LOC100287824 17411

Name: LOC100287824	Sequence: fasta or formatted (205aa)		NCBI GI: 239742880
Description: PREDICTED: hypothetical protein XP_002342669		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 21 3 C cysteine 1.5 3 1 D aspartate 2.9 6 1 E glutamate 5.9 12 2 F phenylalanine 2.0 4 1 G glycine 12.2 25 2 H histidine 4.4 9 1 I isoleucine 2.9 6 1 K lysine 3.9 8 1 L leucine 6.3 13 2 M methionine 0.5 1 1 N asparagine 2.4 5 1 P proline 10.7 22 2 Q glutamine 4.9 10 1 R arginine 5.9 12 2 S serine 11.2 23 4 T threonine 6.3 13 3 V valine 3.4 7 1 W tryptophan 1.5 3 1 Y tyrosine 1.0 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342669 COL5A3 0.032 collagen, type V, alpha 3 preproprotein TAF4 0.032 TBP-associated factor 4 SYN1 0.032 synapsin I isoform Ia SYN1 0.032 synapsin I isoform Ib LOC100131773 0.030 PREDICTED: similar to mCG116201 HSPG2 0.030 heparan sulfate proteoglycan 2 LOC728351 0.030 PREDICTED: hypothetical protein LOC728351 0.030 PREDICTED: hypothetical protein SOBP 0.030 sine oculis binding protein homolog GLCCI1 0.030 glucocorticoid induced transcript 1 SHANK1 0.030 SH3 and multiple ankyrin repeat domains 1 ATN1 0.027 atrophin-1 ATN1 0.027 atrophin-1 HS6ST3 0.025 PREDICTED: heparan sulfate 6-O-sulfotransferase 3 [... HS6ST3 0.025 heparan sulfate 6-O-sulfotransferase 3 KNDC1 0.025 kinase non-catalytic C-lobe domain (KIND) containin... LOC388906 0.025 PREDICTED: hypothetical protein LOC388906 0.025 PREDICTED: hypothetical protein LOC388906 0.025 PREDICTED: hypothetical protein LOC389333 0.025 hypothetical protein LOC389333 C17orf65 0.025 hypothetical protein LOC339201 LOC100293115 0.022 PREDICTED: hypothetical protein LOC100290693 0.022 PREDICTED: hypothetical protein XP_002346930 LOC100289070 0.022 PREDICTED: hypothetical protein XP_002342806 LOC100289070 0.022 PREDICTED: hypothetical protein TAF6 0.022 TBP-associated factor 6 isoform delta TAF6 0.022 TBP-associated factor 6 isoform gamma TAF6 0.022 TBP-associated factor 6 isoform alpha TAF6 0.022 TBP-associated factor 6 isoform alpha Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.