Guide to the Human Genome
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Search of human proteins with 239741982

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239741982 PREDICTED: hypothetical protein [Homo sapiens]
         (423 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239741982 PREDICTED: hypothetical protein [Homo sapiens]           874   0.0  
gi|239748084 PREDICTED: hypothetical protein [Homo sapiens]           868   0.0  
gi|239753576 PREDICTED: hypothetical protein [Homo sapiens]           865   0.0  
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]            46   6e-05
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]            46   6e-05
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]      45   1e-04
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]            44   3e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    44   4e-04
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ...    43   6e-04
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ...    43   6e-04
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]            42   0.001
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]                42   0.001
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]          40   0.005
gi|113426528 PREDICTED: similar to hCG2042536 [Homo sapiens]           39   0.007
gi|113426210 PREDICTED: similar to hCG2042536 [Homo sapiens]           39   0.007
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ...    39   0.007
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ...    39   0.007
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ...    39   0.007
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ...    39   0.009
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ...    39   0.009
gi|126352446 elastin isoform d precursor [Homo sapiens]                39   0.012
gi|126352322 elastin isoform c precursor [Homo sapiens]                39   0.012
gi|126352700 elastin isoform b precursor [Homo sapiens]                39   0.012
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     39   0.012
gi|169207782 PREDICTED: hypothetical protein [Homo sapiens]            38   0.015
gi|169207076 PREDICTED: hypothetical protein [Homo sapiens]            38   0.015
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]            38   0.015
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]            38   0.015
gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens]         38   0.015
gi|55749678 ninein-like [Homo sapiens]                                 38   0.020

>gi|239741982 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 423

 Score =  874 bits (2259), Expect = 0.0
 Identities = 423/423 (100%), Positives = 423/423 (100%)

Query: 1   MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT 60
           MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT
Sbjct: 1   MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT 60

Query: 61  EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS 120
           EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS
Sbjct: 61  EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS 120

Query: 121 AELAWRVSGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGN 180
           AELAWRVSGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGN
Sbjct: 121 AELAWRVSGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGN 180

Query: 181 VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA 240
           VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA
Sbjct: 181 VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA 240

Query: 241 EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA 300
           EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA
Sbjct: 241 EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA 300

Query: 301 AVPAAWEGTDRRRGRRRRRPSWRNGTEGSTEAGWLGTATLACSLPPHALLLPSEAARGTE 360
           AVPAAWEGTDRRRGRRRRRPSWRNGTEGSTEAGWLGTATLACSLPPHALLLPSEAARGTE
Sbjct: 301 AVPAAWEGTDRRRGRRRRRPSWRNGTEGSTEAGWLGTATLACSLPPHALLLPSEAARGTE 360

Query: 361 WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR 420
           WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR
Sbjct: 361 WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR 420

Query: 421 RSD 423
           RSD
Sbjct: 421 RSD 423


>gi|239748084 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 423

 Score =  868 bits (2242), Expect = 0.0
 Identities = 421/423 (99%), Positives = 422/423 (99%)

Query: 1   MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT 60
           MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT
Sbjct: 1   MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT 60

Query: 61  EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS 120
           EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS
Sbjct: 61  EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS 120

Query: 121 AELAWRVSGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGN 180
           AELAWRVSGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGN
Sbjct: 121 AELAWRVSGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGN 180

Query: 181 VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA 240
           VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA
Sbjct: 181 VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA 240

Query: 241 EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA 300
           EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA
Sbjct: 241 EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA 300

Query: 301 AVPAAWEGTDRRRGRRRRRPSWRNGTEGSTEAGWLGTATLACSLPPHALLLPSEAARGTE 360
           AVPAAWEGTDRRRGRRRRRPS RNGTEGST+AGWLGTATLACSLPPHALLLPSEAARGTE
Sbjct: 301 AVPAAWEGTDRRRGRRRRRPSGRNGTEGSTKAGWLGTATLACSLPPHALLLPSEAARGTE 360

Query: 361 WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR 420
           WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR
Sbjct: 361 WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR 420

Query: 421 RSD 423
           RSD
Sbjct: 421 RSD 423


>gi|239753576 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 423

 Score =  865 bits (2235), Expect = 0.0
 Identities = 420/423 (99%), Positives = 421/423 (99%)

Query: 1   MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT 60
           MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT
Sbjct: 1   MTASNLKEGSLVKILVCKVWTIAKLNTTLMWESLLTKYLHDEDNALSLGCQSLADGELCT 60

Query: 61  EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS 120
           EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS
Sbjct: 61  EEKIKTSDQVGSGLGSHPQGVHLVLHVRTFSLAQSKESPRALRLRIHSGGARCYYCGIVS 120

Query: 121 AELAWRVSGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGN 180
           AELAWRVSGGGSGTRLRQESPGVQGRP DGYAGGPGHGGQERIHACSLGAGRRCGGAGGN
Sbjct: 121 AELAWRVSGGGSGTRLRQESPGVQGRPPDGYAGGPGHGGQERIHACSLGAGRRCGGAGGN 180

Query: 181 VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA 240
           VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA
Sbjct: 181 VPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGA 240

Query: 241 EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA 300
           EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA
Sbjct: 241 EAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA 300

Query: 301 AVPAAWEGTDRRRGRRRRRPSWRNGTEGSTEAGWLGTATLACSLPPHALLLPSEAARGTE 360
           AVPAAWEGTDRRRGRRRRRPS RNGTEGST+AGWLGTATLACSLPPHALLLPSEAARGTE
Sbjct: 301 AVPAAWEGTDRRRGRRRRRPSGRNGTEGSTKAGWLGTATLACSLPPHALLLPSEAARGTE 360

Query: 361 WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR 420
           WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR
Sbjct: 361 WERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASRTHR 420

Query: 421 RSD 423
           RSD
Sbjct: 421 RSD 423


>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 308

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 67/224 (29%), Positives = 78/224 (34%), Gaps = 59/224 (26%)

Query: 140 SPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGSCA 199
           SPG  GR R   +G  G  G+ R  A +L A +R G A   VP                 
Sbjct: 97  SPGPLGR-RASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVP----------------- 138

Query: 200 LSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLP---PPPGC 256
             PAL     GP +       A P G     G      SGAE A     R+P    PPG 
Sbjct: 139 --PALRTFSPGPASP----PRASPGGR---PGSEARGRSGAECAR----RVPLHHGPPGA 185

Query: 257 GGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAP------------PPAAVP- 303
            G G+   R  QL           P RGP   G +G +R P            PP A P 
Sbjct: 186 SGVGSERDRKFQLHQ--------TPARGPPFPGISGMTRGPVVLSGVNRQHRWPPGASPS 237

Query: 304 -AAWEGTDRRRGRRRRRPSWRNGTEGSTEAGWLGTATLACSLPP 346
            +  E    R  R  RRP       G    G  G    ACS+ P
Sbjct: 238 RSLGEAGGERPARALRRPRAPGRAGG---GGPPGGGIPACSIGP 278


>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 308

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 67/224 (29%), Positives = 78/224 (34%), Gaps = 59/224 (26%)

Query: 140 SPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGSCA 199
           SPG  GR R   +G  G  G+ R  A +L A +R G A   VP                 
Sbjct: 97  SPGPLGR-RASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVP----------------- 138

Query: 200 LSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLP---PPPGC 256
             PAL     GP +       A P G     G      SGAE A     R+P    PPG 
Sbjct: 139 --PALRTFSPGPASP----PRASPGGR---PGSEARGRSGAECAR----RVPLHHGPPGA 185

Query: 257 GGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAP------------PPAAVP- 303
            G G+   R  QL           P RGP   G +G +R P            PP A P 
Sbjct: 186 SGVGSERDRKFQLHQ--------TPARGPPFPGISGMTRGPVVLSGVNRQHRWPPGASPS 237

Query: 304 -AAWEGTDRRRGRRRRRPSWRNGTEGSTEAGWLGTATLACSLPP 346
            +  E    R  R  RRP       G    G  G    ACS+ P
Sbjct: 238 RSLGEAGGERPARALRRPRAPGRAGG---GGPPGGGIPACSIGP 278


>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
          Length = 1073

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 60/189 (31%), Positives = 69/189 (36%), Gaps = 39/189 (20%)

Query: 141 PGVQGRPRD----GYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARG 196
           PG+QGRP +    G  G PG  GQE  H     AG    GA G           H  A G
Sbjct: 364 PGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNP--GAPG-----------HVGAPG 410

Query: 197 SCALSPALGLA--ENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPP 254
                 ++G       PG +  RG     AG     GPV   P G   A      LP PP
Sbjct: 411 PSGPPGSVGAPGLRGTPGKDGERGEKG-AAGEEGSPGPV--GPRGDPGAP----GLPGPP 463

Query: 255 GCGGSGARGLR-----PEQLWSHVQHARCPQPG----RGPDASGAAGRSRAPPPAAVPAA 305
           G G  G  GLR     P  L +         PG    RG    G AG    PP  + P  
Sbjct: 464 GKGKDGEPGLRGSPGLPGPLGTKGDRGAPGIPGSPGSRGDPGIGVAG----PPGPSGPPG 519

Query: 306 WEGTDRRRG 314
            +G+   RG
Sbjct: 520 DKGSPGSRG 528


>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 69/222 (31%), Positives = 75/222 (33%), Gaps = 64/222 (28%)

Query: 123 LAWRVSG--GGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHA----------CSLGA 170
           L WR     G +G R     P V      G    PG GG     A           S  A
Sbjct: 35  LFWRYQKTLGPAGARRGHSPPTVAPAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAA 94

Query: 171 GRRCGGAGGNVPVFFLINDAHAAARGSCAL---SPALGLAENGPGNEWYRGRPAHPAGAI 227
           GRR G AG             A  RG  A    SPA G A   P            AG  
Sbjct: 95  GRRAGPAGP---------PCRAPGRGRAAATRRSPAPGTARGSPAG-------VERAGGA 138

Query: 228 TLDGPVLDAPSGAEAATLAGVRLPPPPGCG----GSGARGLR-------PEQLWSHVQHA 276
           T       A S A   ++   RLPPP  CG    G+G+R LR       P    S  + A
Sbjct: 139 T-------AASSAGTRSVPARRLPPP--CGGTSLGAGSRALRRPGSAALPRSPSSSRRWA 189

Query: 277 RCPQPGR-GPDASG------------AAGRSRAPPPAAVPAA 305
             P PG   P A G            AA  S APPP AV  A
Sbjct: 190 AMPGPGAPRPGAPGTWPVGFAVAAPPAAAASVAPPPPAVAGA 231


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 47/164 (28%), Positives = 56/164 (34%), Gaps = 29/164 (17%)

Query: 147 PRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGSCALSPALGL 206
           P  G   GPG G          GA +   G+        L+N  HAAA       PA+ L
Sbjct: 176 PGPGPGPGPGPG-----KPAGPGAAQTLNGSAA------LLNSHHAAA-------PAVSL 217

Query: 207 AENGPGNEWYRGRPAHP---------AGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCG 257
             NGP       +PA P          GA     P   +P  A A        PPPP   
Sbjct: 218 VNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAP 277

Query: 258 GSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAA 301
            + AR   P         A    P       G+AG + AP PAA
Sbjct: 278 ATLAR--PPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAA 319



 Score = 33.5 bits (75), Expect = 0.37
 Identities = 27/89 (30%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 220 PAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCP 279
           P HPAG  T   P +  P+ A+    AG    P P  GG      +P         A   
Sbjct: 284 PGHPAGPPTA-APAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPG------PGAAAA 336

Query: 280 QPGRGPDASGAAGRSRAPPPAAVPAAWEG 308
            P  G  A       +A PPAA   A  G
Sbjct: 337 APAPGVKAESPKRVVQAAPPAAQTLAASG 365


>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
           sapiens]
          Length = 304

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 58/214 (27%), Positives = 73/214 (34%), Gaps = 34/214 (15%)

Query: 137 RQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGR-RCGGAGGNVPVFFLINDAHAAAR 195
           R   PG  G PR    GG G GG+     C+ G GR  C G+GG              AR
Sbjct: 80  RGAGPGAAG-PRAAGRGGAGGGGR----CCTRGRGRFPCAGSGGR------------GAR 122

Query: 196 GSCALSPALGLAENGPGNEW--YRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPP 253
                SP+   + +   + W   RGR A P  +  L   +   P  A         LP  
Sbjct: 123 SRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPA---------LPAA 173

Query: 254 PGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRR 313
              G     GL  ++    +  A     GR   AS        PP    P    G   R 
Sbjct: 174 LHIGARATAGLAAKRAQPQLCSAGTAARGRRTRASPPT-----PPRPRPPGLRSGDVPRG 228

Query: 314 GRRRRRPSWRNGTEGSTEAGWLGTATLACSLPPH 347
           G R  RP+ R G  G   A  +    L   +P H
Sbjct: 229 GARVERPTGRRGAGGRGGAQRIPPRPLRRLVPIH 262


>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
           sapiens]
          Length = 304

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 58/214 (27%), Positives = 73/214 (34%), Gaps = 34/214 (15%)

Query: 137 RQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGR-RCGGAGGNVPVFFLINDAHAAAR 195
           R   PG  G PR    GG G GG+     C+ G GR  C G+GG              AR
Sbjct: 80  RGAGPGAAG-PRAAGRGGAGGGGR----CCTRGRGRFPCAGSGGR------------GAR 122

Query: 196 GSCALSPALGLAENGPGNEW--YRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPP 253
                SP+   + +   + W   RGR A P  +  L   +   P  A         LP  
Sbjct: 123 SRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPA---------LPAA 173

Query: 254 PGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRR 313
              G     GL  ++    +  A     GR   AS        PP    P    G   R 
Sbjct: 174 LHIGARATAGLAAKRAQPQLCSAGTAARGRRTRASPPT-----PPRPRPPGLRSGDVPRG 228

Query: 314 GRRRRRPSWRNGTEGSTEAGWLGTATLACSLPPH 347
           G R  RP+ R G  G   A  +    L   +P H
Sbjct: 229 GARVERPTGRRGAGGRGGAQRIPPRPLRRLVPIH 262


>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 316

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 54/195 (27%), Positives = 67/195 (34%), Gaps = 34/195 (17%)

Query: 137 RQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGR-RCGGAGGNVPVFFLINDAHAAAR 195
           R   PG  G PR    GG G GG+     C+ G GR  C G+GG              AR
Sbjct: 80  RGAGPGAAG-PRAAGRGGAGGGGR----CCTRGRGRFPCAGSGGR------------GAR 122

Query: 196 GSCALSPALGLAENGPGNEW--YRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPP 253
                SP+   + +   + W   RGR A P  +  L   +   P  A         LP  
Sbjct: 123 SRGCHSPSCCRSSSCAWHRWPQLRGREADPRASPALLICIAPRPRPA---------LPAA 173

Query: 254 PGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRR 313
              G     GL  ++    +  A     GR   AS        PP    P    G   R 
Sbjct: 174 LHIGARATAGLAAKRAQPQLCSAGTAARGRRTRASPPT-----PPRPRPPGLRSGDVPRG 228

Query: 314 GRRRRRPSWRNGTEG 328
           G R  RP+ R G  G
Sbjct: 229 GARVERPTGRRGAGG 243


>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
          Length = 1626

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 45/131 (34%), Positives = 50/131 (38%), Gaps = 26/131 (19%)

Query: 141 PGVQGRPRD----GYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARG 196
           PG+QGRP +    G  G PG  GQE  H     AG    GA G           H  A G
Sbjct: 882 PGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNP--GAPG-----------HVGAPG 928

Query: 197 SCALSPALGLA--ENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPP 254
                 ++G       PG +  RG     AG     GPV   P G   A      LP PP
Sbjct: 929 PSGPPGSVGAPGLRGTPGKDGERGEKG-AAGEEGSPGPV--GPRGDPGAP----GLPGPP 981

Query: 255 GCGGSGARGLR 265
           G G  G  GLR
Sbjct: 982 GKGKDGEPGLR 992



 Score = 32.3 bits (72), Expect = 0.83
 Identities = 54/214 (25%), Positives = 68/214 (31%), Gaps = 47/214 (21%)

Query: 130 GGSGTRLRQESPGVQG-RPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLIN 188
           G  G R  + + G +G R  DG+ G PG  GQ+     S  AG + G  G   P      
Sbjct: 587 GLQGERGEKGTRGEKGERGLDGFPGKPGDTGQQGRPGPSGVAGPQ-GEKGDVGPA----- 640

Query: 189 DAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAAT---- 244
                  GS      L   +  PG   ++G P  P     +     D P G +       
Sbjct: 641 -GPPGVPGSVVQQEGLKGEQGAPGPRGHQGAPGPPGARGPIGPEGRDGPPGLQGLRGKKG 699

Query: 245 ---------LAGVRLPP-PPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRS 294
                    L G++ PP PPG  G                    P PG  P   G  G  
Sbjct: 700 DMGPPGIPGLLGLQGPPGPPGVPGP-------------------PGPGGSPGLPGEIGFP 740

Query: 295 RAPPPAAVPAAWEGTDRRRGRRRRRPSWRNGTEG 328
             P P   P    G D   G     P    GT+G
Sbjct: 741 GKPGPPG-PTGPPGKDGPNG-----PPGPPGTKG 768



 Score = 32.3 bits (72), Expect = 0.83
 Identities = 49/170 (28%), Positives = 57/170 (33%), Gaps = 48/170 (28%)

Query: 128  SGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLI 187
            S G  G R    +PG+ G P  G  G PG  G   +    LG    CG   G+       
Sbjct: 962  SPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLPG-PLGTKAACGKVRGS------- 1013

Query: 188  NDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAG 247
               + A  G C        A   PG+   RG P      I + GP    PSG        
Sbjct: 1014 --ENCALGGQCVKGDR--GAPGIPGSPGSRGDP-----GIGVAGP--PGPSG-------- 1054

Query: 248  VRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAP 297
                PP   G  G+RGL                PG  P   G AGR  AP
Sbjct: 1055 ----PPGDKGSPGSRGL----------------PG-FPGPQGPAGRDGAP 1083


>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
          Length = 1192

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 38/129 (29%), Positives = 50/129 (38%), Gaps = 16/129 (12%)

Query: 128 SGGGSGTRLRQESPGVQGRPR---DGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVF 184
           +GGG G   R   P  +G+PR      + G G        A + G G       G V   
Sbjct: 200 AGGGKGAGSRLSWPESEGKPRVKGSKSSAGTGASVSAAATAAAAGGGGSTASTSGGV--- 256

Query: 185 FLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAAT 244
                A A ARG   LSP  G ++    ++ + G PA     +TL       PS A A T
Sbjct: 257 ----GAGAGARGK--LSPRKGKSKTLDNSDLHPGPPAGSPPPLTLP----PTPSPATAVT 306

Query: 245 LAGVRLPPP 253
            A  + P P
Sbjct: 307 AASAQPPGP 315


>gi|113426528 PREDICTED: similar to hCG2042536 [Homo sapiens]
          Length = 847

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 69/267 (25%), Positives = 95/267 (35%), Gaps = 43/267 (16%)

Query: 161 ERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRP 220
           +R H C  GAG R GGAG   P  + +  A  +A G        G    G   E      
Sbjct: 116 KRPHQCDAGAGGRRGGAG--APREWNVAYALGSATGDDDEDDGGGPRLRGAAEETRDSDL 173

Query: 221 AHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQ 280
           +  +    L  P    P   +AA+      P   G  G G RG R ++ W   + A  P 
Sbjct: 174 SELSDTDPLSEP---DPPARDAAS------PHQDGAPGPGPRGGRGQE-W---RPAPGPA 220

Query: 281 PGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRRGRRRRR-------PSWRNGTEGSTEAG 333
           PG+G +AS          PA   A  +G  +   RRRR+       P  R     S +  
Sbjct: 221 PGQGAEASAQGRAEEEGLPAKAHA--DGEPKAGVRRRRKGVGRHWVPEARASVLRSIQDP 278

Query: 334 WLGTATLACSLPPHALLLPSEAARGTEWERTVGTEDRKRDAALLVG---RRDSD-----G 385
           W G         P     P++  +G    R   T + +     L G     DSD     G
Sbjct: 279 WQG---------PLVQEAPADGMKGPPSGRATKTLESRPLGETLRGFCTSEDSDINITSG 329

Query: 386 RTDQRTDWQPARVAALRAERSKARIPR 412
             D +   QP        E++  R+PR
Sbjct: 330 EEDHKE--QPFPGVCNPKEKNSGRVPR 354


>gi|113426210 PREDICTED: similar to hCG2042536 [Homo sapiens]
          Length = 847

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 69/267 (25%), Positives = 95/267 (35%), Gaps = 43/267 (16%)

Query: 161 ERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRP 220
           +R H C  GAG R GGAG   P  + +  A  +A G        G    G   E      
Sbjct: 116 KRPHQCDAGAGGRRGGAG--APREWNVAYALGSATGDDDEDDGGGPRLRGAAEETRDSDL 173

Query: 221 AHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQ 280
           +  +    L  P    P   +AA+      P   G  G G RG R ++ W   + A  P 
Sbjct: 174 SELSDTDPLSEP---DPPARDAAS------PHQDGAPGPGPRGGRGQE-W---RPAPGPA 220

Query: 281 PGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRRGRRRRR-------PSWRNGTEGSTEAG 333
           PG+G +AS          PA   A  +G  +   RRRR+       P  R     S +  
Sbjct: 221 PGQGAEASAQGRAEEEGLPAKAHA--DGEPKSGVRRRRKGVGRHWVPEARASVLRSIQDP 278

Query: 334 WLGTATLACSLPPHALLLPSEAARGTEWERTVGTEDRKRDAALLVG---RRDSD-----G 385
           W G         P     P++  +G    R   T + +     L G     DSD     G
Sbjct: 279 WQG---------PLVQEAPADGMKGPPSGRATKTLESRPLGETLRGFCTSEDSDINITSG 329

Query: 386 RTDQRTDWQPARVAALRAERSKARIPR 412
             D +   QP        E++  R+PR
Sbjct: 330 EEDHKE--QPFPGVCNPKEKNSGRVPR 354


>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
           [Homo sapiens]
          Length = 2191

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 51/221 (23%), Positives = 70/221 (31%), Gaps = 43/221 (19%)

Query: 129 GGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAG----GNVPVF 184
           GGG G        G  G    G   G G  G   + A +  A    GG G    G     
Sbjct: 255 GGGGG--------GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG 306

Query: 185 FLINDAHAAARGSCALSPALGLAEN---------GPGNEWYRGRPAHPAGAITLDGPVLD 235
           + +  +     G   + P  G A +           G + + G+  HP+GA      +L 
Sbjct: 307 YGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLT 366

Query: 236 APS------GAEAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASG 289
           +PS      G      +    PPPP           P Q  S    A     G+   A  
Sbjct: 367 SPSPMMRSYGGSYPEYSSPSAPPPP-----------PSQPQSQAAAAGAAAGGQQAAAGM 415

Query: 290 AAGRSRAPPPAAVPAAWEGTDRRRGRRRRRPSWRNGTEGST 330
             G+      AA   AW        ++R  P+   GT G T
Sbjct: 416 GLGKDMGAQYAAASPAWAA-----AQQRSHPAMSPGTPGPT 451


>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
           [Homo sapiens]
          Length = 2231

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 51/221 (23%), Positives = 70/221 (31%), Gaps = 43/221 (19%)

Query: 129 GGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAG----GNVPVF 184
           GGG G        G  G    G   G G  G   + A +  A    GG G    G     
Sbjct: 255 GGGGG--------GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG 306

Query: 185 FLINDAHAAARGSCALSPALGLAEN---------GPGNEWYRGRPAHPAGAITLDGPVLD 235
           + +  +     G   + P  G A +           G + + G+  HP+GA      +L 
Sbjct: 307 YGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLT 366

Query: 236 APS------GAEAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASG 289
           +PS      G      +    PPPP           P Q  S    A     G+   A  
Sbjct: 367 SPSPMMRSYGGSYPEYSSPSAPPPP-----------PSQPQSQAAAAGAAAGGQQAAAGM 415

Query: 290 AAGRSRAPPPAAVPAAWEGTDRRRGRRRRRPSWRNGTEGST 330
             G+      AA   AW        ++R  P+   GT G T
Sbjct: 416 GLGKDMGAQYAAASPAWAA-----AQQRSHPAMSPGTPGPT 451


>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
           [Homo sapiens]
          Length = 2178

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 51/221 (23%), Positives = 70/221 (31%), Gaps = 43/221 (19%)

Query: 129 GGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAG----GNVPVF 184
           GGG G        G  G    G   G G  G   + A +  A    GG G    G     
Sbjct: 255 GGGGG--------GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG 306

Query: 185 FLINDAHAAARGSCALSPALGLAEN---------GPGNEWYRGRPAHPAGAITLDGPVLD 235
           + +  +     G   + P  G A +           G + + G+  HP+GA      +L 
Sbjct: 307 YGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLT 366

Query: 236 APS------GAEAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDASG 289
           +PS      G      +    PPPP           P Q  S    A     G+   A  
Sbjct: 367 SPSPMMRSYGGSYPEYSSPSAPPPP-----------PSQPQSQAAAAGAAAGGQQAAAGM 415

Query: 290 AAGRSRAPPPAAVPAAWEGTDRRRGRRRRRPSWRNGTEGST 330
             G+      AA   AW        ++R  P+   GT G T
Sbjct: 416 GLGKDMGAQYAAASPAWAA-----AQQRSHPAMSPGTPGPT 451


>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
           sapiens]
          Length = 647

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 76/286 (26%), Positives = 103/286 (36%), Gaps = 28/286 (9%)

Query: 142 GVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPV----FFLINDAHAAARGS 197
           G  G  R     G G GG+ R  A +L    + G A   +P       L  D   A RG 
Sbjct: 136 GSHGGRRSCGREGQGRGGRRRRAADTLF---QLGPAWPALPAPAAGRALGTDEPLALRGQ 192

Query: 198 CALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCG 257
           C  +   G A+    N  +  R   PAG + L    L AP     A  AG       G  
Sbjct: 193 CGPAARRGCAQEQLRNAPWAPRAHSPAGRLALG---LIAP--RRGAGRAGA------GAA 241

Query: 258 GSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVP-AAWEGTDRRRGRR 316
             G RG     L   VQ A   +P   P        +  P  AA+P + + G  R RG  
Sbjct: 242 ACGRRGRIAAPLSGVVQKASYLRPKNLPRLLSMPSAAARPCGAALPRSGFSGRPRGRG-- 299

Query: 317 RRRPSWRNGTEGSTEAGWLGTATLACSLPPHALLLPSEAARGTEWERTVGTEDRKRDAAL 376
               +   G+ G   A  +G A      P     L +    G  W  T   E ++  A  
Sbjct: 300 --GAAAGRGSRGEHPACGVGLARGTAPQPASTWALAARPRAGGTW--TSRFEAQRGCAHQ 355

Query: 377 LVGRRDSDGRTDQRTDWQPARVAALRAERSK-ARIPRRAASRTHRR 421
              RR  DG  +  +  +PARV +    R +  R+PR +     +R
Sbjct: 356 DGQRRTRDGAGNHAS--EPARVWSPPPRRQRPRRLPRASLQEEPKR 399



 Score = 32.7 bits (73), Expect = 0.64
 Identities = 74/283 (26%), Positives = 95/283 (33%), Gaps = 69/283 (24%)

Query: 142 GVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGSCALS 201
           G  GRPR       G G +    AC +G  R      G  P          A+  + A  
Sbjct: 290 GFSGRPRGRGGAAAGRGSRGEHPACGVGLAR------GTAP--------QPASTWALAAR 335

Query: 202 PALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGA 261
           P  G        E  RG         T DG      +G  A+  A V  PPP        
Sbjct: 336 PRAGGTWTS-RFEAQRGCAHQDGQRRTRDG------AGNHASEPARVWSPPP-------- 380

Query: 262 RGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEG------TDRRRGR 315
           R  RP +L    + +   +P R P  +  +G   A P    PAAW G        R  GR
Sbjct: 381 RRQRPRRL---PRASLQEEPKRRPPCARPSG---AGPAREGPAAWPGGAPTPPHARPTGR 434

Query: 316 RR-RRPSWRNGTEGSTEAGWLGTATLACSLPPHALLLPSEAARGTEWERTVGTEDRKRDA 374
           R+   P  R    G   +GW            HA      +A G  W+   G+  R+R A
Sbjct: 435 RQDPEPGPRAPRGGPASSGW------------HA-----GSAAGRGWDPGGGSRARRRAA 477

Query: 375 ALLVGRRDSDGRTDQRTDWQPARVAALRAERSKARIPRRAASR 417
                     GR   R+         L + RS  R+ R AA R
Sbjct: 478 R---------GRGCLRSARSSPHARPLGSSRS-VRLLRSAAGR 510


>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
           sapiens]
          Length = 647

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 76/286 (26%), Positives = 103/286 (36%), Gaps = 28/286 (9%)

Query: 142 GVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPV----FFLINDAHAAARGS 197
           G  G  R     G G GG+ R  A +L    + G A   +P       L  D   A RG 
Sbjct: 136 GSHGGRRSCGREGQGRGGRRRRAADTLF---QLGPAWPALPAPAAGRALGTDEPLALRGQ 192

Query: 198 CALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCG 257
           C  +   G A+    N  +  R   PAG + L    L AP     A  AG       G  
Sbjct: 193 CGPAARRGCAQEQLRNAPWAPRAHSPAGRLALG---LIAP--RRGAGRAGA------GAA 241

Query: 258 GSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVP-AAWEGTDRRRGRR 316
             G RG     L   VQ A   +P   P        +  P  AA+P + + G  R RG  
Sbjct: 242 ACGRRGRIAAPLSGVVQKASYLRPKNLPRLLSMPSAAARPCGAALPRSGFSGRPRGRG-- 299

Query: 317 RRRPSWRNGTEGSTEAGWLGTATLACSLPPHALLLPSEAARGTEWERTVGTEDRKRDAAL 376
               +   G+ G   A  +G A      P     L +    G  W  T   E ++  A  
Sbjct: 300 --GAAAGRGSRGEHPACGVGLARGTAPQPASTWALAARPRAGGTW--TSRFEAQRGCAHQ 355

Query: 377 LVGRRDSDGRTDQRTDWQPARVAALRAERSK-ARIPRRAASRTHRR 421
              RR  DG  +  +  +PARV +    R +  R+PR +     +R
Sbjct: 356 DGQRRTRDGAGNHAS--EPARVWSPPPRRQRPRRLPRASLQEEPKR 399



 Score = 32.3 bits (72), Expect = 0.83
 Identities = 63/240 (26%), Positives = 81/240 (33%), Gaps = 59/240 (24%)

Query: 142 GVQGRPRDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGSCALS 201
           G  GRPR       G G +    AC +G  R      G  P          A+  + A  
Sbjct: 290 GFSGRPRGRGGAAAGRGSRGEHPACGVGLAR------GTAP--------QPASTWALAAR 335

Query: 202 PALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGA 261
           P  G        E  RG         T DG      +G  A+  A V  PPP        
Sbjct: 336 PRAGGTWTS-RFEAQRGCAHQDGQRRTRDG------AGNHASEPARVWSPPP-------- 380

Query: 262 RGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEG------TDRRRGR 315
           R  RP +L    + +   +P R P  +  +G   A P    PAAW G        R  GR
Sbjct: 381 RRQRPRRL---PRASLQEEPKRRPPCARPSG---AGPAREGPAAWPGGAPTPPHARPTGR 434

Query: 316 RR-RRPSWRNGTEGSTEAGWLGTATLACSLPPHALLLPSEAARGTEWERTVGTEDRKRDA 374
           R+   P  R    G   +GW            HA      +A G  W+   G+  R+R A
Sbjct: 435 RQDPEPGPRAPRGGPASSGW------------HA-----GSAAGRGWDPGGGSRARRRAA 477


>gi|126352446 elastin isoform d precursor [Homo sapiens]
          Length = 711

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 50/166 (30%), Positives = 57/166 (34%), Gaps = 32/166 (19%)

Query: 152 AGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGS---CALSPALGLAE 208
           AG PG G    +    +GAG    G G  VP F  +  A AAA+ +    A+   LG   
Sbjct: 553 AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG--- 609

Query: 209 NGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGARGLRPEQ 268
            G G     G P    GA    GP   A +   AA  A   L    G GG G  GL    
Sbjct: 610 -GLGALGGVGIPGGVVGA----GPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL---- 660

Query: 269 LWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRRG 314
                               G  G    PP AA  AA  G   R G
Sbjct: 661 -----------------GVPGVGGLGGIPPAAAAKAAKYGVAARPG 689


>gi|126352322 elastin isoform c precursor [Homo sapiens]
          Length = 692

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 50/166 (30%), Positives = 57/166 (34%), Gaps = 32/166 (19%)

Query: 152 AGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGS---CALSPALGLAE 208
           AG PG G    +    +GAG    G G  VP F  +  A AAA+ +    A+   LG   
Sbjct: 534 AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG--- 590

Query: 209 NGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGARGLRPEQ 268
            G G     G P    GA    GP   A +   AA  A   L    G GG G  GL    
Sbjct: 591 -GLGALGGVGIPGGVVGA----GPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL---- 641

Query: 269 LWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRRG 314
                               G  G    PP AA  AA  G   R G
Sbjct: 642 -----------------GVPGVGGLGGIPPAAAAKAAKYGVAARPG 670


>gi|126352700 elastin isoform b precursor [Homo sapiens]
          Length = 677

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 50/166 (30%), Positives = 57/166 (34%), Gaps = 32/166 (19%)

Query: 152 AGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAARGS---CALSPALGLAE 208
           AG PG G    +    +GAG    G G  VP F  +  A AAA+ +    A+   LG   
Sbjct: 519 AGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG--- 575

Query: 209 NGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGARGLRPEQ 268
            G G     G P    GA    GP   A +   AA  A   L    G GG G  GL    
Sbjct: 576 -GLGALGGVGIPGGVVGA----GPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL---- 626

Query: 269 LWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRRG 314
                               G  G    PP AA  AA  G   R G
Sbjct: 627 -----------------GVPGVGGLGGIPPAAAAKAAKYGVAARPG 655


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 32/93 (34%), Positives = 34/93 (36%), Gaps = 14/93 (15%)

Query: 217 RGRPAHPAGAITLDGPV---------LDAPSGAEAATLAGVRLPPPPGCGGSGARGLRPE 267
           RG PA  A A     P            AP+ A  A  A    PP PG    G R  R  
Sbjct: 116 RGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAA 175

Query: 268 QLWSHVQHARCPQPGRGPDASGAAGRSRAPPPA 300
            L      A  P P   P  +  AG  RAPPPA
Sbjct: 176 PL-----AAPPPAPAAPPAVAPPAGPRRAPPPA 203


>gi|169207782 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 330

 Score = 38.1 bits (87), Expect = 0.015
 Identities = 72/248 (29%), Positives = 87/248 (35%), Gaps = 20/248 (8%)

Query: 170 AGRRCGGAGGNVPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITL 229
           A  R GG+ G  P             GS       G  ++  G     G P  P G+   
Sbjct: 89  ATSRLGGSRGPHPTL------PPGPAGSLVFPERRGSLQDRLGRASRPGCPPSPRGSRQE 142

Query: 230 DGPVLDAPSGAEAATLAGVRLPPPPGCGG---SGARGLRPEQLWSHVQHAR-CPQPGRGP 285
            G      SGA     A      P    G    GARG  P         AR   QPGR P
Sbjct: 143 RGANSPGRSGARGCGGAAALQQEPTNFRGRPRPGARGTDPPGRTLPAPLARPSTQPGRRP 202

Query: 286 DASGAA---GRSRAPPPAAVPAAWEGTDRRR-GR--RRRRPSWRNGTEGSTEAGWLGTAT 339
               AA   G   A    A PA   G DR R GR  RRR P    G      AG    AT
Sbjct: 203 GLGRAASPLGPRGAGVTGAGPATQGGRDRGRWGRWVRRRVPCPLPGLRPHERAGAALLAT 262

Query: 340 LACSLP-PHALL--LPSEAARGTEWERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPA 396
              + P P A L  L S+  +  +     G E R+   + ++ R D   R  +    +P 
Sbjct: 263 CRGNAPTPSACLTWLESKNKKNYDAGEACGGEKRRFHVSPVL-RPDRTPRAFRALSQRPP 321

Query: 397 RVAALRAE 404
           RV  L+ E
Sbjct: 322 RVPELQQE 329


>gi|169207076 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 330

 Score = 38.1 bits (87), Expect = 0.015
 Identities = 72/248 (29%), Positives = 87/248 (35%), Gaps = 20/248 (8%)

Query: 170 AGRRCGGAGGNVPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITL 229
           A  R GG+ G  P             GS       G  ++  G     G P  P G+   
Sbjct: 89  ATSRLGGSRGPHPTL------PPGPAGSLVFPERRGSLQDRLGRASRPGCPPSPRGSRQE 142

Query: 230 DGPVLDAPSGAEAATLAGVRLPPPPGCGG---SGARGLRPEQLWSHVQHAR-CPQPGRGP 285
            G      SGA     A      P    G    GARG  P         AR   QPGR P
Sbjct: 143 RGANSPGRSGARGCGGAAALQQEPTNFRGRPRPGARGTDPPGRTLPAPLARPSTQPGRRP 202

Query: 286 DASGAA---GRSRAPPPAAVPAAWEGTDRRR-GR--RRRRPSWRNGTEGSTEAGWLGTAT 339
               AA   G   A    A PA   G DR R GR  RRR P    G      AG    AT
Sbjct: 203 GLGRAASPLGPRGAGVTGAGPATQGGRDRGRWGRWVRRRVPCPLPGLRPHERAGAALLAT 262

Query: 340 LACSLP-PHALL--LPSEAARGTEWERTVGTEDRKRDAALLVGRRDSDGRTDQRTDWQPA 396
              + P P A L  L S+  +  +     G E R+   + ++ R D   R  +    +P 
Sbjct: 263 CRGNAPTPSACLTWLESKNKKNYDAGEACGGEKRRFHVSPVL-RPDRTPRAFRALSQRPP 321

Query: 397 RVAALRAE 404
           RV  L+ E
Sbjct: 322 RVPELQQE 329


>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 837

 Score = 38.1 bits (87), Expect = 0.015
 Identities = 82/337 (24%), Positives = 115/337 (34%), Gaps = 58/337 (17%)

Query: 128 SGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQ------ERIHACSLGAGRRCGGAGGNV 181
           +GG     L+ E  G     R G+A G    G       E++    +GAG R G  G   
Sbjct: 484 AGGRGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACG--- 540

Query: 182 PVFFLINDAHAAARGS--CALSPALGLAEN--GPGNEWYRGRPAHPAGA---ITLDGPVL 234
           P    I       R      L+ ALG  +   G G       PA  A A   I   G  L
Sbjct: 541 PHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDL 600

Query: 235 DAPSGAEAATLAGVRLPPPPGCGGSGA---RGLRPEQLWSHVQHARCPQPGRG------- 284
           D P              P  G GG G+   +G  P    S  + +R P   R        
Sbjct: 601 DGPRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPR 660

Query: 285 PDASGAAGRSRAPPPAAVPAAWEGT-------------DRRRGRRRRRPSWRNGTEGSTE 331
           P ++ +AG   +P P     + +G              DRR  RR    SWR     S  
Sbjct: 661 PASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRP----SAR 716

Query: 332 AGWLGTATLACSLPPHALLLPSEAARGTEWERTVGTEDRKRDAALLVGRRDSDGRTDQRT 391
           A W+ + T      P      S  ARG+   ++ G    +   +L    RD +       
Sbjct: 717 ASWVRSTT------PRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSRDDEPLAGAPE 770

Query: 392 DWQPARVAALRAER---------SKARIPRRAASRTH 419
           +W P  +++ RA R          +  +  RAA+  H
Sbjct: 771 EWPPPGLSSRRAPRFLIKSSPAPGRRALAARAANHAH 807


>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 837

 Score = 38.1 bits (87), Expect = 0.015
 Identities = 82/337 (24%), Positives = 115/337 (34%), Gaps = 58/337 (17%)

Query: 128 SGGGSGTRLRQESPGVQGRPRDGYAGGPGHGGQ------ERIHACSLGAGRRCGGAGGNV 181
           +GG     L+ E  G     R G+A G    G       E++    +GAG R G  G   
Sbjct: 484 AGGRGAPGLQAEELGGLLGCRTGWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACG--- 540

Query: 182 PVFFLINDAHAAARGS--CALSPALGLAEN--GPGNEWYRGRPAHPAGA---ITLDGPVL 234
           P    I       R      L+ ALG  +   G G       PA  A A   I   G  L
Sbjct: 541 PHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDL 600

Query: 235 DAPSGAEAATLAGVRLPPPPGCGGSGA---RGLRPEQLWSHVQHARCPQPGRG------- 284
           D P              P  G GG G+   +G  P    S  + +R P   R        
Sbjct: 601 DGPRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPR 660

Query: 285 PDASGAAGRSRAPPPAAVPAAWEGT-------------DRRRGRRRRRPSWRNGTEGSTE 331
           P ++ +AG   +P P     + +G              DRR  RR    SWR     S  
Sbjct: 661 PASATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRP----SAR 716

Query: 332 AGWLGTATLACSLPPHALLLPSEAARGTEWERTVGTEDRKRDAALLVGRRDSDGRTDQRT 391
           A W+ + T      P      S  ARG+   ++ G    +   +L    RD +       
Sbjct: 717 ASWVRSTT------PRGPEASSPRARGSFLPKSGGGSPPRPARSLAGPSRDDEPLAGAPE 770

Query: 392 DWQPARVAALRAER---------SKARIPRRAASRTH 419
           +W P  +++ RA R          +  +  RAA+  H
Sbjct: 771 EWPPPGLSSRRAPRFLIKSSPAPGRRALAARAANHAH 807


>gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens]
          Length = 1142

 Score = 38.1 bits (87), Expect = 0.015
 Identities = 52/173 (30%), Positives = 62/173 (35%), Gaps = 43/173 (24%)

Query: 140 SPGVQGRPRD----GYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAAAR 195
           S GV+G P D    G  G PG  GQ+             G AG   P             
Sbjct: 502 SQGVKGEPGDPGPPGLIGSPGLKGQQ-------------GSAGSMGP---------RGPP 539

Query: 196 GSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPPPG 255
           G   L    G+    PG +  +G    P G I    P L  P G   A   G  LP  PG
Sbjct: 540 GDVGLPGEHGI----PGKQGIKGEKGDPGGII--GPPGLPGPKGE--AGPPGKSLPGEPG 591

Query: 256 CGGS----GARGLRPEQLWSHVQHARCPQPGR-GPDASGAAGRSRAPPPAAVP 303
             G+    G RG + E+    V  +    PG  GP   G  GR+ A  PA  P
Sbjct: 592 LDGNPGAPGPRGPKGERGLPGVHGS----PGDIGPQGIGIPGRTGAQGPAGEP 640



 Score = 31.2 bits (69), Expect = 1.9
 Identities = 44/175 (25%), Positives = 57/175 (32%), Gaps = 22/175 (12%)

Query: 141 PGVQGRP-------RDGYAGGPGHGGQERIHACSLGAGRRCGGAGGNVPVFFLINDAHAA 193
           PG+ GR          GY G PG  G E +     G     G  G   P   +    H  
Sbjct: 737 PGIPGREGPKGSKGERGYPGIPGEKGDEGLQ----GIPGIPGAPGPTGPPGLMGRTGHPG 792

Query: 194 ARGSCALSPALGLAENGPGNEWYRGRPAHPAGAITLDGPVLDAPSGAEAATLAGVRLPPP 253
             G+     + G     PG     G P  P         +     G    +  G   PP 
Sbjct: 793 PTGAKGEKGSDG----PPGKPGPPGPPGIPFNERNGMSSLYKIKGGVNVPSYPGPPGPPG 848

Query: 254 PG-----CGGSGARGLRPEQLWSHVQHARCPQPGRGPDASGAAGRSRAPPPAAVP 303
           P       G  GA GL   + +  V+  R   P   P  +G +G+  AP P  VP
Sbjct: 849 PKGDPGPVGEPGAMGLPGLEGFPGVKGDR--GPAGPPGIAGMSGKPGAPGPPGVP 901


>gi|55749678 ninein-like [Homo sapiens]
          Length = 1382

 Score = 37.7 bits (86), Expect = 0.020
 Identities = 71/281 (25%), Positives = 94/281 (33%), Gaps = 60/281 (21%)

Query: 72  SGLGSHPQGVHLVLHV---------RTFSLAQSKESPRALRLRIHSGGARCYYC---GIV 119
           SGLG+ P    L L +         R    ++  E  RAL+L+  +   R   C    + 
Sbjct: 746 SGLGALPARRDLTLELEEPPQGPLPRGSQRSEQLELERALKLQPCASEKRAQMCVSLALE 805

Query: 120 SAELAWRVSGGGSGTRLRQESPGVQGRPRDGYAGGPGHG------------GQERIHACS 167
             EL         G  L  E   +Q  P+DG   G G              G+  +   +
Sbjct: 806 EEELELARGKRVDGPSLEAE---MQALPKDGLVAGSGQEGTRGLLPLRPGCGERPLAWLA 862

Query: 168 LGAGRRCGGAGGNVPVFFLINDAHAAARGSCALSPALGLAENGPGNEWYRGRPAHPAGAI 227
            G GR    A G  P      D  A      + +PA   A +GP   W R +P    G I
Sbjct: 863 PGDGRESEEAAGAGPRRRQAQDTEATQ----SPAPAPAPASHGPSERWSRMQPCGVDGDI 918

Query: 228 TLDGPVLDAPSGAEAATLAGVRLPPPPGCGGSGARGLRPEQLWSHVQHARCPQPGRGPDA 287
               P    P GA A   AG+  P        GAR L              P  G   DA
Sbjct: 919 V---PKEPEPFGASA---AGLEQP--------GAREL--------------PLLGTERDA 950

Query: 288 SGAAGRSRAPPPAAVPAAWEGTDRRRG-RRRRRPSWRNGTE 327
           S    R   PP     +     +R +  +  R  SW  GT+
Sbjct: 951 SQTQPRMWEPPLRPAASCRGQAERLQAIQEERARSWSRGTQ 991


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,105,405
Number of Sequences: 37866
Number of extensions: 1305738
Number of successful extensions: 6874
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 445
Number of HSP's that attempted gapping in prelim test: 6125
Number of HSP's gapped (non-prelim): 1073
length of query: 423
length of database: 18,247,518
effective HSP length: 105
effective length of query: 318
effective length of database: 14,271,588
effective search space: 4538364984
effective search space used: 4538364984
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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