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Search of human proteins with 239741939
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741939 PREDICTED: hypothetical protein XP_002342358 [Homo
sapiens]
(389 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239741939 PREDICTED: hypothetical protein XP_002342358 [Homo ... 820 0.0
gi|239753480 PREDICTED: hypothetical protein [Homo sapiens] 516 e-146
gi|239742226 PREDICTED: hypothetical protein [Homo sapiens] 290 1e-78
gi|239753760 PREDICTED: hypothetical protein, partial [Homo sapi... 263 2e-70
gi|239754902 PREDICTED: hypothetical protein [Homo sapiens] 191 1e-48
gi|239749442 PREDICTED: hypothetical protein XP_002347044 [Homo ... 179 4e-45
gi|169172282 PREDICTED: similar to hCG1818014 [Homo sapiens] 83 4e-16
gi|116284392 mucin 2 precursor [Homo sapiens] 65 1e-10
gi|41281612 zinc finger protein 828 [Homo sapiens] 56 5e-08
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 1e-07
gi|55750053 atrophin-1 [Homo sapiens] 52 7e-07
gi|55750041 atrophin-1 [Homo sapiens] 52 7e-07
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 51 2e-06
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 51 2e-06
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 50 3e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 50 5e-06
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 48 2e-05
gi|18079216 CASK interacting protein 1 [Homo sapiens] 47 2e-05
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 47 2e-05
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 46 7e-05
gi|38787970 tensin like C1 domain containing phosphatase isoform... 46 7e-05
gi|38787957 tensin like C1 domain containing phosphatase isoform... 46 7e-05
gi|38787941 tensin like C1 domain containing phosphatase isoform... 46 7e-05
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 46 7e-05
gi|117938768 GNAS complex locus alex [Homo sapiens] 45 9e-05
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 45 1e-04
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 45 1e-04
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 45 1e-04
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 45 1e-04
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 44 2e-04
>gi|239741939 PREDICTED: hypothetical protein XP_002342358 [Homo
sapiens]
Length = 389
Score = 820 bits (2119), Expect = 0.0
Identities = 389/389 (100%), Positives = 389/389 (100%)
Query: 1 MRFHPRNLTMDTLVIKGLVSPQDTVRDQRPHHPSSGAGPAGTGSFCDTCCITSLCEWIQL 60
MRFHPRNLTMDTLVIKGLVSPQDTVRDQRPHHPSSGAGPAGTGSFCDTCCITSLCEWIQL
Sbjct: 1 MRFHPRNLTMDTLVIKGLVSPQDTVRDQRPHHPSSGAGPAGTGSFCDTCCITSLCEWIQL 60
Query: 61 PELTDSSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAA 120
PELTDSSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAA
Sbjct: 61 PELTDSSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAA 120
Query: 121 PPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGL 180
PPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGL
Sbjct: 121 PPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGL 180
Query: 181 QLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSC 240
QLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSC
Sbjct: 181 QLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSC 240
Query: 241 TPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLPS 300
TPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLPS
Sbjct: 241 TPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLPS 300
Query: 301 PQTGTSALPRVSSCRTLKLEHQLSPGSPAARSTTLTEEQPHQLLHCLQLHNLRHQWQHQL 360
PQTGTSALPRVSSCRTLKLEHQLSPGSPAARSTTLTEEQPHQLLHCLQLHNLRHQWQHQL
Sbjct: 301 PQTGTSALPRVSSCRTLKLEHQLSPGSPAARSTTLTEEQPHQLLHCLQLHNLRHQWQHQL 360
Query: 361 LRGRPAQRLSDLKGSIGPSPRLQLHHPQV 389
LRGRPAQRLSDLKGSIGPSPRLQLHHPQV
Sbjct: 361 LRGRPAQRLSDLKGSIGPSPRLQLHHPQV 389
>gi|239753480 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1344
Score = 516 bits (1328), Expect = e-146
Identities = 257/285 (90%), Positives = 259/285 (90%), Gaps = 21/285 (7%)
Query: 66 SSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNC 125
SSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNC
Sbjct: 983 SSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNC 1042
Query: 126 NISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSP 185
NISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSP
Sbjct: 1043 NISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSP 1102
Query: 186 KTET------VSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSS 239
KTET VSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSS
Sbjct: 1103 KTETNISSLQVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSS 1162
Query: 240 CTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPA-------------LLPGSPASRPSNWI 286
CT PSNWNISSP+GLQLHDPQT TSA P + LLPGSPASRPSNWI
Sbjct: 1163 CT--PSNWNISSPEGLQLHDPQTRTSALPRVSSCTALKLEHQLPLRLLPGSPASRPSNWI 1220
Query: 287 ISFPALKLEHQLPSPQTGTSALPRVSSCRTLKLEHQLSPGSPAAR 331
ISFPALKLEHQLPSPQTGTSALPRVSSCRTLKLEHQLSPGSPAAR
Sbjct: 1221 ISFPALKLEHQLPSPQTGTSALPRVSSCRTLKLEHQLSPGSPAAR 1265
Score = 113 bits (282), Expect = 3e-25
Identities = 81/199 (40%), Positives = 94/199 (47%), Gaps = 29/199 (14%)
Query: 29 RPHHPSSGAGPAGTGSFCDTCCITSLCEWIQLPELTDSSPGLQLHDPQSGTSAPPPGLQL 88
+P H PA S C+ SSP + P + + P GLQL
Sbjct: 1136 KPEHQLPPGSPAAWPSSCNI-----------------SSPPVSSCTPSNWNISSPEGLQL 1178
Query: 89 HDPQTGTSAPPRVSSCTTRKLEHQPH----SGSPAAPPSNCNISSPP---GLQLHDPQTR 141
HDPQT TSA PRVSSCT KLEHQ GSPA+ PSN IS P QL PQT
Sbjct: 1179 HDPQTRTSALPRVSSCTALKLEHQLPLRLLPGSPASRPSNWIISFPALKLEHQLPSPQTG 1238
Query: 142 TSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQ-----LHSPKTETVSSCKAL 196
TSA PRVSSC+ LKLEHQL GSPA R + + S G + + SP V+ C +
Sbjct: 1239 TSALPRVSSCRTLKLEHQLSPGSPAARKAGAVSYSCGGSEKLRPNIKSPTARNVNLCVST 1298
Query: 197 KRQHQLPPRVSSCTTLKPE 215
T LK E
Sbjct: 1299 LESFATASLAGPWTALKSE 1317
>gi|239742226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 303
Score = 290 bits (743), Expect = 1e-78
Identities = 176/315 (55%), Positives = 186/315 (59%), Gaps = 66/315 (20%)
Query: 69 GLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNIS 128
GLQL PQ+GTSAPPP LQLH PQTGTSAP RVS CT KLEH+ +GSPAA PSN NIS
Sbjct: 2 GLQLQGPQTGTSAPPPDLQLHGPQTGTSAPRRVSRCTACKLEHELPAGSPAAWPSNWNIS 61
Query: 129 SPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTE 188
SPP QLHDPQT SAPPR S C AL L+HQLP GSPA R SN I SPQGLQLH +T
Sbjct: 62 SPPDRQLHDPQTGISAPPRGSRCTALNLQHQLPTGSPAARLSNRNICSPQGLQLHGSQTG 121
Query: 189 TVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWN 248
T + P RVSSCT L +H LP SP A PS+CNISSP VSS T S WN
Sbjct: 122 TSA-----------PHRVSSCTVLNLQHWLPTRSPDARPSNCNISSPRVSSYTA--STWN 168
Query: 249 ISSPQGLQLHDPQTGTSAP----------------------------PG----------- 269
ISSP GLQLH PQT T AP PG
Sbjct: 169 ISSPPGLQLHGPQTATLAPHRVSRCTALKLEHQLPTGYTAAWPCSWRPGWEPMFQFGSHA 228
Query: 270 ----------SPALLPGSPASRPSNWIISFPALKLEHQLPS----PQTGTSALPRVSSCR 315
S LPGSP +RPSNW IS PALK EHQLP+ Q TSA PRV SC
Sbjct: 229 AGGTAGSRCSSLMFLPGSPGARPSNWNISSPALKPEHQLPAGSPPAQPSTSAPPRVLSCT 288
Query: 316 TLKLEHQLSPGSPAA 330
TLKLEHQL P S AA
Sbjct: 289 TLKLEHQLLPKSSAA 303
Score = 93.2 bits (230), Expect = 4e-19
Identities = 72/203 (35%), Positives = 86/203 (42%), Gaps = 54/203 (26%)
Query: 48 TCCITSLCEWI--QLPELTDS-----SPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPR 100
+C + +L W+ + P+ S SP + + + + PPGLQLH PQT T AP R
Sbjct: 130 SCTVLNLQHWLPTRSPDARPSNCNISSPRVSSYTASTWNISSPPGLQLHGPQTATLAPHR 189
Query: 101 VSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVS----------- 149
VS CT KLEHQ +G AA P + P Q +A R S
Sbjct: 190 VSRCTALKLEHQLPTGYTAAWPCSWRPGWEPMFQFGSHAAGGTAGSRCSSLMFLPGSPGA 249
Query: 150 -------SCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSCKALKRQHQL 202
S ALK EHQLPAGSP +PS
Sbjct: 250 RPSNWNISSPALKPEHQLPAGSPPAQPST-----------------------------SA 280
Query: 203 PPRVSSCTTLKPEHQLPPGSPAA 225
PPRV SCTTLK EHQL P S AA
Sbjct: 281 PPRVLSCTTLKLEHQLLPKSSAA 303
Score = 65.9 bits (159), Expect = 6e-11
Identities = 60/150 (40%), Positives = 65/150 (43%), Gaps = 47/150 (31%)
Query: 254 GLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLPSPQTGTSALPRVSS 313
GLQL PQTGTSAPP P L QL PQTGTSA RVS
Sbjct: 2 GLQLQGPQTGTSAPP---------------------PDL----QLHGPQTGTSAPRRVSR 36
Query: 314 CRTLKLEHQLSPGSPAA-RSTTLTEEQPHQLLH--------------CLQLHNLRHQWQH 358
C KLEH+L GSPAA S P + LH C L+ QH
Sbjct: 37 CTACKLEHELPAGSPAAWPSNWNISSPPDRQLHDPQTGISAPPRGSRCTALN-----LQH 91
Query: 359 QLLRGRPAQRLSDLKGSIGPSPRLQLHHPQ 388
QL G PA RLS+ +I LQLH Q
Sbjct: 92 QLPTGSPAARLSN--RNICSPQGLQLHGSQ 119
>gi|239753760 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 267
Score = 263 bits (673), Expect = 2e-70
Identities = 159/287 (55%), Positives = 171/287 (59%), Gaps = 44/287 (15%)
Query: 69 GLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNIS 128
GLQL PQ+GTSAPPP LQLH PQTGTSAP RVS CT KLEH+ +GSPAA PSN NIS
Sbjct: 2 GLQLQGPQTGTSAPPPDLQLHGPQTGTSAPRRVSRCTACKLEHELPAGSPAAWPSNWNIS 61
Query: 129 SPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTE 188
SPP QLHDPQT SAPPR S C AL L+HQLP GSPA R SN I SPQGLQLH +T
Sbjct: 62 SPPDRQLHDPQTGISAPPRGSRCTALNLQHQLPTGSPAARLSNRNICSPQGLQLHGSQTG 121
Query: 189 TVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWN 248
T + P RVSSCT L +H LP SP A PS+CNISSP VSS T S WN
Sbjct: 122 TSA-----------PHRVSSCTVLNLQHWLPTRSPDARPSNCNISSPRVSSYTA--STWN 168
Query: 249 ISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLPS-------P 301
ISSP GLQLH PQT T AP + + ALKLEHQLP+ P
Sbjct: 169 ISSPPGLQLHGPQTATLAP----------------HRVSRCTALKLEHQLPTGYTAAWLP 212
Query: 302 QTGTSALPR--------VSSCRTLKLEHQLSPGSPAARSTTLTEEQP 340
A P VSSC LKLEHQL SP AR + P
Sbjct: 213 AGSPGARPSNCNISSCWVSSCTALKLEHQLPARSPGARPSNWNISSP 259
Score = 201 bits (512), Expect = 7e-52
Identities = 127/262 (48%), Positives = 136/262 (51%), Gaps = 80/262 (30%)
Query: 68 PGLQLHDPQSGTSAP-------------------------------PPGLQLHDPQTGTS 96
P LQLH PQ+GTSAP PP QLHDPQTG S
Sbjct: 17 PDLQLHGPQTGTSAPRRVSRCTACKLEHELPAGSPAAWPSNWNISSPPDRQLHDPQTGIS 76
Query: 97 APPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKL 156
APPR S CT L+HQ +GSPAA SN NI SP GLQLH QT TSAP RVSSC L L
Sbjct: 77 APPRGSRCTALNLQHQLPTGSPAARLSNRNICSPQGLQLHGSQTGTSAPHRVSSCTVLNL 136
Query: 157 EHQLPAGSPAGRPSN---------------WIISSPQGLQLHSPKTETVSSCKALKRQHQ 201
+H LP SP RPSN W ISSP GLQLH P+T T++
Sbjct: 137 QHWLPTRSPDARPSNCNISSPRVSSYTASTWNISSPPGLQLHGPQTATLA---------- 186
Query: 202 LPPRVSSCTTLKPEHQLPPGSPAAW---------PSSCNISSPPVSSCT----------- 241
P RVS CT LK EHQLP G AAW PS+CNISS VSSCT
Sbjct: 187 -PHRVSRCTALKLEHQLPTGYTAAWLPAGSPGARPSNCNISSCWVSSCTALKLEHQLPAR 245
Query: 242 ---PQPSNWNISSPQGLQLHDP 260
+PSNWNISSP GLQ H P
Sbjct: 246 SPGARPSNWNISSPLGLQEHGP 267
Score = 131 bits (330), Expect = 9e-31
Identities = 97/251 (38%), Positives = 105/251 (41%), Gaps = 93/251 (37%)
Query: 27 DQRPHHPSSGAGPAGTGSFCDTCCIT------SLCEWIQLPELTDSSPGLQLHDPQSGTS 80
D + H P +G S C C + S W ++ S P QLHDPQ+G S
Sbjct: 18 DLQLHGPQTGTSAPRRVSRCTACKLEHELPAGSPAAWPSNWNIS-SPPDRQLHDPQTGIS 76
Query: 81 APP-------------------------------PGLQLHDPQTGTSAPPRVSSCTTRKL 109
APP GLQLH QTGTSAP RVSSCT L
Sbjct: 77 APPRGSRCTALNLQHQLPTGSPAARLSNRNICSPQGLQLHGSQTGTSAPHRVSSCTVLNL 136
Query: 110 EHQPHSGSPAAPPSNCNISSP---------------PGLQLHDPQTRTSAPPRVS----- 149
+H + SP A PSNCNISSP PGLQLH PQT T AP RVS
Sbjct: 137 QHWLPTRSPDARPSNCNISSPRVSSYTASTWNISSPPGLQLHGPQTATLAPHRVSRCTAL 196
Query: 150 -----------------------------------SCKALKLEHQLPAGSPAGRPSNWII 174
SC ALKLEHQLPA SP RPSNW I
Sbjct: 197 KLEHQLPTGYTAAWLPAGSPGARPSNCNISSCWVSSCTALKLEHQLPARSPGARPSNWNI 256
Query: 175 SSPQGLQLHSP 185
SSP GLQ H P
Sbjct: 257 SSPLGLQEHGP 267
Score = 87.8 bits (216), Expect = 2e-17
Identities = 69/178 (38%), Positives = 80/178 (44%), Gaps = 37/178 (20%)
Query: 244 PSNWNISSPQGLQLHDPQTGTSAPPG---------SPALLPGSPASRPSNWIISFPALKL 294
P + P LQLH PQTGTSAP L GSPA+ PSNW IS P
Sbjct: 8 PQTGTSAPPPDLQLHGPQTGTSAPRRVSRCTACKLEHELPAGSPAAWPSNWNISSPP--- 64
Query: 295 EHQLPSPQTGTSALPRVSSCRTLKLEHQLSPGSPAAR---------------STTLTEEQ 339
+ QL PQTG SA PR S C L L+HQL GSPAAR +
Sbjct: 65 DRQLHDPQTGISAPPRGSRCTALNLQHQLPTGSPAARLSNRNICSPQGLQLHGSQTGTSA 124
Query: 340 PHQLLHCLQLHNLRHQWQHQLLRGRPAQ------RLSDLKGS---IGPSPRLQLHHPQ 388
PH++ C L NL+H + RP+ R+S S I P LQLH PQ
Sbjct: 125 PHRVSSCTVL-NLQHWLPTRSPDARPSNCNISSPRVSSYTASTWNISSPPGLQLHGPQ 181
>gi|239754902 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 191 bits (484), Expect = 1e-48
Identities = 117/213 (54%), Positives = 129/213 (60%), Gaps = 36/213 (16%)
Query: 32 HPSSGAGPAGTGSFCDTCCITSLCEWIQLPELTDSSPGLQLHDPQSGTSAPPPGLQLHDP 91
H SSGAGPAGTGSFCDTC IT LCE QLPELT+ Q + ++ PGLQLH+P
Sbjct: 83 HHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQYQHQKLTGKMNNTSSSPGLQLHNP 142
Query: 92 QTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVSSC 151
QT TSAPPRVSSC T KLEHQ GSPA NISS PGLQLHDPQTRTSAPP + S
Sbjct: 143 QTRTSAPPRVSSCKTLKLEHQLLPGSPAN-----NISSSPGLQLHDPQTRTSAPPCIFSS 197
Query: 152 KALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSS-----CKALKRQHQL---- 202
L LEH S GLQL P+T+T +S C LK +HQL
Sbjct: 198 TTLNLEHH----------------SSLGLQLQGPQTKTSASPRVFRCTTLKLEHQLLSES 241
Query: 203 -----PPRVSSCTTLKPE-HQLPPGSPAAWPSS 229
PP+V SC TLK E HQL PGS AA PS+
Sbjct: 242 PKTPVPPQVFSCKTLKLEKHQLLPGSTAARPSN 274
Score = 110 bits (276), Expect = 2e-24
Identities = 91/221 (41%), Positives = 100/221 (45%), Gaps = 68/221 (30%)
Query: 157 EHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEH 216
E+Q G+ +N SS GLQLH+P+T T + PPRVSSC TLK EH
Sbjct: 116 EYQYQHQKLTGKMNN--TSSSPGLQLHNPQTRTSA-----------PPRVSSCKTLKLEH 162
Query: 217 QLPPGSPAAWPSSCNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPG 276
QL PGSPA NISS GLQLHDPQT TSAPP
Sbjct: 163 QLLPGSPAN----------------------NISSSPGLQLHDPQTRTSAPP-------- 192
Query: 277 SPASRPSNWIISFPALKLEH------QLPSPQTGTSALPRVSSCRTLKLEHQLSPGSPAA 330
I S L LEH QL PQT TSA PRV C TLKLEHQL SP
Sbjct: 193 --------CIFSSTTLNLEHHSSLGLQLQGPQTKTSASPRVFRCTTLKLEHQLLSESPKT 244
Query: 331 RSTTLTEEQPHQLLHCLQLHNLRHQWQHQLLRGRPAQRLSD 371
P Q+ C L +HQLL G A R S+
Sbjct: 245 -------PVPPQVFSCKTL----KLEKHQLLPGSTAARPSN 274
Score = 45.8 bits (107), Expect = 7e-05
Identities = 35/92 (38%), Positives = 38/92 (41%), Gaps = 44/92 (47%)
Query: 297 QLPSPQTGTSALPRVSSCRTLKLEHQLSPGSPAARSTTLTEEQPHQLLHCLQLHNLRHQW 356
QL +PQT TSA PRVSSC+TLKLEH
Sbjct: 138 QLHNPQTRTSAPPRVSSCKTLKLEH----------------------------------- 162
Query: 357 QHQLLRGRPAQRLSDLKGSIGPSPRLQLHHPQ 388
QLL G PA +S SP LQLH PQ
Sbjct: 163 --QLLPGSPANNISS-------SPGLQLHDPQ 185
Score = 28.9 bits (63), Expect = 8.3
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 321 HQLSPGSPAARSTTLTEEQPHQLLHCLQLHNL-RHQWQHQLLRGRPAQRLSDLKGSIGPS 379
H S PA + + +L QL L +Q+QHQ L G+ + S
Sbjct: 83 HHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQYQHQKLTGK--------MNNTSSS 134
Query: 380 PRLQLHHPQ 388
P LQLH+PQ
Sbjct: 135 PGLQLHNPQ 143
>gi|239749442 PREDICTED: hypothetical protein XP_002347044 [Homo
sapiens]
Length = 269
Score = 179 bits (454), Expect = 4e-45
Identities = 112/213 (52%), Positives = 124/213 (58%), Gaps = 41/213 (19%)
Query: 32 HPSSGAGPAGTGSFCDTCCITSLCEWIQLPELTDSSPGLQLHDPQSGTSAPPPGLQLHDP 91
H SSGAGPAGTGSFCDTC IT LCE QLPELT+ Q + ++ PGLQLH+P
Sbjct: 83 HHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQYQHQKLTGKMNNTSSSPGLQLHNP 142
Query: 92 QTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVSSC 151
QT TSAPPRVSSC T KLEHQ GSPA GLQLHDPQTRTSAPP + S
Sbjct: 143 QTRTSAPPRVSSCKTLKLEHQLLPGSPAF----------EGLQLHDPQTRTSAPPCIFSS 192
Query: 152 KALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSS-----CKALKRQHQL---- 202
L LEH S GLQL P+T+T +S C LK +HQL
Sbjct: 193 TTLNLEHH----------------SSLGLQLQGPQTKTSASPRVFRCTTLKLEHQLLSES 236
Query: 203 -----PPRVSSCTTLKPE-HQLPPGSPAAWPSS 229
PP+V SC TLK E HQL PGS AA PS+
Sbjct: 237 PKTPVPPQVFSCKTLKLEKHQLLPGSTAARPSN 269
Score = 103 bits (257), Expect = 3e-22
Identities = 87/221 (39%), Positives = 97/221 (43%), Gaps = 73/221 (33%)
Query: 157 EHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEH 216
E+Q G+ +N SS GLQLH+P+T T + PPRVSSC TLK EH
Sbjct: 116 EYQYQHQKLTGKMNN--TSSSPGLQLHNPQTRTSA-----------PPRVSSCKTLKLEH 162
Query: 217 QLPPGSPAAWPSSCNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPG 276
QL PGSPA +GLQLHDPQT TSAPP
Sbjct: 163 QLLPGSPAF---------------------------EGLQLHDPQTRTSAPP-------- 187
Query: 277 SPASRPSNWIISFPALKLEH------QLPSPQTGTSALPRVSSCRTLKLEHQLSPGSPAA 330
I S L LEH QL PQT TSA PRV C TLKLEHQL SP
Sbjct: 188 --------CIFSSTTLNLEHHSSLGLQLQGPQTKTSASPRVFRCTTLKLEHQLLSESPKT 239
Query: 331 RSTTLTEEQPHQLLHCLQLHNLRHQWQHQLLRGRPAQRLSD 371
P Q+ C L +HQLL G A R S+
Sbjct: 240 -------PVPPQVFSCKTL----KLEKHQLLPGSTAARPSN 269
Score = 28.9 bits (63), Expect = 8.3
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 321 HQLSPGSPAARSTTLTEEQPHQLLHCLQLHNL-RHQWQHQLLRGRPAQRLSDLKGSIGPS 379
H S PA + + +L QL L +Q+QHQ L G+ + S
Sbjct: 83 HHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQYQHQKLTGK--------MNNTSSS 134
Query: 380 PRLQLHHPQ 388
P LQLH+PQ
Sbjct: 135 PGLQLHNPQ 143
>gi|169172282 PREDICTED: similar to hCG1818014 [Homo sapiens]
Length = 127
Score = 83.2 bits (204), Expect = 4e-16
Identities = 51/104 (49%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
Query: 3 FHPRNLTMDTLVIKGLVSPQDTVRDQRPH-HPSSGAGPAGTGSFCDTCCITSLCEWIQLP 61
FHP TM+TLV+ GLVS + R H S AGP G GSFCDT CIT LCE QLP
Sbjct: 16 FHPGTFTMETLVLMGLVSRHIQLLGIRGRTHRSREAGPTGRGSFCDTYCITGLCEVTQLP 75
Query: 62 ELTD--SSPGLQLHDPQ-----SGTSAPPPGLQLHDPQTGTSAP 98
ELT S+P +P + ++ P LQL DPQT T+AP
Sbjct: 76 ELTQYHSTPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAP 119
Score = 34.7 bits (78), Expect = 0.15
Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 242 PQPSNWNIS--SPQGLQLHDPQTGTS--APPGSPA 272
P+PS+ N S S LQL DPQT T+ APPGSPA
Sbjct: 92 PRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPA 126
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 64.7 bits (156), Expect = 1e-10
Identities = 67/283 (23%), Positives = 93/283 (32%), Gaps = 25/283 (8%)
Query: 61 PELTDSSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAA 120
P T S P P + T+ PPP P T PP ++ P + +
Sbjct: 1473 PTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTT 1532
Query: 121 PPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGL 180
PP S P + P + T+ PP + P + P SP +
Sbjct: 1533 PPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPP-PTTTTTPPPTTTPSPPTTTTPSPPTI 1591
Query: 181 QLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSC 240
+P T S P S T P PP S P + S PP ++
Sbjct: 1592 TTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTP--ITPPTSTTTLPPTTTPSPPPTTTT 1649
Query: 241 TPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLPS 300
TP P+ S P P T T+ PP P P SP + PS
Sbjct: 1650 TPPPTT-TPSPPTTTTPSPPITTTTTPP--PTTTPSSPIT----------------TTPS 1690
Query: 301 PQTGTSALPRVSSCRTLKLEHQLSPGS---PAARSTTLTEEQP 340
P T T P ++ + + +P S P+ TT+T P
Sbjct: 1691 PPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSP 1733
Score = 59.7 bits (143), Expect = 4e-09
Identities = 74/282 (26%), Positives = 97/282 (34%), Gaps = 54/282 (19%)
Query: 60 LPELTDSSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPR-------VSSCTTRKLEHQ 112
LP T SP P + T+ PPP P T T+ PP +S+ TT
Sbjct: 1416 LPPTTTPSP------PTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTTTT-----P 1464
Query: 113 PHSGSPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNW 172
P + +P+ P + SPP P T T+ PP ++ P S P
Sbjct: 1465 PPTTTPSPPTTT---PSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTT 1521
Query: 173 IISSPQGLQLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNI 232
S P P T T S PP + T PP S P +
Sbjct: 1522 TPSPPTTTTTTPPPTTTPS-----------PPTTTPIT--------PPTSTTTLPPTTTP 1562
Query: 233 SSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPAL 292
S PP ++ TP P+ S P P T+ PP P + S P+ + P
Sbjct: 1563 SPPPTTTTTPPPTT-TPSPPTTTTPSPPTITTTTPP------PTTTPSPPTTTTTTPPPT 1615
Query: 293 KLEHQLPSPQTGTSALPRVSSCRTLKLEHQLSPGSPAARSTT 334
PSP T T P S T L +P P +TT
Sbjct: 1616 ----TTPSPPTTTPITPPTS---TTTLPPTTTPSPPPTTTTT 1650
Score = 57.8 bits (138), Expect = 2e-08
Identities = 63/262 (24%), Positives = 95/262 (36%), Gaps = 28/262 (10%)
Query: 75 PQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGLQ 134
P + T +PPP P T T +PP ++ T P + +PP + PP
Sbjct: 1401 PPTTTPSPPPTSTTTLPPTTTPSPPTTTTTT-------PPPTTTPSPPITTTTTPPPTTT 1453
Query: 135 LHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSCK 194
P + T+ PP ++ P +P+ P ++P SP T T +
Sbjct: 1454 PSPPISTTTTPPPTTTPSPPTTTPSPPTTTPS--PPTTTTTTPPPTTTPSPPTTTPIT-- 1509
Query: 195 ALKRQHQLPPRVSSCTTLKP-EHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWNISSPQ 253
PP +S TTL P PP + P SPP ++ P++ P
Sbjct: 1510 --------PP--ASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPT 1559
Query: 254 GLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLPSPQTGTSALPRVSS 313
P T T+ PP + P + P + P PSP T T+ P +
Sbjct: 1560 TTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPP---PTTTPSPPTTTTTTPPPT- 1615
Query: 314 CRTLKLEHQLSPGSPAARSTTL 335
T +P +P +TTL
Sbjct: 1616 --TTPSPPTTTPITPPTSTTTL 1635
Score = 57.4 bits (137), Expect = 2e-08
Identities = 63/245 (25%), Positives = 83/245 (33%), Gaps = 20/245 (8%)
Query: 39 PAGTGSFCDTCCITSLCEWIQLPELTDSSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAP 98
P T S T IT LP T SP P + T+ PPP P T T +P
Sbjct: 1535 PTTTPSPPTTTPITPPTSTTTLPPTTTPSP------PPTTTTTPPPTTTPSPPTTTTPSP 1588
Query: 99 PRVSSCTTRKLEH-QPHSGSPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLE 157
P +++ T P + + PP S P + P + T+ PP +
Sbjct: 1589 PTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTT 1648
Query: 158 HQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQ 217
P + P+ S P P T T SS P + T P
Sbjct: 1649 TTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSS------PITTTPSPPTTTMTTPSPT 1702
Query: 218 LPPGSP---AAWPSSCNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAP----PGS 270
P SP PSS SPP ++ T S P P T TS+P P
Sbjct: 1703 TTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLP 1762
Query: 271 PALLP 275
P++ P
Sbjct: 1763 PSITP 1767
Score = 42.0 bits (97), Expect = 0.001
Identities = 45/192 (23%), Positives = 67/192 (34%), Gaps = 22/192 (11%)
Query: 61 PELTDSSPGLQ-LHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPA 119
P T S P + P S T+ PP P T T+ PP + P +
Sbjct: 1614 PTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTT 1673
Query: 120 APPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQG 179
PP SSP P T + P ++ + P+ + P +++P
Sbjct: 1674 TPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSP 1733
Query: 180 LQLHSPKTETVSSCKALKRQHQLPPRVSS----CTTLKPEHQLPPGSPAAWPSSCNISSP 235
SP T T+++ LPP +S T L P P SP + ++
Sbjct: 1734 TTTPSPPTTTMTT---------LPPTTTSSPLTTTPLPPSITPPTFSPFS-------TTT 1777
Query: 236 PVSSCTPQPSNW 247
P + C P NW
Sbjct: 1778 PTTPCVPL-CNW 1788
Score = 39.7 bits (91), Expect = 0.005
Identities = 57/239 (23%), Positives = 81/239 (33%), Gaps = 32/239 (13%)
Query: 60 LPELTDSSPGLQLHDPQSG--TSAP-----------PPGLQLHDPQTGTSAPPRVSSCTT 106
+ ELT S+P + PQ+ TS+P PP +++ T T+ P ++ TT
Sbjct: 4206 IAELTTSNPPPESSTPQTSRSTSSPLTESTTLLSTLPPAIEM----TSTAPPSTPTAPTT 4261
Query: 107 RKLEHQPHSGSPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPA 166
SG P +SPPG T +S+ P S+ + P +P
Sbjct: 4262 T-------SGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTTTTSAWTPTPTPL 4314
Query: 167 GRPSNWIISSPQGLQLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAW 226
PS I GL+ P +V C L + P T S +
Sbjct: 4315 STPS---IIRTTGLR---PYPSSVLICCVLNDTYYAPGEEVYNGTYGDTCYFVNCSLSCT 4368
Query: 227 PSSCNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNW 285
N S P S TP PS + + T + PP P P P W
Sbjct: 4369 LEFYNWSCPSTPSPTPTPSKSTPTPSKPSSTPSKPTPGTKPPECPDFDP--PRQENETW 4425
Score = 34.7 bits (78), Expect = 0.15
Identities = 44/204 (21%), Positives = 77/204 (37%), Gaps = 10/204 (4%)
Query: 93 TGTSAPPRVSSCTTRKLEHQPH---SGSPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVS 149
TGT P TT + P + +P P + P QT T+ P +
Sbjct: 4122 TGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTT 4181
Query: 150 SCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSCKALKRQHQLPPRVSSC 209
+ P G+ G P++ + L +P E+ + + L +
Sbjct: 4182 TTVT---PTPTPTGTQTGPPTHTSTAPIAELTTSNPPPESSTPQTSRSTSSPLTESTTLL 4238
Query: 210 TTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTG-TSAPP 268
+TL P ++ +P + P++ +S + +P PS +SP G TG +SAP
Sbjct: 4239 STLPPAIEMTSTAPPSTPTAPTTTSGG-HTLSPPPS--TTTSPPGTPTRGTTTGSSSAPT 4295
Query: 269 GSPALLPGSPASRPSNWIISFPAL 292
S + A P+ +S P++
Sbjct: 4296 PSTVQTTTTSAWTPTPTPLSTPSI 4319
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 56.2 bits (134), Expect = 5e-08
Identities = 87/301 (28%), Positives = 115/301 (38%), Gaps = 40/301 (13%)
Query: 61 PELTDSSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSS---------CTTRKL-- 109
PE +P L +PQ S P LQ P S P VSS C ++KL
Sbjct: 143 PESPKPTPLTPL-EPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAP 201
Query: 110 --EHQPHSGSPAAPPS-NCNISSP-PGLQLHDPQTRTSAPPRVSSCKALKLEHQ------ 159
+P +P +P S +S+P P Q H P+T PP SS ++ L
Sbjct: 202 VPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETL--GPPSASSPESPVLAASPEPWGP 259
Query: 160 LPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQLP 219
PA SP R S S S E A+ + + P S + KP P
Sbjct: 260 SPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPG---P 316
Query: 220 PGSPAAWPSSCNISSPPVSSCTPQPS----NWN-ISSPQGLQLHDPQTGTSAPPGSPALL 274
PGSP W S+ + SS P P PS W I S + +SA S ++
Sbjct: 317 PGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVS 376
Query: 275 PG---SPASRPSNWIISFPALKLEHQLPSPQTGTSALPRVSSCRTLKLEHQLSPGSPAAR 331
P SP + P +W P L+ SP+ A+P VS +L P SP R
Sbjct: 377 PSSWKSPPASPESWKSGPPELRKTAPTLSPE-HWKAVPPVSP----ELRKPGPPLSPEIR 431
Query: 332 S 332
S
Sbjct: 432 S 432
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 55.1 bits (131), Expect = 1e-07
Identities = 86/335 (25%), Positives = 123/335 (36%), Gaps = 74/335 (22%)
Query: 61 PELTDSSPG-LQLHDPQSGTSAPPP----GLQLHDPQT-----GTSAPPRVS-SCTTRKL 109
P ++SPG + SGT+ P P GL++ +T T AP R + S R+
Sbjct: 104 PPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRD 163
Query: 110 EHQPHSGSPAAPPSNCNISSPPGLQLHDPQTRTSAPPR---------VSSCKALKLEHQL 160
P G+P+ P+ S G ++ P+ SA PR VSS EH
Sbjct: 164 TSGPTPGTPS--PAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSAS----EHST 217
Query: 161 PAGSPAGR-----------PSNWIISSPQGLQLHSPKTETVSS----------------- 192
SPA R P++ +SS L SP S+
Sbjct: 218 TEPSPAARRRPSAGGGLQRPASRSLSS-SATPLSSPARSGPSARGTPRAPAHPSQPKPKG 276
Query: 193 CKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWNISSP 252
+AL+ PPR + L P P +P+ + PP ++ TP P+ S P
Sbjct: 277 LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPP 336
Query: 253 QGLQLHDPQTGTSAPPGSPALLPGSPASRPSN--------------WIISFPALKLEHQL 298
L SAPP S LP PA+ PS + + P +++ H L
Sbjct: 337 LATPLPLAPPSPSAPP-SLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSL 395
Query: 299 PSPQTGTSALPRVSSCRTLKLEHQLSPGSPAARST 333
SP P S L+ S GSP ++T
Sbjct: 396 TSPSLQAPPSPLALS----SLQATTSLGSPTLQAT 426
Score = 47.4 bits (111), Expect = 2e-05
Identities = 63/227 (27%), Positives = 83/227 (36%), Gaps = 52/227 (22%)
Query: 70 LQLHDPQSGTSA---PPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSP-----AAP 121
L H PQ+ S+ PP Q PP +S TT LE+ P P +AP
Sbjct: 495 LASHSPQAPLSSLIMPPLETQSSLAPPSLQTPP--ASLTTPPLENLPSLAPPPLQTASAP 552
Query: 122 PSNCNISSPP-----GLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISS 176
+ ++ +PP LQ P T+ PP S A PA ++S
Sbjct: 553 LTTPHLETPPCPAPCPLQA-PPSPLTTPPPETPSSIATPPPQAPPA-----------LAS 600
Query: 177 PQGLQLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPP 236
P L SP +++ PP + P Q PP PA SPP
Sbjct: 601 PPLQGLPSPPLSPLAT----------PPPQAPPXLALPPLQAPPSPPA---------SPP 641
Query: 237 VSS-CTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRP 282
+S TP P +P L +H Q S PP P P SP + P
Sbjct: 642 LSPLATPSPQ-----APNALAVHLLQAPFSPPPSPPVQAPFSPPASP 683
Score = 44.7 bits (104), Expect = 1e-04
Identities = 63/250 (25%), Positives = 87/250 (34%), Gaps = 53/250 (21%)
Query: 72 LHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPP 131
L P S + PPP APP ++S + L P S PP +PP
Sbjct: 569 LQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQ-----APP 623
Query: 132 GLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLH-------- 183
L L Q S P P SP PS +P L +H
Sbjct: 624 XLALPPLQAPPSPPAS-------------PPLSPLATPSP---QAPNALAVHLLQAPFSP 667
Query: 184 --SPKTETVSSCKALK--RQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSS 239
SP + S A PP + + P Q+PP PA+ P S + + PP +
Sbjct: 668 PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA- 726
Query: 240 CTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLP 299
P P +++P PP PA P SP++ P + P L L
Sbjct: 727 --PPP----LAAPP----------LQVPPSPPASPPMSPSATPPPRV---PPLLAAPPLQ 767
Query: 300 SPQTGTSALP 309
P + ++LP
Sbjct: 768 VPPSPPASLP 777
Score = 44.3 bits (103), Expect = 2e-04
Identities = 61/270 (22%), Positives = 102/270 (37%), Gaps = 50/270 (18%)
Query: 81 APPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGLQLHDPQT 140
+PPP + P + ++PP VS T + P S AAPP + PP P +
Sbjct: 666 SPPPSPPVQAPFSPPASPP-VSPSATPPSQAPP---SLAAPP----LQVPPSPPASPPMS 717
Query: 141 RTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSCKALKRQH 200
++ PP + Q+P PA P + + P
Sbjct: 718 PSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPP---------------------- 755
Query: 201 QLPPRVSSCTTLKPEHQLPPGSPAAWPSS----------CNISSPPVSSCTPQPSNWNIS 250
++PP +++ P Q+PP PA+ P S +++PP+ + P+++
Sbjct: 756 RVPPLLAA-----PPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQ 810
Query: 251 SPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLPSPQTGTSALPR 310
+P P + + PP + +P + + P L+ + P+P TS
Sbjct: 811 APFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTS---- 866
Query: 311 VSSCRTLKLEHQLSPGSPAARSTTLTEEQP 340
VS R L L P P +RS + T P
Sbjct: 867 VSGPR-LTLALAPGPPPPPSRSPSSTLSGP 895
Score = 43.9 bits (102), Expect = 2e-04
Identities = 84/335 (25%), Positives = 117/335 (34%), Gaps = 64/335 (19%)
Query: 61 PELTDSSPGLQL--HDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSP 118
P + P LQ P + S PP + Q APP + + ++ H S S
Sbjct: 345 PPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQ----APPSLQTIPPIQVPHSLTSPSL 400
Query: 119 AAPPSNCNISS--------PPGLQL---------HDPQTRTSAPPRVSSCKALKLEHQLP 161
APPS +SS P LQ Q ++P R +S Q P
Sbjct: 401 QAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAP 460
Query: 162 AGSPAGRPSNWIISSPQGLQLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPG 221
PA P +S P L SP T + +AL P+ + + P L
Sbjct: 461 LSLPASPPLQTSLS-PAVSPLSSPLT--IHPLQALSSLASHSPQAPLSSLIMPP--LETQ 515
Query: 222 SPAAWPSSCNISSPPVSSCTPQPSNWNISSPQGLQLHD---------------------- 259
S A PS + +PP S TP N +P LQ
Sbjct: 516 SSLAPPS---LQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAP 572
Query: 260 PQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLPSPQTGTSALPRVSSCRTLKL 319
P T+ PP +P+ + P P ++ P L+ LPSP A P + L L
Sbjct: 573 PSPLTTPPPETPSSIATPPPQAPP--ALASPPLQ---GLPSPPLSPLATPPPQAPPXLAL 627
Query: 320 EHQLSPGSPAARS-----TTLTEEQPHQL-LHCLQ 348
+P SP A T + + P+ L +H LQ
Sbjct: 628 PPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQ 662
Score = 40.8 bits (94), Expect = 0.002
Identities = 60/223 (26%), Positives = 82/223 (36%), Gaps = 30/223 (13%)
Query: 75 PQSGTSAPPPGLQ-LHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGL 133
P + P GLQ L PQ PPR + P S SP A PS + P
Sbjct: 266 PAHPSQPKPKGLQALRPPQV---TPPRKDAAPALG----PLSSSPLATPSPSGTKARP-- 316
Query: 134 QLHDPQTR-TSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSS 192
+ P T P + L L SP+ PS + SP +P ++ S
Sbjct: 317 -VPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPA----TPPSQAPPS 371
Query: 193 CKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPS-----NW 247
Q PP + + ++ H L S A PS +SS ++ P+ ++
Sbjct: 372 MTTPPMQ--APPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSF 429
Query: 248 NISSPQGLQ--LHDPQTGTSAPPGSPAL-----LPGSPASRPS 283
SP+ Q L P S PP SP L LP SP + S
Sbjct: 430 LTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTS 472
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 52.4 bits (124), Expect = 7e-07
Identities = 66/251 (26%), Positives = 84/251 (33%), Gaps = 57/251 (22%)
Query: 71 QLHDPQSGTSAPPPGLQLHDPQTGTS--APPRVSSCTTRKLEHQPHSGSPAAPPSNCNIS 128
Q H SG PPPG H + G+S A P S + L +P+ PA P
Sbjct: 501 QQHHGNSGP--PPPGAFPHPLEGGSSHHAHPYAMSPSLGSL--RPYPPGPAHLP------ 550
Query: 129 SPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTE 188
PP Q+ Q + PP SS + Q P PS PQG P
Sbjct: 551 -PPHSQVSYSQAGPNGPPVSSSSNSSSSTSQ--GSYPCSHPSP--SQGPQGAPYPFPPVP 605
Query: 189 TVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWN 248
TV++ A TL SPA + ++ PP P P +
Sbjct: 606 TVTTSSA---------------TLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYK 650
Query: 249 ISSPQGLQLHDPQT----------GTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQL 298
++P G + P + GTS P G PGSP P
Sbjct: 651 TATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPG--------------- 695
Query: 299 PSPQTGTSALP 309
P P G S LP
Sbjct: 696 PLPPAGPSGLP 706
Score = 50.4 bits (119), Expect = 3e-06
Identities = 81/334 (24%), Positives = 109/334 (32%), Gaps = 39/334 (11%)
Query: 61 PELTDSSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAA 120
P+L G L P G + P G PP + + SG+ A
Sbjct: 217 PQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSS------SGASGA 270
Query: 121 PPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLP--AGSPAGRPSNWIISSPQ 178
PP+ PP + ++ PP H P PA RP N +SP
Sbjct: 271 PPTK-----PPTTPVGGGNLPSAPPPA-------NFPHVTPNLPPPPALRPLNNASASPP 318
Query: 179 GLQLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPE-HQLPPGSPAAWPSSCNISSPPV 237
GL S + LPP TL P H LPP S +A +PP+
Sbjct: 319 GLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSA-------PAPPM 371
Query: 238 SSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISF---PALKL 294
P S+ + S+ + S P S AL P P S P +S P
Sbjct: 372 RF--PYSSSSSSSAAASSSSSSSSSSASPFPASQAL-PSYPHSFPPPTSLSVSNQPPKYT 428
Query: 295 EHQLPSPQTGTSALPRVSSCRTLKLEHQLSPGS-PAARSTTLTEEQPHQLLHCLQLHNLR 353
+ LPS + P L PG P + T P H H+ +
Sbjct: 429 QPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHH----HHHQ 484
Query: 354 HQWQHQLLRGRPAQRLSDLKGSIGPSPRLQLHHP 387
Q Q Q + + Q+ G+ GP P HP
Sbjct: 485 QQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHP 518
Score = 39.7 bits (91), Expect = 0.005
Identities = 65/274 (23%), Positives = 94/274 (34%), Gaps = 50/274 (18%)
Query: 64 TDSSPGLQLHDPQSGTSAP--PPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSG----- 116
+DSS GL G + P PP L PQ S P + + +PH
Sbjct: 145 SDSSSGLS-----QGPARPYHPPPLFPPSPQPPDSTPRQPEA------SFEPHPSVTPTG 193
Query: 117 --SPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWII 174
+P PP++ +PPG PQ V S P P G + +
Sbjct: 194 YHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSG---------PPMGPKGGGAASSV 244
Query: 175 SSPQGLQLHSPKTE--TVSSCKALKRQHQLPPRV----SSCTTLKPEHQLP------PGS 222
P G + H P T +VSS A PP + + P P P
Sbjct: 245 GGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPP 304
Query: 223 PAAWPSSCNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPPG---SPALLPGSPA 279
PA P + +SPP P P ++ SP + Q PPG P L P +
Sbjct: 305 PALRPLNNASASPPGLGAQPLPG--HLPSPHAM----GQGMGGLPPGPEKGPTLAPSPHS 358
Query: 280 SRPSNWIISFPALKLEHQLPSPQTGTSALPRVSS 313
P++ P ++ + S + ++ SS
Sbjct: 359 LPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSS 392
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 52.4 bits (124), Expect = 7e-07
Identities = 66/251 (26%), Positives = 84/251 (33%), Gaps = 57/251 (22%)
Query: 71 QLHDPQSGTSAPPPGLQLHDPQTGTS--APPRVSSCTTRKLEHQPHSGSPAAPPSNCNIS 128
Q H SG PPPG H + G+S A P S + L +P+ PA P
Sbjct: 501 QQHHGNSGP--PPPGAFPHPLEGGSSHHAHPYAMSPSLGSL--RPYPPGPAHLP------ 550
Query: 129 SPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTE 188
PP Q+ Q + PP SS + Q P PS PQG P
Sbjct: 551 -PPHSQVSYSQAGPNGPPVSSSSNSSSSTSQ--GSYPCSHPSP--SQGPQGAPYPFPPVP 605
Query: 189 TVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWN 248
TV++ A TL SPA + ++ PP P P +
Sbjct: 606 TVTTSSA---------------TLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYK 650
Query: 249 ISSPQGLQLHDPQT----------GTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQL 298
++P G + P + GTS P G PGSP P
Sbjct: 651 TATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPG--------------- 695
Query: 299 PSPQTGTSALP 309
P P G S LP
Sbjct: 696 PLPPAGPSGLP 706
Score = 50.4 bits (119), Expect = 3e-06
Identities = 81/334 (24%), Positives = 109/334 (32%), Gaps = 39/334 (11%)
Query: 61 PELTDSSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAA 120
P+L G L P G + P G PP + + SG+ A
Sbjct: 217 PQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSS------SGASGA 270
Query: 121 PPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLP--AGSPAGRPSNWIISSPQ 178
PP+ PP + ++ PP H P PA RP N +SP
Sbjct: 271 PPTK-----PPTTPVGGGNLPSAPPPA-------NFPHVTPNLPPPPALRPLNNASASPP 318
Query: 179 GLQLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPE-HQLPPGSPAAWPSSCNISSPPV 237
GL S + LPP TL P H LPP S +A +PP+
Sbjct: 319 GLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSA-------PAPPM 371
Query: 238 SSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISF---PALKL 294
P S+ + S+ + S P S AL P P S P +S P
Sbjct: 372 RF--PYSSSSSSSAAASSSSSSSSSSASPFPASQAL-PSYPHSFPPPTSLSVSNQPPKYT 428
Query: 295 EHQLPSPQTGTSALPRVSSCRTLKLEHQLSPGS-PAARSTTLTEEQPHQLLHCLQLHNLR 353
+ LPS + P L PG P + T P H H+ +
Sbjct: 429 QPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHH----HHHQ 484
Query: 354 HQWQHQLLRGRPAQRLSDLKGSIGPSPRLQLHHP 387
Q Q Q + + Q+ G+ GP P HP
Sbjct: 485 QQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHP 518
Score = 39.7 bits (91), Expect = 0.005
Identities = 65/274 (23%), Positives = 94/274 (34%), Gaps = 50/274 (18%)
Query: 64 TDSSPGLQLHDPQSGTSAP--PPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSG----- 116
+DSS GL G + P PP L PQ S P + + +PH
Sbjct: 145 SDSSSGLS-----QGPARPYHPPPLFPPSPQPPDSTPRQPEA------SFEPHPSVTPTG 193
Query: 117 --SPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWII 174
+P PP++ +PPG PQ V S P P G + +
Sbjct: 194 YHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSG---------PPMGPKGGGAASSV 244
Query: 175 SSPQGLQLHSPKTE--TVSSCKALKRQHQLPPRV----SSCTTLKPEHQLP------PGS 222
P G + H P T +VSS A PP + + P P P
Sbjct: 245 GGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPP 304
Query: 223 PAAWPSSCNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPPG---SPALLPGSPA 279
PA P + +SPP P P ++ SP + Q PPG P L P +
Sbjct: 305 PALRPLNNASASPPGLGAQPLPG--HLPSPHAM----GQGMGGLPPGPEKGPTLAPSPHS 358
Query: 280 SRPSNWIISFPALKLEHQLPSPQTGTSALPRVSS 313
P++ P ++ + S + ++ SS
Sbjct: 359 LPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSS 392
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 51.2 bits (121), Expect = 2e-06
Identities = 61/214 (28%), Positives = 75/214 (35%), Gaps = 27/214 (12%)
Query: 75 PQSGTSAPPPGLQ-LHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGL 133
P + P GLQ L PQ PPR + P S SP A PS L
Sbjct: 266 PAHPSQPKPKGLQALRPPQV---TPPRKDAAPALG----PLSSSPLATPS-----PSAAL 313
Query: 134 QLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSC 193
Q P T + P S L L SP+ PS + SP +P ++ +S
Sbjct: 314 QSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPA----TPPSQATTSL 369
Query: 194 KA--LKRQHQLPPRVSSCTTLKPEHQLPPG---SPAAWPSSCNISSPPVSSCTPQPSNWN 248
+ L+ H P P Q PP P P S S P TP P
Sbjct: 370 GSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQ--- 426
Query: 249 ISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRP 282
+P L +H Q S PP P P SP + P
Sbjct: 427 --APNALAVHLLQAPFSPPPSPPVQAPFSPPASP 458
Score = 47.4 bits (111), Expect = 2e-05
Identities = 87/323 (26%), Positives = 117/323 (36%), Gaps = 63/323 (19%)
Query: 61 PELTDSSPGL-QLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSG-SP 118
P D++P L L T +P LQ P T A P SS T + P + SP
Sbjct: 287 PPRKDAAPALGPLSSSPLATPSPSAALQSQAPPT-LPATPHSSSLTCQLATPLPLAPPSP 345
Query: 119 AAPPSNCNISSPPGLQ-------------------LHDPQTRTSAPPRVSSCKALKLEH- 158
+APPS + SPP L P A P + AL L
Sbjct: 346 SAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPL 405
Query: 159 QLPAGSPAGRPSNWIIS----SPQGLQLH----------SPKTETVSSCKALK--RQHQL 202
Q P PA P + + + +P L +H SP + S A
Sbjct: 406 QAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSAT 465
Query: 203 PPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWNISSPQGLQLHDPQT 262
PP + + P Q+PP PA+ P S + + PP + P P +++P LQL P
Sbjct: 466 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA---PPP----LAAPP-LQLAKPPP 517
Query: 263 GTSAPPGSPAL--LPGSPASRPSNWIISFPALKLEHQ---LPSPQTGTSALPRVSSCRTL 317
+P L LP PAS P S P+ L P PQ P V + L
Sbjct: 518 QAPPALATPPLQALPSPPASFPGQAPFS-PSASLPMSPLATPPPQA-----PPVLAAPLL 571
Query: 318 KLEHQLSPGSPAARSTTLTEEQP 340
++ P SP A T +P
Sbjct: 572 QV-----PPSPPASPTLQAPRRP 589
Score = 40.0 bits (92), Expect = 0.004
Identities = 55/242 (22%), Positives = 91/242 (37%), Gaps = 42/242 (17%)
Query: 83 PPGLQLHDPQTGTSAP--PRVSSCTTRKLEHQPHS------GSPAAPPSNCNISSPPGLQ 134
PP L L Q S P P +S T + P++ +P +PP + + +P
Sbjct: 397 PPALALPPLQAPPSPPASPPLSPLATPSPQ-APNALAVHLLQAPFSPPPSPPVQAPFSPP 455
Query: 135 LHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSCK 194
P + ++ PP + Q+P PA P + + P +P +
Sbjct: 456 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP----QAPPPLAAPPLQ 511
Query: 195 ALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPS------SCNISSPPVSSCTPQ----- 243
K Q PP +++ P Q P PA++P S ++ P+++ PQ
Sbjct: 512 LAKPPPQAPPALAT-----PPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVL 566
Query: 244 -----------PSNWNISSPQGLQLHDPQTGTSAPPGSPALLPG--SPASRPSNWIISFP 290
P++ + +P+ P T S P + AL PG P SR + +S P
Sbjct: 567 AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGP 626
Query: 291 AL 292
L
Sbjct: 627 DL 628
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 50.8 bits (120), Expect = 2e-06
Identities = 68/232 (29%), Positives = 84/232 (36%), Gaps = 34/232 (14%)
Query: 64 TDSSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPS 123
T+ SP + G P L T S+P R S + R G+P AP +
Sbjct: 209 TEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPAR-SGPSAR--------GTPRAP-A 258
Query: 124 NCNISSPPGLQ-LHDPQTRTSAPPRVSSCKALKLEHQLPAG--SPAGRPSNWIISSPQGL 180
+ + P GLQ L PQ PPR + AL P SP+ PS S+P L
Sbjct: 259 HPSQPKPKGLQALRPPQV---TPPRKDAAPALGPLSSSPLATPSPSAPPSP---SAPPSL 312
Query: 181 Q-LHSP------KTETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPG---SPAAWPSSC 230
Q L SP + T L+ H P P Q PP P P S
Sbjct: 313 QTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSP 372
Query: 231 NISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRP 282
S P TP P +P L +H Q S PP P P SP + P
Sbjct: 373 PASPPLSPLATPSPQ-----APNALAVHLLQAPFSPPPSPPVQAPFSPPASP 419
Score = 42.4 bits (98), Expect = 7e-04
Identities = 77/282 (27%), Positives = 103/282 (36%), Gaps = 53/282 (18%)
Query: 80 SAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGLQLHDPQ 139
SAPP QT S P S T L GSP ++ + SPP L P
Sbjct: 301 SAPPSPSAPPSLQTLPSPPATPPSQATTSL------GSPTLQATHSFLPSPPLSPLATP- 353
Query: 140 TRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIIS----SPQGLQLH----------SP 185
PP+ AL Q P PA P + + + +P L +H SP
Sbjct: 354 -----PPQAPPALALP-PLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP 407
Query: 186 KTETVSSCKALK--RQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQ 243
+ S A PP + + P Q+PP PA+ P S + + PP + P
Sbjct: 408 PVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA---PP 464
Query: 244 PSNWNISSPQGLQLHDPQTGTSAPPGSPAL--LPGSPASRPSNWIISFPALKLEHQ---L 298
P +++P LQL P +P L LP PAS P S P+ L
Sbjct: 465 P----LAAPP-LQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFS-PSASLPMSPLAT 518
Query: 299 PSPQTGTSALPRVSSCRTLKLEHQLSPGSPAARSTTLTEEQP 340
P PQ P V + L++ P SP A T +P
Sbjct: 519 PPPQA-----PPVLAAPLLQV-----PPSPPASPTLQAPRRP 550
Score = 40.0 bits (92), Expect = 0.004
Identities = 55/242 (22%), Positives = 91/242 (37%), Gaps = 42/242 (17%)
Query: 83 PPGLQLHDPQTGTSAP--PRVSSCTTRKLEHQPHS------GSPAAPPSNCNISSPPGLQ 134
PP L L Q S P P +S T + P++ +P +PP + + +P
Sbjct: 358 PPALALPPLQAPPSPPASPPLSPLATPSPQ-APNALAVHLLQAPFSPPPSPPVQAPFSPP 416
Query: 135 LHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSCK 194
P + ++ PP + Q+P PA P + + P +P +
Sbjct: 417 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP----QAPPPLAAPPLQ 472
Query: 195 ALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPS------SCNISSPPVSSCTPQ----- 243
K Q PP +++ P Q P PA++P S ++ P+++ PQ
Sbjct: 473 LAKPPPQAPPALAT-----PPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVL 527
Query: 244 -----------PSNWNISSPQGLQLHDPQTGTSAPPGSPALLPG--SPASRPSNWIISFP 290
P++ + +P+ P T S P + AL PG P SR + +S P
Sbjct: 528 AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGP 587
Query: 291 AL 292
L
Sbjct: 588 DL 589
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 50.1 bits (118), Expect = 3e-06
Identities = 66/275 (24%), Positives = 107/275 (38%), Gaps = 49/275 (17%)
Query: 58 IQLPELTDSSPGLQLHDPQSGTSAPP---PGLQLHDPQTGTSAPPRVSSCTTRKLEHQPH 114
+QL + Q Q+ + PP P +Q P + P ++ +++ H H
Sbjct: 244 LQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQL-----QQMHHTQH 298
Query: 115 SGSPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALK----------------LEH 158
P P + P QL PQ++T P VS +AL +
Sbjct: 299 HQPPPQPQQPPVAQNQPS-QL-PPQSQTQ--PLVSQAQALPGQMLYTQPPLKFVRAPMVV 354
Query: 159 QLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSCKALKRQH---QLPPRVSSCTTLKPE 215
Q P P + + + Q Q+ +P + ++ A H + PP ++ + P
Sbjct: 355 QQPPVQPQVQQQQTAVQTAQAAQMVAPGVQMITEALAQGGMHIRARFPP--TTAVSAIPS 412
Query: 216 HQLPPG-SPAAWPSSCNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALL 274
+P G P A S ++ P +SS +P G Q+ PQ+ PP P+
Sbjct: 413 SSIPLGRQPMAQVSQSSL--PMLSSPSP-----------GQQVQTPQS--MPPPPQPSPQ 457
Query: 275 PGSPASRPSNWIISFPALKLEHQLPSPQTGTSALP 309
PG P+S+P++ + S PA LPSP S P
Sbjct: 458 PGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSP 492
Score = 34.3 bits (77), Expect = 0.20
Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
Query: 60 LPELTDSSPGLQLHDPQS----GTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHS 115
LP L+ SPG Q+ PQS +P PG P + S+ P S + S
Sbjct: 430 LPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPS 489
Query: 116 GSPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKA 153
SP + N S P L+ P +S S +A
Sbjct: 490 QSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQA 527
Score = 31.6 bits (70), Expect = 1.3
Identities = 37/125 (29%), Positives = 53/125 (42%), Gaps = 21/125 (16%)
Query: 160 LPAGS-PAGRPSNWIISSPQGLQLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQL 218
+P+ S P GR +S L SP S + ++ +PP P+
Sbjct: 410 IPSSSIPLGRQPMAQVSQSSLPMLSSP-----SPGQQVQTPQSMPP--------PPQPSP 456
Query: 219 PPGSPAAWPSSCNISSPPV---SSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLP 275
PG P++ P+S N+SS P SS P PS SP + PQ + PG P P
Sbjct: 457 QPGQPSSQPNS-NVSSGPAPSPSSFLPSPSPQPSQSP--VTARTPQNFSVPSPG-PLNTP 512
Query: 276 GSPAS 280
+P+S
Sbjct: 513 VNPSS 517
Score = 29.6 bits (65), Expect = 4.9
Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 7/112 (6%)
Query: 92 QTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVSSC 151
Q S+ P +SS + + P S P PS PG P + S+ P S
Sbjct: 424 QVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPS-----PQPGQPSSQPNSNVSSGPAPSPS 478
Query: 152 KALKLEHQLPAGSP--AGRPSNWIISSPQGLQLHSPKTETVSSCKALKRQHQ 201
L P+ SP A P N+ + SP L + +S + + + Q
Sbjct: 479 SFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQ 530
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 49.7 bits (117), Expect = 5e-06
Identities = 73/303 (24%), Positives = 99/303 (32%), Gaps = 33/303 (10%)
Query: 61 PELTDSSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAA 120
P T SP L P + P P+ G + P + TT G PA
Sbjct: 1198 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPAT 1257
Query: 121 PPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGL 180
PP +PP + + PP + + P G PA P + P
Sbjct: 1258 PPPK-GAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAA- 1315
Query: 181 QLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSC 240
+P + S + PP V+ P + P PA PSS + P S
Sbjct: 1316 ---TPPSPKGSPGTPPPKGAPTPPAVT-----PPSPKGTPTLPATTPSSKGGPTTPSSKE 1367
Query: 241 TPQPSNWNISSPQG--LQLHDPQTGTSAP-----PGSPALLPGSP------------ASR 281
P P S G + P+ G + P P SPA++P SP A+
Sbjct: 1368 GPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAAT 1427
Query: 282 PSNWIISFPALKLEHQLPSPQT----GTSALPRVSSCRTLKLEHQLSPGSPAARSTTLTE 337
PS ++ PA+ +P T G A P TL SP P A T
Sbjct: 1428 PSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATS 1487
Query: 338 EQP 340
P
Sbjct: 1488 SSP 1490
Score = 49.3 bits (116), Expect = 6e-06
Identities = 62/258 (24%), Positives = 87/258 (33%), Gaps = 17/258 (6%)
Query: 61 PELTDSSPGLQLHDPQSGTSAP-------PPGLQLHDPQTGTSAPPRVSSCTTRKLEHQP 113
P+ + P P+ G + P PP P+ G + P + T +
Sbjct: 959 PKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPS 1018
Query: 114 HSGSPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEH-QLPAGSPAGRPSNW 172
GSPAA P S+PP P+ +A P P G PA PS
Sbjct: 1019 PKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPA-TPSLK 1077
Query: 173 IISSPQGLQLHSPK-TETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSS-- 229
+P SPK S K P P H+ P +PAA P S
Sbjct: 1078 GAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPK 1137
Query: 230 CNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSP-----ALLPGSPASRPSN 284
+++PP P+ S GL P+ + P +P L SP P+
Sbjct: 1138 GGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTT 1197
Query: 285 WIISFPALKLEHQLPSPQ 302
+ P+ K PSP+
Sbjct: 1198 PAATPPSPKGGLATPSPK 1215
Score = 41.2 bits (95), Expect = 0.002
Identities = 59/248 (23%), Positives = 79/248 (31%), Gaps = 9/248 (3%)
Query: 61 PELTDSSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAA 120
P T SP P + PP P+ G + P + T G PA
Sbjct: 943 PAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPAT 1002
Query: 121 PPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKA-LKLEHQLPAGSPAGRPSNWIISSPQG 179
PS +PP + P+ +A P P GSPA P +
Sbjct: 1003 -PSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPA 1061
Query: 180 LQLHSPK-TETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSS--CNISSPP 236
L SPK S K P P + P PAA P S +++PP
Sbjct: 1062 ATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPP 1121
Query: 237 VSSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEH 296
P+ S GL P+ + P +P G A+ P + PA
Sbjct: 1122 HKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAA---- 1177
Query: 297 QLPSPQTG 304
PSP+ G
Sbjct: 1178 TPPSPKGG 1185
Score = 37.7 bits (86), Expect = 0.018
Identities = 55/229 (24%), Positives = 86/229 (37%), Gaps = 19/229 (8%)
Query: 117 SPAAPPSNCNISSPPGLQLHDPQTRTSA-PPRVSSCKALKLEHQLPAGSPAGRPS-NWII 174
SP+ PP+ +PPG + D + TSA P SS K E + + + + + ++
Sbjct: 736 SPSLPPAG----TPPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLA 791
Query: 175 SSPQGLQLH-SPKTETVSSCKALKRQHQLPPRVSSCTT-----LKPEHQLPPGSPAAWPS 228
SP L + SP+T+ + K +SS + PE+ L P+
Sbjct: 792 DSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPA 851
Query: 229 SCNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIIS 288
+ + +PP P PS SP+G+ L +T T + P G P
Sbjct: 852 TTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPK----Q 907
Query: 289 FPALKLEHQLPSPQTGTSA---LPRVSSCRTLKLEHQLSPGSPAARSTT 334
PAL + P T A +P S + +P SP T
Sbjct: 908 APALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPAT 956
Score = 37.7 bits (86), Expect = 0.018
Identities = 57/267 (21%), Positives = 94/267 (35%), Gaps = 46/267 (17%)
Query: 58 IQLPELTDSSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGS 117
I P+ +SP + P+ + P P G PP V+ + +K P + +
Sbjct: 1395 IPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKA---PATSA 1451
Query: 118 PAAPPSNCNISSPPGLQLHDPQT--RTSAPPRVSSCKALKLEHQLPAGSPAGRPS----- 170
P P+ + P L P + AP +V++ + K PA P G P+
Sbjct: 1452 PKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPA--PMGAPTLPAVI 1509
Query: 171 ----NWIISSPQGLQLHSPKTETVSSCKA----LKRQHQLPPRVSSCTTLKPEHQLPPGS 222
+ ++P + T T+ S K ++ +PP ++ + K P
Sbjct: 1510 PSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKE 1569
Query: 223 PAAWPSSCNISSPP-----------------VSSCTPQPSNWNISSPQGLQLHDPQTGTS 265
A PSS SSPP + PS +P + P+ G +
Sbjct: 1570 APATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPA 1629
Query: 266 ---------APPGSPALLPGSPASRPS 283
+PP +P+ L SP S S
Sbjct: 1630 TPAPKGTPTSPPVTPSSLKDSPTSPAS 1656
Score = 29.3 bits (64), Expect = 6.3
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 8/117 (6%)
Query: 232 ISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSA--PPGSPALLPGSPASRPSNWIISF 289
+SS P+S+ P + +P + Q T+ P P P + PS+ ++ F
Sbjct: 467 MSSGPISNIEPTSPAALVMAPVAPKEPSTQVATTLRIPVSPPLPDPEDLKNLPSSVLVKF 526
Query: 290 PALKLEHQLPSPQTGTSALPRVSSCRT------LKLEHQLSPGSPAARSTTLTEEQP 340
P K +P+ G P + T L L SP+ +ST+ + E P
Sbjct: 527 PTQKDLQTVPASLEGAPFSPAQAGLTTKKDPTVLPLVQAAPKNSPSFQSTSSSPEIP 583
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 47.8 bits (112), Expect = 2e-05
Identities = 77/297 (25%), Positives = 105/297 (35%), Gaps = 61/297 (20%)
Query: 69 GLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSP------AAPP 122
G Q D Q+ + AP P + P G S L PH SP + PP
Sbjct: 746 GPQAPDSQA-SPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPP 804
Query: 123 SNC-NISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQ 181
S ++S PP P APP + +++QL PA P+ PQ
Sbjct: 805 SRPQSVSRPPSEPPLHPCPPPQAPPTLPGI--FVIQNQLGVPPPASNPAPTAPGPPQ--- 859
Query: 182 LHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCT 241
L+ Q Q P L P LPP S ++ +S + +S + +
Sbjct: 860 ------------PPLRPQSQPPEG-----PLPPAPHLPPSSTSSAVASSSETSSRLPA-- 900
Query: 242 PQPSNWNISSPQGLQLHDPQTGTSAPPG-----SPALLPGSPASRPSNWIISFPALK--- 293
P PS++ + P P + PP PA P P FPAL
Sbjct: 901 PTPSDFQLQFPPS---QGPHKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFPALPQPK 957
Query: 294 --LE--HQLPS--------------PQTGTSALPRVSSCRTLKLEHQLSPGSPAARS 332
LE HQ+PS PQT TS P S ++ + Q G+P A S
Sbjct: 958 ALLERFHQVPSGIILQNKAGGAPAAPQTSTSLGPLTSPAASVLVSGQAPSGTPTAPS 1014
Score = 43.9 bits (102), Expect = 2e-04
Identities = 63/282 (22%), Positives = 101/282 (35%), Gaps = 57/282 (20%)
Query: 75 PQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTT-----------RKLEHQPHS--GSPAAP 121
PQ+ T P PGL + PP + ++ QP S G +
Sbjct: 659 PQATTPQPSPGLASSPEKIVLGQPPSATPTAILTQDSLQMFLPQERSQQPLSAEGPHLSV 718
Query: 122 PSNCNISSPP-----------------GLQLHDPQTRTSAPPRVSSCKALK--------- 155
P++ +S+PP G Q D Q + P++ + LK
Sbjct: 719 PASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPS 778
Query: 156 LEHQLPAG------SP-AGRPSNWIISSPQGLQLHSPKTETVSSCKALKRQHQLPPRVSS 208
L HQ P G SP RP + S PQ + P + C Q PP +
Sbjct: 779 LPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVS-RPPSEPPLHPCPP----PQAPPTLPG 833
Query: 209 CTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPP 268
++ + +PP + P++ PP+ + P +P H P + TS+
Sbjct: 834 IFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAP-----HLPPSSTSSAV 888
Query: 269 GSPALLPGS-PASRPSNWIISFPALKLEHQLPSPQTGTSALP 309
S + PA PS++ + FP + H+ P+P +P
Sbjct: 889 ASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTPPPTLHLVP 930
Score = 43.5 bits (101), Expect = 3e-04
Identities = 65/262 (24%), Positives = 91/262 (34%), Gaps = 51/262 (19%)
Query: 69 GLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNIS 128
GLQ Q AP P T P ++S + + QP S +P A I
Sbjct: 638 GLQQPQAQQPPQAPTPQAAAPPQATTPQPSPGLASSPEKIVLGQPPSATPTA------IL 691
Query: 129 SPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTE 188
+ LQ+ PQ R+ P L E G P++ I+S+P Q +P T
Sbjct: 692 TQDSLQMFLPQERSQQP--------LSAE-----GPHLSVPASVIVSAPPPAQDPAPATP 738
Query: 189 TVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWN 248
L P+ P+ Q P P++ + P SS P
Sbjct: 739 VAKGA-------GLGPQA-------PDSQASPAPAPQIPAAAPLKGPGPSSSPSLPH--- 781
Query: 249 ISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLPSPQTGTSAL 308
+P G H P + PP P P S + PS P L H P PQ L
Sbjct: 782 -QAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSE-----PPL---HPCPPPQ-APPTL 831
Query: 309 PRVSSCRTLKLEHQLSPGSPAA 330
P + +++QL PA+
Sbjct: 832 PGI-----FVIQNQLGVPPPAS 848
Score = 40.4 bits (93), Expect = 0.003
Identities = 76/308 (24%), Positives = 116/308 (37%), Gaps = 63/308 (20%)
Query: 5 PRNLTM-------DTLVIKGLVSP--QDTVRDQRPHHPSSGAGPAGTGSFCDTCCITSLC 55
P+NLT +V+ G +P Q V Q P + A P G+ + L
Sbjct: 394 PQNLTFMAAGKAGQNVVLSGFPAPALQANVFKQPPATTTGAAPPQPPGALSKPMSVHLLN 453
Query: 56 EWIQLPELTDSSPGLQLHDPQSGTSAP-PPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPH 114
+ + P + Q+ P P +QL PQ ++ P V PH
Sbjct: 454 QGSSIV-----IPAQHMLPGQNQFLLPGAPAVQL--PQQLSALPANVGGQILAAAA--PH 504
Query: 115 SGSPA-APP--SNCNISSP--------PGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAG 163
+G A P +N N++ P P H ++AP +V ++ L AG
Sbjct: 505 TGGQLIANPILTNQNLAGPLSLGPVLAPHSGAHSAHILSAAPIQVGQPALFQMPVSLAAG 564
Query: 164 S--------PAGRPSNWII-------------SSPQGL-QLHSPKTETVSSCKALKRQH- 200
S PAG + ++ ++P GL Q +P T + L Q
Sbjct: 565 SLPTQSQPAPAGPAATTVLQGVTLPPSAVAMLNTPDGLVQPATPAAATGEAAPVLTVQPA 624
Query: 201 -QLPPRVSSCTTL---KPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWNISSPQGLQ 256
Q PP VS+ L +P+ Q PP +P ++ P + TPQPS SSP+ +
Sbjct: 625 PQAPPAVSTPLPLGLQQPQAQQPPQAPTPQAAA------PPQATTPQPSPGLASSPEKIV 678
Query: 257 LHDPQTGT 264
L P + T
Sbjct: 679 LGQPPSAT 686
Score = 37.4 bits (85), Expect = 0.023
Identities = 42/157 (26%), Positives = 57/157 (36%), Gaps = 16/157 (10%)
Query: 21 PQDTVRDQR-----PHHPSSGAGPAGTGSFCDTCCITSLCEWIQLPELTDSSPGLQLHDP 75
PQ +R Q P P+ P+ T S + TS +LP T S LQ
Sbjct: 858 PQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSS----RLPAPTPSDFQLQFPPS 913
Query: 76 QSGTSAPPPGLQLH---DPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAP----PSNCNIS 128
Q +P P LH +P PPR T P + PS +
Sbjct: 914 QGPHKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFPALPQPKALLERFHQVPSGIILQ 973
Query: 129 SPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSP 165
+ G PQT TS P S ++ + Q P+G+P
Sbjct: 974 NKAGGAPAAPQTSTSLGPLTSPAASVLVSGQAPSGTP 1010
Score = 33.1 bits (74), Expect = 0.44
Identities = 53/227 (23%), Positives = 81/227 (35%), Gaps = 24/227 (10%)
Query: 67 SPGLQLHDPQSGTSAPPPG-LQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNC 125
S GL + G P G L P T PP + T + H GSP+ +
Sbjct: 1207 SLGLPIAASSEGHRLPGHGPLSSSAPGASTQPPPHLP--TKLVIRHGGAGGSPSVTWARA 1264
Query: 126 NISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRP-SNWIISSPQGLQLHS 184
+ S +S+ S+ +L + P S P + S GL+L
Sbjct: 1265 SSSL------------SSSSSSSSAASSLDADEDGPMPSRNRPPIKTYEARSRIGLKLKI 1312
Query: 185 PKTETVSSC---KALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCT 241
+ +S AL HQ PP ++ +P + PP P + + PP ++
Sbjct: 1313 KQEAGLSKVVHNTALDPVHQPPPPPATLKVAEPPPRPPPPPPPTGQMNGTVDHPPPAAPE 1372
Query: 242 PQPSNWNISSPQ---GLQLHDPQTGTSAPPGSPA--LLPGSPASRPS 283
+P P+ + G AP G+PA GSPA P+
Sbjct: 1373 RKPLGTAPHCPRLPLRKTYRENVGGPGAPEGTPAGRARGGSPAPLPA 1419
Score = 32.3 bits (72), Expect = 0.75
Identities = 44/161 (27%), Positives = 59/161 (36%), Gaps = 24/161 (14%)
Query: 195 ALKRQHQLPPRVSSCTTLKPEHQLPPGSPA-----------AWPSSCNISSPPVSSCTPQ 243
+L Q Q P + TT+ LPP + A A P++ + PV + P
Sbjct: 565 SLPTQSQPAPAGPAATTVLQGVTLPPSAVAMLNTPDGLVQPATPAAATGEAAPVLTVQPA 624
Query: 244 PSNWNISS---PQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLPS 300
P S P GLQ Q AP A P + +PS + S P + Q PS
Sbjct: 625 PQAPPAVSTPLPLGLQQPQAQQPPQAPTPQAAAPPQATTPQPSPGLASSPEKIVLGQPPS 684
Query: 301 PQTGTSALPRVSSCRTLKLEHQLSPGSPAARSTTLTEEQPH 341
T T+ L + S L E P L+ E PH
Sbjct: 685 -ATPTAILTQDSLQMFLPQERSQQP---------LSAEGPH 715
Score = 29.3 bits (64), Expect = 6.3
Identities = 34/124 (27%), Positives = 46/124 (37%), Gaps = 28/124 (22%)
Query: 91 PQTGTSAPPRVSSCTTRKLEHQPHSGSPAAP-----PSNCNISSPPGLQLHDPQTRTSAP 145
PQT TS P S + + Q SG+P AP P+ + P L + + S
Sbjct: 983 PQTSTSLGPLTSPAASVLVSGQAPSGTPTAPSHAPAPAPMAATGLPPLLPAENKAFASNL 1042
Query: 146 PRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSCKALKRQHQLPPR 205
P ++ KA A S G+PS GLQ S LK+ L P
Sbjct: 1043 PTLNVAKA--------ASSGPGKPS--------GLQYE-------SKLSGLKKPPTLQPS 1079
Query: 206 VSSC 209
+C
Sbjct: 1080 KEAC 1083
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 47.4 bits (111), Expect = 2e-05
Identities = 61/233 (26%), Positives = 77/233 (33%), Gaps = 51/233 (21%)
Query: 82 PPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGLQLHDP--- 138
PPP L ++ TGT R+ +G P PP PP H P
Sbjct: 1163 PPPPLSVYHNGTGT----------VRRRPASEQAGPPELPPPPPPAEPPPTDLAHLPPLP 1212
Query: 139 ----QTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSCK 194
+ R A P VS L GSP + P SP+
Sbjct: 1213 PPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPG-----SPE-------- 1259
Query: 195 ALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWNISSPQG 254
+KR H PP VS P+ PP +P PV + PS SP
Sbjct: 1260 -VKRAHGTPPPVS------PKPPPPPTAPK-----------PVKAVAGLPSGSAGPSPAP 1301
Query: 255 LQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLPSPQTGTSA 307
P + PPG+P L SPA PS PAL + + P +A
Sbjct: 1302 SPARQPPAALAKPPGTPPSLGASPAKPPSP---GAPALHVPAKPPRAAAAAAA 1351
Score = 41.2 bits (95), Expect = 0.002
Identities = 64/249 (25%), Positives = 90/249 (36%), Gaps = 32/249 (12%)
Query: 92 QTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGLQLHDPQTRT---SAPPRV 148
Q + P V T + H P P + SS G H ++ PP
Sbjct: 662 QAAMTGPAEVGPTTEKPSSHLP----PTPRATTRQDSSLGGRARHMSSSQELLGDGPPGP 717
Query: 149 SSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSCKALKRQHQLPPRVSS 208
SS + E+ L G G P + G HS K +V RQ LPP S
Sbjct: 718 SSPMSRSQEYLLDEGPAPGTPPR---EARPGRHGHSIKRASVPPVPGKPRQ-VLPPGTSH 773
Query: 209 CTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPP 268
T + + PGSP A + +P + P P QL P + P
Sbjct: 774 FTPPQTPTKTRPGSPQAL-GGPHGPAPATAKVKPTP-----------QLLPP----TERP 817
Query: 269 GSPALLPGSPASRPSNWIISFPALKLEHQLPSPQTGTSALPRVSSCRTLKL--EHQLSPG 326
SP LP SP R +++ P +E ++ G + P ++ TL L E PG
Sbjct: 818 MSPRSLPQSPTHRGFAYVLPQP---VEGEVGPAAPGPAPPPVPTAVPTLCLPPEADAEPG 874
Query: 327 SPAARSTTL 335
P R+ +L
Sbjct: 875 RPKKRAHSL 883
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 47.4 bits (111), Expect = 2e-05
Identities = 66/228 (28%), Positives = 83/228 (36%), Gaps = 38/228 (16%)
Query: 61 PELTDSS----PGLQLHDPQSGTSAPPPGLQLHDP-QTGTSAPPRVSSCTTRKLEHQPHS 115
PE T S+ P L PQS PP G H P Q S P S + PH
Sbjct: 499 PECTQSTFEGFPQSPLQIPQS----PPEGENTHSPLQIVPSLPEWEDSLS-------PHY 547
Query: 116 GSPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIIS 175
P +PP + SP PQ S P Q P G + P + S
Sbjct: 548 -FPQSPPQGEDSLSPHYFPQSPPQGEDSLSPHYFP--------QSPQGEDSLSPHYFPQS 598
Query: 176 SPQGLQLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSP 235
PQG SP S + + Q L VS C++ P P ++P S S
Sbjct: 599 PPQGEDSMSPLYFPQSPLQGEEFQSSLQSPVSICSS-----STPSSLPQSFPES---SQS 650
Query: 236 PVSSCTPQPSNWNISSPQGLQLHDP-QTGTSAPPG----SPALLPGSP 278
P P + S P+G+ P Q+ SAP G SP +P SP
Sbjct: 651 PPEGPVQSPLHSPQSPPEGMHSQSPLQSPESAPEGEDSLSPLQIPQSP 698
Score = 41.2 bits (95), Expect = 0.002
Identities = 63/256 (24%), Positives = 91/256 (35%), Gaps = 41/256 (16%)
Query: 44 SFCDTCCITSLCEWIQLPELTDSSPGLQLHDPQSGTSAPPPGLQLHDP-QTGTSAPPRVS 102
S C + +SL + PE + S P + P +PP G+ P Q+ SAP
Sbjct: 630 SICSSSTPSSLPQ--SFPESSQSPPEGPVQSPLHSPQSPPEGMHSQSPLQSPESAPEGED 687
Query: 103 SCTTRKLEHQPHSGS--------PAAPPSNCNISSPPGLQLHDPQT---RTSAPPRVSSC 151
S + ++ P G P +PP + SP PQ ++S VS C
Sbjct: 688 SLSPLQIPQSPLEGEDSLSSLHFPQSPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSIC 747
Query: 152 KALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSS------CKALKRQHQLPPR 205
+ LP P S P+G SP VSS L+ H+ P
Sbjct: 748 SS-STSLSLPQSFPESPQS-----PPEG-PAQSPLQRPVSSFFSYTLASLLQSSHESP-- 798
Query: 206 VSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWNISS-PQGLQLHDPQTGT 264
Q PP PA P +SS P S+ + + +SS P ++
Sbjct: 799 -----------QSPPEGPAQSPLQSPVSSFPSSTSSSLSQSSPVSSFPSSTSSSLSKSSP 847
Query: 265 SAPPGSPALLPGSPAS 280
+P SP + S S
Sbjct: 848 ESPLQSPVISFSSSTS 863
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 45.8 bits (107), Expect = 7e-05
Identities = 72/275 (26%), Positives = 88/275 (32%), Gaps = 51/275 (18%)
Query: 28 QRPHHPSSGAGPAGTGSFCDTCCITSLCEWIQLPELTDSSPGLQLHDPQSGTSAPPPGLQ 87
+ P H S P G F +C C W Q E S G L SG + PP
Sbjct: 313 ESPSHCVSADSP--DGFFLGSCSSLDPCLWHQDTEDLMDSGGSTLSSAASGLAPYPPAAC 370
Query: 88 LHDPQT----------------GTSAPP-------RVSSCTTRKLEHQPHSGSPAAPPSN 124
L P + G PP V+SC L Q PA P S+
Sbjct: 371 LSTPYSSIPRGREKAGPMGSHQGPGPPPCQKAPSGLVTSCKAPFLVDQSQK-LPAVPASS 429
Query: 125 CNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHS 184
PPGL SAPPR A+ Q PA I +P S
Sbjct: 430 W--KPPPGLAPPQKAPAASAPPR--KAPAVPAPSQKAPAVPAPSQKAPAIPAP------S 479
Query: 185 PKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQP 244
K S+ PR +S P+ PP A PS I VS P+
Sbjct: 480 RKASAASA----------SPRKASAVPAPPQKTPPPSQKA--PSVPTIPQKAVSPTAPKK 527
Query: 245 SNWNISSPQGLQLHDPQTG---TSAPPGSPALLPG 276
+ + +P L T +PP S LPG
Sbjct: 528 KSLLLPAPSQKALPTSPTEYQMALSPPASRGKLPG 562
>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
[Homo sapiens]
Length = 1285
Score = 45.8 bits (107), Expect = 7e-05
Identities = 68/291 (23%), Positives = 101/291 (34%), Gaps = 41/291 (14%)
Query: 75 PQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQ---PHSGSPAAPPSNCNISSP- 130
P G P PG H P+ G+ +P +RKL ++ G P + + P
Sbjct: 688 PGEGRGYPSPGA--HSPRAGSISPGSPPYPQSRKLSYEIPTEEGGDRYPLPGHLASAGPL 745
Query: 131 PGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWI-ISSP----QGLQLHSP 185
+ +P + P S+ + A S PS + SSP + +
Sbjct: 746 ASAESLEPVSWREGPSGHSTLPRSPRDAPCSASSELSGPSTPLHTSSPVQGKESTRRQDT 805
Query: 186 KTETVSSCKALKRQHQLPPRVSSCTTLKPE----------------HQLPPGSPAAWPSS 229
++ T + + L LPP + T PE PP SP+ WP
Sbjct: 806 RSPTSAPTQRLSPGEALPPVSQAGTGKAPELPSGSGPEPLAPSPVSPTFPPSSPSDWPQE 865
Query: 230 CNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISF 289
SP S P + ++ GL+ H P G PP SP P +P W+++
Sbjct: 866 ---RSPGGHSDGASPRSPVPTTLPGLR-HAPWQGPRGPPDSPDGSPLTPVPSQMPWLVAS 921
Query: 290 PALKLEHQLPSPQTGTSALPRVSSCRTLKLEHQLSPGSPAARSTTLTEEQP 340
P P + T A P +S T L P P R +QP
Sbjct: 922 PE-------PPQSSPTPAFPLAASYDTNGLS---QPPLPEKRHLPGPGQQP 962
>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
[Homo sapiens]
Length = 1409
Score = 45.8 bits (107), Expect = 7e-05
Identities = 68/291 (23%), Positives = 101/291 (34%), Gaps = 41/291 (14%)
Query: 75 PQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQ---PHSGSPAAPPSNCNISSP- 130
P G P PG H P+ G+ +P +RKL ++ G P + + P
Sbjct: 812 PGEGRGYPSPGA--HSPRAGSISPGSPPYPQSRKLSYEIPTEEGGDRYPLPGHLASAGPL 869
Query: 131 PGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWI-ISSP----QGLQLHSP 185
+ +P + P S+ + A S PS + SSP + +
Sbjct: 870 ASAESLEPVSWREGPSGHSTLPRSPRDAPCSASSELSGPSTPLHTSSPVQGKESTRRQDT 929
Query: 186 KTETVSSCKALKRQHQLPPRVSSCTTLKPE----------------HQLPPGSPAAWPSS 229
++ T + + L LPP + T PE PP SP+ WP
Sbjct: 930 RSPTSAPTQRLSPGEALPPVSQAGTGKAPELPSGSGPEPLAPSPVSPTFPPSSPSDWPQE 989
Query: 230 CNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISF 289
SP S P + ++ GL+ H P G PP SP P +P W+++
Sbjct: 990 ---RSPGGHSDGASPRSPVPTTLPGLR-HAPWQGPRGPPDSPDGSPLTPVPSQMPWLVAS 1045
Query: 290 PALKLEHQLPSPQTGTSALPRVSSCRTLKLEHQLSPGSPAARSTTLTEEQP 340
P P + T A P +S T L P P R +QP
Sbjct: 1046 PE-------PPQSSPTPAFPLAASYDTNGLS---QPPLPEKRHLPGPGQQP 1086
>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
[Homo sapiens]
Length = 1419
Score = 45.8 bits (107), Expect = 7e-05
Identities = 68/291 (23%), Positives = 101/291 (34%), Gaps = 41/291 (14%)
Query: 75 PQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQ---PHSGSPAAPPSNCNISSP- 130
P G P PG H P+ G+ +P +RKL ++ G P + + P
Sbjct: 822 PGEGRGYPSPGA--HSPRAGSISPGSPPYPQSRKLSYEIPTEEGGDRYPLPGHLASAGPL 879
Query: 131 PGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWI-ISSP----QGLQLHSP 185
+ +P + P S+ + A S PS + SSP + +
Sbjct: 880 ASAESLEPVSWREGPSGHSTLPRSPRDAPCSASSELSGPSTPLHTSSPVQGKESTRRQDT 939
Query: 186 KTETVSSCKALKRQHQLPPRVSSCTTLKPE----------------HQLPPGSPAAWPSS 229
++ T + + L LPP + T PE PP SP+ WP
Sbjct: 940 RSPTSAPTQRLSPGEALPPVSQAGTGKAPELPSGSGPEPLAPSPVSPTFPPSSPSDWPQE 999
Query: 230 CNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISF 289
SP S P + ++ GL+ H P G PP SP P +P W+++
Sbjct: 1000 ---RSPGGHSDGASPRSPVPTTLPGLR-HAPWQGPRGPPDSPDGSPLTPVPSQMPWLVAS 1055
Query: 290 PALKLEHQLPSPQTGTSALPRVSSCRTLKLEHQLSPGSPAARSTTLTEEQP 340
P P + T A P +S T L P P R +QP
Sbjct: 1056 PE-------PPQSSPTPAFPLAASYDTNGLS---QPPLPEKRHLPGPGQQP 1096
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 45.8 bits (107), Expect = 7e-05
Identities = 70/302 (23%), Positives = 108/302 (35%), Gaps = 51/302 (16%)
Query: 79 TSAPPPGLQLHDP--QTGTSAPPRVSSCTTRKLEHQP----HSGSPAAPPSNCNISSPPG 132
T PPP + P + + +P R S R+ P + SP PP SPP
Sbjct: 572 TPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPP 631
Query: 133 LQL--HDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETV 190
+ H P + + P V+ ++ L + GS R S SPQ + HSP
Sbjct: 632 KRRVSHSPPPKQRSSP-VTKRRSPSLSSKHRKGSSPSR-STREARSPQPNKRHSP----- 684
Query: 191 SSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPV-----SSCTPQPS 245
S + PP V + P+ + P SP+ P +S P + +P P
Sbjct: 685 SPRPRAPQTSSSPPPVRRGASSSPQRRQSP-SPSTRPIR-RVSRTPEPKKIKKAASPSPQ 742
Query: 246 NWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLPSP---- 301
+ S P+ PP P+ P S +NW + P K + PSP
Sbjct: 743 SVRRVSSSRSVSGSPEPAAKKPPAPPS--PVQSQSPSTNWSPAVPVKKAKSPTPSPSPPR 800
Query: 302 ---QTGTSALPRVSSCRTLKLEHQ--------------------LSPGSPAARSTTLTEE 338
Q G + + K + + ++P + AA +TTL +E
Sbjct: 801 NSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVTPAAIAAATTTLAQE 860
Query: 339 QP 340
+P
Sbjct: 861 EP 862
Score = 45.8 bits (107), Expect = 7e-05
Identities = 60/239 (25%), Positives = 84/239 (35%), Gaps = 31/239 (12%)
Query: 75 PQSGTSAPPPGLQLHDP-------QTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNI 127
P+ T +PPP + P Q S P T SP+ PP
Sbjct: 577 PRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVS 636
Query: 128 SSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKT 187
SPP Q P T+ +P +L +H+ GS R S SPQ + HSP
Sbjct: 637 HSPPPKQRSSPVTKRRSP-------SLSSKHR--KGSSPSR-STREARSPQPNKRHSP-- 684
Query: 188 ETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPP-----VSSCTP 242
S + PP V + P+ + P SP+ P +S P + +P
Sbjct: 685 ---SPRPRAPQTSSSPPPVRRGASSSPQRRQSP-SPSTRPIR-RVSRTPEPKKIKKAASP 739
Query: 243 QPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLPSP 301
P + S P+ PP P+ P S +NW + P K + PSP
Sbjct: 740 SPQSVRRVSSSRSVSGSPEPAAKKPPAPPS--PVQSQSPSTNWSPAVPVKKAKSPTPSP 796
Score = 38.9 bits (89), Expect = 0.008
Identities = 61/273 (22%), Positives = 97/273 (35%), Gaps = 24/273 (8%)
Query: 77 SGTSAPPPGLQLHDPQTGTSAPPRVS-----SCTTRKLEHQPHSGSPAAPPSNCNISSPP 131
S S PP P TS+PPR + S + + H+P PA PP S P
Sbjct: 364 SSRSRSPP----KKPPKRTSSPPRKTRRLSPSASPPRRRHRP--SPPATPPPKTRHSPTP 417
Query: 132 GLQLHDPQTRTSAPPRVSSCKALKLE--HQLPAGSPAGRPSNWIIS-SPQGLQLHSPKTE 188
++R S P +S K K + + + SPA +P +S S + +
Sbjct: 418 QQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAAD 477
Query: 189 TVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQP-SNW 247
+V + +RQ+Q S ++ + + P S +P P
Sbjct: 478 SVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQ 537
Query: 248 NISSPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLPSPQTGTSA 307
+SP+G + P +PP + SPA P P + P P+ + +
Sbjct: 538 KETSPRGRRRRSP-----SPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPS 592
Query: 308 LPRVSSCRTLKLEHQLSPGSPAARSTTLTEEQP 340
R S ++ + SP P R T P
Sbjct: 593 PRRYSP----PIQRRYSPSPPPKRRTASPPPPP 621
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 45.4 bits (106), Expect = 9e-05
Identities = 81/323 (25%), Positives = 111/323 (34%), Gaps = 63/323 (19%)
Query: 61 PELTDSSP---GLQLHDPQSGTSAPPPGL---QLHDPQTGTSAPPR-------VSSCTTR 107
PEL SP GLQ P+ T+ P L L + GT+A PR S+
Sbjct: 133 PELLPRSPKPSGLQRLAPEEATALPLRRLCHLSLMEKDLGTTAHPRGFPELSHKSTAAAS 192
Query: 108 KLEHQPHSGSPAAPPSN----------------------CNISSPPGLQLHDPQTRTSAP 145
+ +P S + PP + ++ PG + DP++R +AP
Sbjct: 193 SRQSRPRVRSASLPPRTRLPSGSQAPSAAHPKRLSDLLLTSRAAAPGWRSPDPRSRLAAP 252
Query: 146 PRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSCKALKRQHQLPPR 205
P S+ L P RPS SP+ S + + K + + L PR
Sbjct: 253 PLGST--TLPSTWTAPQSRLTARPSR----SPEPQIRESEQRDPQLRRKQQRWKEPLMPR 306
Query: 206 VSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWNISSPQGLQLHDP--QTG 263
L+ LPPG P P P QP I +P H P G
Sbjct: 307 REEKYPLRGTDPLPPGQPQRIPLPGQPLQPQPILTPGQPQ--KIPTP---GQHQPILTPG 361
Query: 264 TSAP---PGSPALLPGSPASRPSNWIISFPALKLEHQLPSPQTGTSALPRVSSCRTLKLE 320
S P PG P LP P P + P +P+P + P R L+L
Sbjct: 362 HSQPIPTPGQP--LPPQPIPTPGRPLTPQP-------IPTPGRPLTPQPIQMPGRPLRLP 412
Query: 321 ---HQLSPGSPAARSTTLTEEQP 340
L PG P + T+ P
Sbjct: 413 PPLRLLRPGQPMSPQLRQTQGLP 435
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 45.1 bits (105), Expect = 1e-04
Identities = 77/306 (25%), Positives = 113/306 (36%), Gaps = 50/306 (16%)
Query: 63 LTDSSPGLQLHDPQSGTSAP-PPGLQLHDPQTG--TSAPPRVSS-CTTRKLEHQPHSGSP 118
LT P +P G + PP L + G TSA +SS + + L+ + S
Sbjct: 1976 LTGLGPACPTREPPLGAAGDWPPCLSTKEAAAGRNTSAEKELSSPISPKSLQSDTPTFSY 2035
Query: 119 AAPPSNCNISSP-PGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSP 177
AA P PG + T + PPR + + P+ + I+S
Sbjct: 2036 AALAGPTVPPRPEPGPSMEPSLTPPAVPPRAP----------ILSKGPSPPLNGNILSCS 2085
Query: 178 QGLQLHSPKT-------ETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSC 230
+ SPK ++ S + K + P + + + P H +P GSP WP +
Sbjct: 2086 PDRRSPSPKESGRSHWDDSTSDSELEKGAREQPEKEAQSPS--PPHPIPMGSPTLWPETE 2143
Query: 231 NISSPPVSS--CTPQPS--------NWNISSPQGLQLHDPQTGTSAPPGS--------PA 272
SPP+ S +PS ++ P QL P SAP GS A
Sbjct: 2144 AHVSPPLDSHLGPARPSLDFPASAFGFSSLQPAPPQLPSPAEPRSAPCGSLAFSGDRALA 2203
Query: 273 LLPGSPA-SRPSNWIISFPALKLEHQLPSPQTGTSALPRVSSCRTLKLEHQLSPGSPAAR 331
L PG P +R ++ A L+ LP LP SS L + P SPA
Sbjct: 2204 LAPGPPTRTRHDEYLEVTKAPSLDSSLPQ-------LPSPSSPGAPLLSNLPRPASPALS 2256
Query: 332 STTLTE 337
+ +E
Sbjct: 2257 EGSSSE 2262
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 44.7 bits (104), Expect = 1e-04
Identities = 59/235 (25%), Positives = 86/235 (36%), Gaps = 54/235 (22%)
Query: 95 TSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNIS---------------SPPGLQLHDPQ 139
TS S+ + + +P + SP PS ++S SP G+
Sbjct: 263 TSLTKMDSTASITRTPSRPSTASPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTSL 322
Query: 140 TRTSAPPRVSSCKALKLEHQLPA-GSPAGRPSNWIISSPQGLQLH-----SPKTETVSSC 193
T+ + +S + P+ SP G+PS +SP G SP T +++
Sbjct: 323 TKMDSTASISRTPPRASITRTPSRASPTGKPST---ASPTGTPSRASPTGSPSTASLTGL 379
Query: 194 KALKRQHQLPPRVS-------SCTTLKPEHQLPPG--------------SPAAWPSSCN- 231
+ PPR S + T KP P G SP P +
Sbjct: 380 SSTASPTGTPPRASPTGTPSTASLTRKPPRASPTGMLSRTSITKMDSTASPTRTPPRASP 439
Query: 232 ISSPPVSSCTPQPSNWNISSPQGLQLHDPQTG---TSAPPGSPALLPGSPASRPS 283
+PP +S T PS +SP G Q TG T++P GSP+ SP PS
Sbjct: 440 TGTPPRASPTGTPSR---ASPTGTQSTASPTGSPSTASPTGSPS--TASPTGSPS 489
Score = 40.0 bits (92), Expect = 0.004
Identities = 66/265 (24%), Positives = 95/265 (35%), Gaps = 46/265 (17%)
Query: 95 TSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKAL 154
T PPR S + P + P + I +PP +RTS S+
Sbjct: 221 TGTPPRASPTGS-----PPRASLSMMPSTALLIRTPPRASPTGMLSRTSLTKMDSTASIT 275
Query: 155 KLEHQLPAGSPAGRPSNWIIS---------------SPQGLQLHSPKTETVSSCKALKRQ 199
+ + SP G PS +S SP G+ + T+ S+
Sbjct: 276 RTPSRPSTASPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDSTASI---- 331
Query: 200 HQLPPRVSSCTTLKPEHQLPPG-----SPAAWPSSCN-ISSPPVSSCTPQPSNWNISSPQ 253
+ PPR S T P P G SP PS + SP +S T S +SP
Sbjct: 332 SRTPPRAS--ITRTPSRASPTGKPSTASPTGTPSRASPTGSPSTASLTGLSST---ASPT 386
Query: 254 GLQLHDPQTGTSAPPGSPALLPGSPASRPSNWIISFPALKLEHQLPSPQTGTSALPRVSS 313
G TGT P + +L P + P+ + K++ S + T PR S
Sbjct: 387 GTPPRASPTGT---PSTASLTRKPPRASPTGMLSRTSITKMD----STASPTRTPPRASP 439
Query: 314 CRTLKLEHQLSP-GSPAARSTTLTE 337
T + SP G+P+ S T T+
Sbjct: 440 TGT---PPRASPTGTPSRASPTGTQ 461
Score = 40.0 bits (92), Expect = 0.004
Identities = 62/242 (25%), Positives = 88/242 (36%), Gaps = 49/242 (20%)
Query: 81 APPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGLQLHDPQT 140
A P G TGT P R S T+ S S A+P + + +SP G T
Sbjct: 437 ASPTGTPPRASPTGT--PSRASPTGTQSTASPTGSPSTASPTGSPSTASPTGSPSRASLT 494
Query: 141 RTSAPPRVSSCKALKLEHQLPA-GSPAGRPSNWIISSPQG-----LQLHSPKTETVSSCK 194
RT + ++ ++ + P+ SP PS +SP G L + SP ++
Sbjct: 495 RTPSRASLTKMESTASITRTPSRASPTWTPST---ASPTGSPSTALAMGSPSRAALTRTP 551
Query: 195 ALKRQHQLPPRVSSCT---------------TLKPEHQLPPG-----SPAAWPSSCNIS- 233
+ + P R S T T P P G SP PSS ++
Sbjct: 552 SRASLTRTPSRASLTTPSRASLTRTPSTVLLTRMPPSASPTGMPSRTSPTGMPSSALLTK 611
Query: 234 ---------SPPVSSCTPQPSNWNISSPQGLQLHDPQTGT---SAPPGSPALLPGSPASR 281
+PP +S T P +SP G TGT ++P G+P SP
Sbjct: 612 MDSTASITRTPPRASPTETPPR---ASPTGTPPRASPTGTPPRASPTGTPP--RASPTGT 666
Query: 282 PS 283
PS
Sbjct: 667 PS 668
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 44.7 bits (104), Expect = 1e-04
Identities = 66/261 (25%), Positives = 95/261 (36%), Gaps = 27/261 (10%)
Query: 77 SGTSAPPPGL-QLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGLQL 135
SG S PP L + P+ G + P R + P +PA P S+ +
Sbjct: 798 SGPSPEPPPLDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASD--------TEE 849
Query: 136 HDPQTRTSAPPRVSSCKALKLEHQ-----LPAGSPAGRPSNWIISSPQGLQLHSPKTETV 190
+P + P R SS + L + PAG P P GL + +++TV
Sbjct: 850 EEPGPEGTPPSRGSSGEGLPFAEEGNLTIKQRPKPAGPPPR-ETPVPPGLDFNLTESDTV 908
Query: 191 SSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWNIS 250
+ + L + + PG A PS SPP SS PQP ++
Sbjct: 909 KRRPKCREREPLQTALLAFGVA----SATPGPAAPLPSPTPGESPPASS-LPQPEPSSLP 963
Query: 251 SPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWI-ISFPALKLEHQLPSPQTGTSALP 309
+ QG+ + PP P PG +S S W + P L P GT+ P
Sbjct: 964 A-QGVPTPLAPSPAMQPPVPPCPGPGLESSAASRWNGETEPPAAPAALLKVPGAGTAPKP 1022
Query: 310 RVSSCRTL-----KLEHQLSP 325
+C L KL +L P
Sbjct: 1023 VSVACTQLAFSGPKLAPRLGP 1043
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 44.7 bits (104), Expect = 1e-04
Identities = 66/261 (25%), Positives = 95/261 (36%), Gaps = 27/261 (10%)
Query: 77 SGTSAPPPGL-QLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGLQL 135
SG S PP L + P+ G + P R + P +PA P S+ +
Sbjct: 880 SGPSPEPPPLDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASD--------TEE 931
Query: 136 HDPQTRTSAPPRVSSCKALKLEHQ-----LPAGSPAGRPSNWIISSPQGLQLHSPKTETV 190
+P + P R SS + L + PAG P P GL + +++TV
Sbjct: 932 EEPGPEGTPPSRGSSGEGLPFAEEGNLTIKQRPKPAGPPPR-ETPVPPGLDFNLTESDTV 990
Query: 191 SSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWNIS 250
+ + L + + PG A PS SPP SS PQP ++
Sbjct: 991 KRRPKCREREPLQTALLAFGVA----SATPGPAAPLPSPTPGESPPASS-LPQPEPSSLP 1045
Query: 251 SPQGLQLHDPQTGTSAPPGSPALLPGSPASRPSNWI-ISFPALKLEHQLPSPQTGTSALP 309
+ QG+ + PP P PG +S S W + P L P GT+ P
Sbjct: 1046 A-QGVPTPLAPSPAMQPPVPPCPGPGLESSAASRWNGETEPPAAPAALLKVPGAGTAPKP 1104
Query: 310 RVSSCRTL-----KLEHQLSP 325
+C L KL +L P
Sbjct: 1105 VSVACTQLAFSGPKLAPRLGP 1125
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 43.9 bits (102), Expect = 2e-04
Identities = 57/222 (25%), Positives = 77/222 (34%), Gaps = 23/222 (10%)
Query: 61 PELTDSSPGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAA 120
P L P L H PQ + PP L H +PP + + ++ +P + + A
Sbjct: 826 PILHLPQPELPPHLPQPPEHSTPPHLNQH----AVVSPPALHNALPQQ-PSRPSNRAAAL 880
Query: 121 PPSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGL 180
PP PP + QT P ++ + LE + P P + Q L
Sbjct: 881 PPKPAR---PPAVSPALTQTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYL--QQL 935
Query: 181 QLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQL-----PPGSPAAWPSSCNISSP 235
Q P T + S K Q Q PP + + QL PP P P P
Sbjct: 936 QKVQPPTPLLPSVKV---QSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQP 992
Query: 236 PVSSCTPQPSNWNIS-----SPQGLQLHDPQTGTSAPPGSPA 272
P QP ++ PQG Q P G PP PA
Sbjct: 993 PPRPVHLQPMQFSTHIQQPPPPQGQQPPHPPPGQQPPPPQPA 1034
Score = 32.7 bits (73), Expect = 0.57
Identities = 51/203 (25%), Positives = 77/203 (37%), Gaps = 52/203 (25%)
Query: 122 PSNCNISSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQ 181
P+ S+PP Q P PP V + H PA +P + I+ +P
Sbjct: 197 PNTTQASTPPQTQTPQPN-----PPPVQATP-----HPFPAVTP-----DLIVQTP---- 237
Query: 182 LHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCT 241
TV + L Q PP V P PP +PA P S PP+ + T
Sbjct: 238 -----VMTVVPPQPL----QTPPPV-------PPQPQPPPAPAPQPVQ---SHPPIIAAT 278
Query: 242 PQPSNWNISSPQGLQLH-DPQTGTSAPP-GSPALLPGSPAS------RPSNWIISFPALK 293
PQP + + +G++ D T T+ P P LP P + R S+ + P
Sbjct: 279 PQP----VKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQRRESSRPVKPPKKD 334
Query: 294 L--EHQLPSPQTGTSALPRVSSC 314
+ Q P+P+ + ++ C
Sbjct: 335 VPDSQQHPAPEKSSKVSEQLKCC 357
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,388,620
Number of Sequences: 37866
Number of extensions: 1573283
Number of successful extensions: 7604
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 749
Number of HSP's that attempted gapping in prelim test: 5731
Number of HSP's gapped (non-prelim): 1874
length of query: 389
length of database: 18,247,518
effective HSP length: 104
effective length of query: 285
effective length of database: 14,309,454
effective search space: 4078194390
effective search space used: 4078194390
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.