVCVMQDHSLGCQVTYLGNPDPHPGQELGPADERLVVFAEAWGPVNQKIRALILHHTH 60

Query: 61  QHLGAVEVSRVDEGLWGVTEEVSIYHRHEGEPEDAFLRQHVPFVVHQDLRWSCPKAGYQL 120
           QHLGAVEVSRVDEGLWGVTEEVSIYHRHEGEPEDAFLRQHVPFVVHQDLRWSCPKAGYQL
Sbjct: 61  QHLGAVEVSRVDEGLWGVTEEVSIYHRHEGEPEDAFLRQHVPFVVHQDLRWSCPKAGYQL 120

Query: 121 CVIPTSAAWRTAHKVGQLRGPATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHR 180
           CVIPTSAAWRTAHKVGQLRGPATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHR
Sbjct: 121 CVIPTSAAWRTAHKVGQLRGPATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHR 180

Query: 181 GGSRALPKQRH 191
           GGSRALPKQRH
Sbjct: 181 GGSRALPKQRH 191


>gi|239508971 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 369

 Score =  409 bits (1052), Expect = e-115
 Identities = 191/191 (100%), Positives = 191/191 (100%)

Query: 1   MQPVCVMQDHSLGCQVTYLGNPDPHPGQELGPADERLVVFAEAWGPVNQKIRALILHHTH 60
           MQPVCVMQDHSLGCQVTYLGNPDPHPGQELGPADERLVVFAEAWGPVNQKIRALILHHTH
Sbjct: 179 MQPVCVMQDHSLGCQVTYLGNPDPHPGQELGPADERLVVFAEAWGPVNQKIRALILHHTH 238

Query: 61  QHLGAVEVSRVDEGLWGVTEEVSIYHRHEGEPEDAFLRQHVPFVVHQDLRWSCPKAGYQL 120
           QHLGAVEVSRVDEGLWGVTEEVSIYHRHEGEPEDAFLRQHVPFVVHQDLRWSCPKAGYQL
Sbjct: 239 QHLGAVEVSRVDEGLWGVTEEVSIYHRHEGEPEDAFLRQHVPFVVHQDLRWSCPKAGYQL 298

Query: 121 CVIPTSAAWRTAHKVGQLRGPATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHR 180
           CVIPTSAAWRTAHKVGQLRGPATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHR
Sbjct: 299 CVIPTSAAWRTAHKVGQLRGPATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHR 358

Query: 181 GGSRALPKQRH 191
           GGSRALPKQRH
Sbjct: 359 GGSRALPKQRH 369


>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 31.2 bits (69), Expect = 0.57
 Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 14/88 (15%)

Query: 114 PKAGYQLCVIPTSAAW----RTAHKVGQLRGPATGLSHAHRGPGSIGGTALQHGP----V 165
           P AG  LC    SAAW    R +   G+  GPA       R PG     A +  P     
Sbjct: 69  PGAGGPLCFPARSAAWGPPARASRAAGRRAGPA---GPPCRAPGRGRAAATRRSPAPGTA 125

Query: 166 EQAPAG---RGQQVHAHRGGSRALPKQR 190
             +PAG    G    A   G+R++P +R
Sbjct: 126 RGSPAGVERAGGATAASSAGTRSVPARR 153


>gi|194239729 eukaryotic translation elongation factor 1 delta
           isoform 4 [Homo sapiens]
          Length = 257

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 137 QLRGPATGLSHAHRGPGSIGGTALQHG 163
           Q+ GP  G S    GPG+  GT+  HG
Sbjct: 28  QMNGPVAGASRQSSGPGASSGTSGDHG 54


>gi|156071472 CD2 molecule [Homo sapiens]
          Length = 351

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 6/48 (12%)

Query: 148 AHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHRG----GSRALPKQRH 191
           +HR P    G  +QH P ++ PA  G QVH  +G      R  PK  H
Sbjct: 294 SHRPPPP--GHRVQHQPQKRPPAPSGTQVHQQKGPPLPRPRVQPKPPH 339


>gi|13027630 DiGeorge syndrome critical region protein 14 [Homo
           sapiens]
          Length = 476

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)

Query: 65  AVEVSRVDEGLWGVTEEVSIYHRHEGEPEDAFLRQHVPFVVHQDLRWSCPKAGYQL--CV 122
           A+E S+     W    + S+ +  EG P++  L +    VVH++ R+        L  C 
Sbjct: 205 AIESSQASVETWKYKAKNSLMYYPEGVPDEEQLFKKPRQVVHKNTRFLRDPFSQALSRCQ 264

Query: 123 IPTSAAWRTAHKVGQLRGP 141
           +  +AA    HK G++ GP
Sbjct: 265 LQQAAALNAQHKQGKV-GP 282


>gi|239757909 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 127

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 13/24 (54%), Positives = 15/24 (62%)

Query: 167 QAPAGRGQQVHAHRGGSRALPKQR 190
           QA  GRGQ+   HRGGSR    +R
Sbjct: 93  QALRGRGQERRGHRGGSRGREARR 116


>gi|239752421 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 127

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 13/24 (54%), Positives = 15/24 (62%)

Query: 167 QAPAGRGQQVHAHRGGSRALPKQR 190
           QA  GRGQ+   HRGGSR    +R
Sbjct: 93  QALRGRGQERRGHRGGSRGREARR 116


>gi|239746936 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 127

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 13/24 (54%), Positives = 15/24 (62%)

Query: 167 QAPAGRGQQVHAHRGGSRALPKQR 190
           QA  GRGQ+   HRGGSR    +R
Sbjct: 93  QALRGRGQERRGHRGGSRGREARR 116


>gi|22091448 GDNF family receptor alpha 4 isoform b precursor [Homo
           sapiens]
          Length = 299

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 7/59 (11%)

Query: 136 GQLRGPATGLSHAHRGPGS----IGGTALQHGPVE---QAPAGRGQQVHAHRGGSRALP 187
           G  RG   GLS AHR P +     G + L H   +   + PAG G+ + A   G R +P
Sbjct: 138 GPWRGWGRGLSPAHRPPAAQASPPGLSGLVHPSAQRPRRLPAGPGRPLPARLRGPRGVP 196


>gi|8394456 toll-like receptor 9 isoform A precursor [Homo sapiens]
          Length = 1032

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 6/34 (17%)

Query: 84  IYHRHEGEPEDAFLRQHVPFVVHQDLRWSCPKAG 117
           I+H H+ +        H+P + H +L+W+CP  G
Sbjct: 75  IHHLHDSD------FAHLPSLRHLNLKWNCPPVG 102


>gi|10863889 squamous cell carcinoma antigen recognized by T cells 1
           [Homo sapiens]
          Length = 800

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 3/42 (7%)

Query: 144 GLSHAHRGPGSIGGT---ALQHGPVEQAPAGRGQQVHAHRGG 182
           G S  HRG     GT   A   G  EQ P  R  + H HR G
Sbjct: 2   GSSKKHRGEKEAAGTTAAAGTGGATEQPPRHREHKKHKHRSG 43


>gi|112807226 hypothetical protein LOC91748 [Homo sapiens]
          Length = 1045

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 45/197 (22%), Positives = 69/197 (35%), Gaps = 36/197 (18%)

Query: 1   MQPVCVMQDHSLGCQVTYLGNPDPHPGQELGPADERLVVFAEAWGPVNQKIRALILHHTH 60
           +QP  +   H +  QV   G P P+P                A+ P  Q+ +        
Sbjct: 214 LQPFQLAFGHQVNRQVFRQGPPPPNP--------------VAAFPPQKQQQQQQPQQQQQ 259

Query: 61  QHLGAVEVSRVDEGLWGVTEEVSIYHRHEG-EPEDAFLRQHV--------PFVVHQD--- 108
           Q   A+    + E  + + ++ S   +  G +P     + H+        PF  + D   
Sbjct: 260 QQQAALPQMPLFENFYSMPQQPSQQPQDFGLQPAGPLGQSHLAHHSMAPYPFPPNPDMNP 319

Query: 109 ------LRWSCPKAGYQLCVIPTSAAWRTAHKVGQLRGPATGLSHAHRGPG--SIGGTAL 160
                 L+ S P+       IP     R   K G L  P + L  A   PG  + G   L
Sbjct: 320 ELRKALLQDSAPQPALPQVQIPFPRRSRRLSKEGIL--PPSALDGAGTQPGQEATGNLFL 377

Query: 161 QHGPVEQAPAGRGQQVH 177
            H P++Q P G   Q H
Sbjct: 378 HHWPLQQPPPGSLGQPH 394


>gi|154816198 transcription elongation factor B polypeptide 3C-like
           [Homo sapiens]
          Length = 546

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 136 GQLRGPATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHRGGSRALP 187
           GQ +G A G SH+     S G +A +  PV+++ + R Q   A   G + +P
Sbjct: 213 GQPQGEAVG-SHSKGHKSSRGASAQKSPPVQESQSERLQAAGADSAGPKTVP 263


>gi|156938279 transcription elongation factor B polypeptide 3C [Homo
           sapiens]
          Length = 546

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 136 GQLRGPATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHRGGSRALP 187
           GQ +G A G SH+     S G +A +  PV+++ + R Q   A   G + +P
Sbjct: 213 GQPQGEAVG-SHSKGHKSSRGASAQKSPPVQESQSERLQAAGADSAGPKTVP 263


>gi|44890062 hypothetical protein LOC91748 [Homo sapiens]
          Length = 1045

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 45/197 (22%), Positives = 69/197 (35%), Gaps = 36/197 (18%)

Query: 1   MQPVCVMQDHSLGCQVTYLGNPDPHPGQELGPADERLVVFAEAWGPVNQKIRALILHHTH 60
           +QP  +   H +  QV   G P P+P                A+ P  Q+ +        
Sbjct: 214 LQPFQLAFGHQVNRQVFRQGPPPPNP--------------VAAFPPQKQQQQQQPQQQQQ 259

Query: 61  QHLGAVEVSRVDEGLWGVTEEVSIYHRHEG-EPEDAFLRQHV--------PFVVHQD--- 108
           Q   A+    + E  + + ++ S   +  G +P     + H+        PF  + D   
Sbjct: 260 QQQAALPQMPLFENFYSMPQQPSQQPQDFGLQPAGPLGQSHLAHHSMAPYPFPPNPDMNP 319

Query: 109 ------LRWSCPKAGYQLCVIPTSAAWRTAHKVGQLRGPATGLSHAHRGPG--SIGGTAL 160
                 L+ S P+       IP     R   K G L  P + L  A   PG  + G   L
Sbjct: 320 ELRKALLQDSAPQPALPQVQIPFPRRSRRLSKEGIL--PPSALDGAGTQPGQEATGNLFL 377

Query: 161 QHGPVEQAPAGRGQQVH 177
            H P++Q P G   Q H
Sbjct: 378 HHWPLQQPPPGSLGQPH 394


>gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens]
          Length = 694

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 152 PGSIGGTALQHGPVEQAPAGRGQQ--VHAHRGGSRALPKQ 189
           P  IGG + +H     +  G+G+Q    A+ GGS ++P Q
Sbjct: 593 PSGIGGVSPRHALTSPSLGGQGRQNLWFANPGGSNSMPSQ 632


>gi|239749594 PREDICTED: hypothetical protein XP_002347096 [Homo
           sapiens]
          Length = 201

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 7/47 (14%)

Query: 141 PATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHRGGSRALP 187
           P+ GL H  R P          GP + A  GRG+QV  H    R LP
Sbjct: 28  PSPGLQH--RNP-----LETPPGPSKAARRGRGEQVRTHLAPVRVLP 67


>gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo
           sapiens]
          Length = 451

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 5/37 (13%)

Query: 139 RGPATGLSHAHRGPG-----SIGGTALQHGPVEQAPA 170
           RG    +  AHRGP        G  A QHG VE+ PA
Sbjct: 239 RGAPRPVHRAHRGPSLQQETHQGRVAPQHGQVERGPA 275


>gi|239743861 PREDICTED: hypothetical protein XP_002342981 [Homo
           sapiens]
          Length = 139

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 7/47 (14%)

Query: 141 PATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHRGGSRALP 187
           P+ GL H  R P          GP + A  GRG+QV  H    R LP
Sbjct: 28  PSPGLQH--RNP-----LETPPGPSKAARRGRGEQVRTHLAPVRVLP 67


>gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo
           sapiens]
          Length = 487

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 5/37 (13%)

Query: 139 RGPATGLSHAHRGPG-----SIGGTALQHGPVEQAPA 170
           RG    +  AHRGP        G  A QHG VE+ PA
Sbjct: 239 RGAPRPVHRAHRGPSLQQETHQGRVAPQHGQVERGPA 275


>gi|19923312 v-myc myelocytomatosis viral related oncogene,
           neuroblastoma derived [Homo sapiens]
          Length = 464

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 139 RGPATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHRG-GSRALPKQ 189
           R  +  L H  RGP + G TA   G    +PAGRG    A  G    ALP +
Sbjct: 128 RAVSEKLQHG-RGPPTAGSTAQSPGAGAASPAGRGHGGAAGAGRAGAALPAE 178


>gi|187960045 kynurenine 3-monooxygenase [Homo sapiens]
          Length = 486

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 139 RGPATGLSHAHRGPGSIGGTALQHGPVEQAPAGRGQQVHAHRGGSRALP 187
           RG +  L+ +HRG  ++    L+   V Q    R + +H+  G   A+P
Sbjct: 50  RGRSINLALSHRGRQALKAVGLEDQIVSQGIPMRARMIHSLSGKKSAIP 98


>gi|38348296 C-type lectin domain family 4, member G [Homo sapiens]
          Length = 293

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 5/49 (10%)

Query: 61  QHLGAVEVSRVDEGLWGVTEEVSIYHRHEGEPEDAFLRQHVPFVVHQDL 109
           +HLG V+  +  +G+      +S  H ++GEP DA+ R++   ++H  L
Sbjct: 229 RHLGKVQGYQWVDGV-----SLSFSHWNQGEPNDAWGRENCVMMLHTGL 272


>gi|239756199 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 182

 Score = 27.3 bits (59), Expect = 8.2
 Identities = 11/32 (34%), Positives = 13/32 (40%)

Query: 99  QHVPFVVHQDLRWSCPKAGYQLCVIPTSAAWR 130
           QH     H D +W CPK    +   P    WR
Sbjct: 148 QHTQPSTHLDQQWGCPKPVSLIVATPHCQPWR 179


>gi|239755810 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 499

 Score = 27.3 bits (59), Expect = 8.2
 Identities = 19/68 (27%), Positives = 24/68 (35%), Gaps = 17/68 (25%)

Query: 126 SAAWRTAHKVGQLRGPATGLSHAHRGPGSIGGTALQH-------------GPVEQAPAGR 172
           +A WR  H  GQ   P  G S    G    GG  + H             G   +AP  R
Sbjct: 123 TAGWRRHHSTGQPGAPVLGGS----GTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPR 178

Query: 173 GQQVHAHR 180
            ++ H  R
Sbjct: 179 NREAHLRR 186


>gi|239750310 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 499

 Score = 27.3 bits (59), Expect = 8.2
 Identities = 19/68 (27%), Positives = 24/68 (35%), Gaps = 17/68 (25%)

Query: 126 SAAWRTAHKVGQLRGPATGLSHAHRGPGSIGGTALQH-------------GPVEQAPAGR 172
           +A WR  H  GQ   P  G S    G    GG  + H             G   +AP  R
Sbjct: 123 TAGWRRHHSTGQPGAPVLGGS----GTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPR 178

Query: 173 GQQVHAHR 180
            ++ H  R
Sbjct: 179 NREAHLRR 186


>gi|239744621 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 536

 Score = 27.3 bits (59), Expect = 8.2
 Identities = 19/68 (27%), Positives = 24/68 (35%), Gaps = 17/68 (25%)

Query: 126 SAAWRTAHKVGQLRGPATGLSHAHRGPGSIGGTALQH-------------GPVEQAPAGR 172
           +A WR  H  GQ   P  G S    G    GG  + H             G   +AP  R
Sbjct: 160 TAGWRRHHSTGQPGAPVLGGS----GTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPR 215

Query: 173 GQQVHAHR 180
            ++ H  R
Sbjct: 216 NREAHLRR 223


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,486,582
Number of Sequences: 37866
Number of extensions: 482128
Number of successful extensions: 1218
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1201
Number of HSP's gapped (non-prelim): 36
length of query: 191
length of database: 18,247,518
effective HSP length: 96
effective length of query: 95
effective length of database: 14,612,382
effective search space: 1388176290
effective search space used: 1388176290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.