Guide to the Human Genome
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Name: GFRA4 Sequence: fasta or formatted (299aa) NCBI GI: 22091448
Description:

GDNF family receptor alpha 4 isoform b precursor

Referenced in:

Neurons

Other entries for this name:
alt prot [269aa] GDNF family receptor alpha 4 isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.4         43           3
 C cysteine            6.4         19           1
 D aspartate           2.7          8           1
 E glutamate           3.0          9           1
 F phenylalanine       3.0          9           2
 G glycine             9.7         29           2
 H histidine           1.3          4           1
 I isoleucine          0.7          2           1
 K lysine              0.0          0           0
 L leucine            12.4         37           7
 M methionine          0.3          1           1
 N asparagine          2.3          7           1
 P proline            11.4         34           2
 Q glutamine           3.3         10           1
 R arginine           13.0         39           3
 S serine              6.7         20           2
 T threonine           2.3          7           1
 V valine              5.0         15           1
 W tryptophan          1.3          4           1
 Y tyrosine            0.7          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GDNF family receptor alpha 4 isoform b precursor [Ho... 
GFRA4                 0.735   GDNF family receptor alpha 4 isoform a precursor [Ho...
GFRA1                 0.193   GDNF family receptor alpha 1 isoform b preproprotei...
GFRA1                 0.193   GDNF family receptor alpha 1 isoform b preproprotein...
GFRA1                 0.193   GDNF family receptor alpha 1 isoform a preproprotein ...
GFRA2                 0.183   GDNF family receptor alpha 2 preproprotein 
GFRA3                 0.133   GDNF family receptor alpha 3 preproprotein 
GFRAL                 0.053   GDNF family receptor alpha like 
KRTAP4-9              0.028   PREDICTED: keratin associated protein 4-9 
CASKIN1               0.028   CASK interacting protein 1 
LOC100291076          0.023   PREDICTED: hypothetical protein XP_002347846 
LOC100287104          0.023   PREDICTED: hypothetical protein XP_002343630 
FLJ36644              0.023   PREDICTED: hypothetical protein 
LOC646034             0.022   PREDICTED: hypothetical protein 
LOC100292837          0.022   PREDICTED: hypothetical protein 
LOC646034             0.022   PREDICTED: hypothetical protein 
LOC100290612          0.022   PREDICTED: hypothetical protein XP_002348127 
LOC646034             0.022   PREDICTED: hypothetical protein 
LOC100289357          0.022   PREDICTED: hypothetical protein XP_002342220 
PSD                   0.022   pleckstrin and Sec7 domain containing 
COL1A2                0.020   alpha 2 type I collagen 
FLJ10404              0.020   hypothetical protein LOC54540 
C17orf96              0.018   hypothetical protein LOC100170841 
SRRM1                 0.018   serine/arginine repetitive matrix 1 
LOC100292124          0.018   PREDICTED: hypothetical protein XP_002346387 
TAF4                  0.018   TBP-associated factor 4 
PELP1                 0.018   proline, glutamic acid and leucine rich protein 1 [...
SAMD1                 0.017   sterile alpha motif domain containing 1 
C1QL4                 0.017   complement component 1, q subcomponent-like 4 
FAM110A               0.017   hypothetical protein LOC83541 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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