Search of human proteins with 239741900

Search of human proteins with 239741900

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239741900 PREDICTED: hypothetical protein XP_002342343 [Homo
sapiens]
         (157 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753437 PREDICTED: hypothetical protein [Homo sapiens]           332   1e-91
gi|239748002 PREDICTED: hypothetical protein [Homo sapiens]           332   1e-91
gi|239741900 PREDICTED: hypothetical protein XP_002342343 [Homo ...   332   1e-91
gi|36949366 mutS homolog 4 [Homo sapiens]                              38   0.004
gi|13489073 egl nine homolog 1 [Homo sapiens]                          33   0.100
gi|145309324 FH2 domain containing 1 [Homo sapiens]                    33   0.100
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa...    33   0.100
gi|22779877 connexin 46 [Homo sapiens]                                 33   0.13 
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom...    32   0.17 
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom...    32   0.17 
gi|239752679 PREDICTED: hypothetical protein [Homo sapiens]            32   0.17 
gi|239747216 PREDICTED: hypothetical protein XP_002346941 [Homo ...    32   0.17 
gi|239741024 PREDICTED: hypothetical protein XP_002342070 [Homo ...    32   0.17 
gi|133922582 zinc finger protein 358 [Homo sapiens]                    32   0.17 
gi|115511030 hypothetical protein LOC115004 [Homo sapiens]             32   0.17 
gi|205277425 immunoglobulin superfamily, member 9 isoform a [Hom...    32   0.22 
gi|205277423 immunoglobulin superfamily, member 9 isoform b [Hom...    32   0.22 
gi|31317228 early growth response 3 [Homo sapiens]                     32   0.29 
gi|24497538 homeobox C4 [Homo sapiens]                                 32   0.29 
gi|24497540 homeobox C4 [Homo sapiens]                                 32   0.29 
gi|120587019 zinc finger protein 318 [Homo sapiens]                    32   0.29 
gi|122937211 KIAA0368 protein [Homo sapiens]                           32   0.29 
gi|151101459 SAPS domain family, member 1 [Homo sapiens]               31   0.38 
gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens]         31   0.49 
gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens]           31   0.49 
gi|66529407 tensin [Homo sapiens]                                      31   0.49 
gi|22027482 neuronal PAS domain protein 1 [Homo sapiens]               31   0.49 
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]         30   0.65 
gi|209969757 early growth response 2 protein isoform b [Homo sap...    30   0.84 
gi|209969755 early growth response 2 protein isoform a [Homo sap...    30   0.84 

>gi|239753437 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 157

 Score =  332 bits (850), Expect = 1e-91
 Identities = 157/157 (100%), Positives = 157/157 (100%)

Query: 1   MTINGKKGQSQCPGGPGASFTWALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTT 60
           MTINGKKGQSQCPGGPGASFTWALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTT
Sbjct: 1   MTINGKKGQSQCPGGPGASFTWALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTT 60

Query: 61  KSESLPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQGHAPWEPQNGQ 120
           KSESLPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQGHAPWEPQNGQ
Sbjct: 61  KSESLPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQGHAPWEPQNGQ 120

Query: 121 KKFPRARKHFPHRNTHVDTHPLSAGMQLASCLTHTPS 157
           KKFPRARKHFPHRNTHVDTHPLSAGMQLASCLTHTPS
Sbjct: 121 KKFPRARKHFPHRNTHVDTHPLSAGMQLASCLTHTPS 157


>gi|239748002 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 157

 Score =  332 bits (850), Expect = 1e-91
 Identities = 157/157 (100%), Positives = 157/157 (100%)

Query: 1   MTINGKKGQSQCPGGPGASFTWALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTT 60
           MTINGKKGQSQCPGGPGASFTWALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTT
Sbjct: 1   MTINGKKGQSQCPGGPGASFTWALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTT 60

Query: 61  KSESLPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQGHAPWEPQNGQ 120
           KSESLPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQGHAPWEPQNGQ
Sbjct: 61  KSESLPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQGHAPWEPQNGQ 120

Query: 121 KKFPRARKHFPHRNTHVDTHPLSAGMQLASCLTHTPS 157
           KKFPRARKHFPHRNTHVDTHPLSAGMQLASCLTHTPS
Sbjct: 121 KKFPRARKHFPHRNTHVDTHPLSAGMQLASCLTHTPS 157


>gi|239741900 PREDICTED: hypothetical protein XP_002342343 [Homo
           sapiens]
          Length = 157

 Score =  332 bits (850), Expect = 1e-91
 Identities = 157/157 (100%), Positives = 157/157 (100%)

Query: 1   MTINGKKGQSQCPGGPGASFTWALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTT 60
           MTINGKKGQSQCPGGPGASFTWALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTT
Sbjct: 1   MTINGKKGQSQCPGGPGASFTWALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTT 60

Query: 61  KSESLPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQGHAPWEPQNGQ 120
           KSESLPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQGHAPWEPQNGQ
Sbjct: 61  KSESLPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQGHAPWEPQNGQ 120

Query: 121 KKFPRARKHFPHRNTHVDTHPLSAGMQLASCLTHTPS 157
           KKFPRARKHFPHRNTHVDTHPLSAGMQLASCLTHTPS
Sbjct: 121 KKFPRARKHFPHRNTHVDTHPLSAGMQLASCLTHTPS 157


>gi|36949366 mutS homolog 4 [Homo sapiens]
          Length = 936

 Score = 37.7 bits (86), Expect = 0.004
 Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 28/135 (20%)

Query: 3   INGKKGQSQCPGGPGASFTWALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAA--RTT 60
           ++   G+++ P GP  +F       G   +P   P++    ++  S   G +GAA  R++
Sbjct: 16  VSPSSGETRSPQGPRYNF-------GLQETPQSRPSV---QVVSASTCPGTSGAAGDRSS 65

Query: 61  KSESLPAPPATSRPAA----GDKKPLQGQTL-------RRASGLQATGRAEEVKPPLA-- 107
            S SLP P   SRPA     G+K+     T+         +S  + T   + +K PL+  
Sbjct: 66  SSSSLPCPAPNSRPAQGSYFGNKRAYAENTVASNFTFGASSSSARDTNYPQTLKTPLSTG 125

Query: 108 ---HQGHAPWEPQNG 119
                G+  W PQ G
Sbjct: 126 NPQRSGYKSWTPQVG 140


>gi|13489073 egl nine homolog 1 [Homo sapiens]
          Length = 426

 Score = 33.1 bits (74), Expect = 0.100
 Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 3/68 (4%)

Query: 40  WHHHLLVQSQDRGRAGAARTTKSESLPAPP-ATSRPAAGDKKPLQGQTLR-RASGLQATG 97
           W  H LV     G  G        S PAPP A   P AG ++P +    R  ASG  A G
Sbjct: 51  WKKHKLVCQGSEGALGHGVGPHQHSGPAPPAAVPPPRAGAREPRKAAARRDNASGDAAKG 110

Query: 98  RAEEVKPP 105
           +  + KPP
Sbjct: 111 KV-KAKPP 117


>gi|145309324 FH2 domain containing 1 [Homo sapiens]
          Length = 1143

 Score = 33.1 bits (74), Expect = 0.100
 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 61  KSESLP-APPATSRPAAGDKKP--LQGQTLRRASGLQATGRAEEVKPPLAHQGH--APWE 115
           K  SLP + P  +RP     +P  ++ Q    A   QA+G  EE   P + Q H  A  +
Sbjct: 567 KFHSLPRSSPRQARPTIACLEPAEVRHQDSSFAHKPQASGGQEEAPNPPSAQAHQLAAAQ 626

Query: 116 PQNGQKKFPRARK 128
           P+N    FPRAR+
Sbjct: 627 PENHASAFPRARR 639


>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
           sapiens]
          Length = 2715

 Score = 33.1 bits (74), Expect = 0.100
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 4/68 (5%)

Query: 51  RGRAGAARTTKSESLPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQG 110
           RGRA   R  K ++ P PP    P   D  P   +T  R  G + T R  +    L  + 
Sbjct: 145 RGRAPRGRGRKHKTTPLPP----PRLADVAPTPPKTPARKRGEEGTERMVQALTELLRRA 200

Query: 111 HAPWEPQN 118
            AP  P++
Sbjct: 201 QAPQAPRS 208



 Score = 31.2 bits (69), Expect = 0.38
 Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 7/81 (8%)

Query: 7    KGQSQCPGGPGASFTWALSLRG-TALSPGELPALWHHHLLVQSQDRGRAGAARTTKSESL 65
            +GQ   P GPG      L   G  A  P +LP+     +L      G  GA    + ESL
Sbjct: 2079 RGQGTPPSGPGVVRAGVLGAAGDRARPPEDLPSEIVDFVLKNLGGPGDGGAG--PREESL 2136

Query: 66   PAPPATSRPAAGDKKPLQGQT 86
            P  P    P A   +P QG T
Sbjct: 2137 PPAP----PLANGSQPSQGLT 2153


>gi|22779877 connexin 46 [Homo sapiens]
          Length = 435

 Score = 32.7 bits (73), Expect = 0.13
 Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 23/106 (21%)

Query: 13  PGGPGASFTWALSLRGTALSPGELPALW--HHHLLVQSQDRGRAGAARTTKSESLPAPPA 70
           PG P  +  + L     A   G+   L+  HHHLL+  Q+     A R  +  +L A PA
Sbjct: 288 PGAPPPAADFKLLALTEARGKGQSAKLYNGHHHLLMTEQNWANQAAER--QPPALKAYPA 345

Query: 71  TSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQGHAPWEP 116
            S PAA    P+   +                 PPLAH+  A   P
Sbjct: 346 ASTPAA--PSPVGSSS-----------------PPLAHEAEAGAAP 372


>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
           sapiens]
          Length = 1487

 Score = 32.3 bits (72), Expect = 0.17
 Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 10/80 (12%)

Query: 5   GKKGQSQCPGGPGASFTWALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTTKSES 64
           GK G+   PG PG        LRG     GE  A         + +RG  GA   +  + 
Sbjct: 615 GKAGEKGLPGAPG--------LRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQG 666

Query: 65  LPAPPATSRPAAGDKKPLQG 84
           LP PP    P  G K   QG
Sbjct: 667 LPGPPGP--PGEGGKPGDQG 684


>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
           sapiens]
          Length = 1418

 Score = 32.3 bits (72), Expect = 0.17
 Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 10/80 (12%)

Query: 5   GKKGQSQCPGGPGASFTWALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTTKSES 64
           GK G+   PG PG        LRG     GE  A         + +RG  GA   +  + 
Sbjct: 546 GKAGEKGLPGAPG--------LRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQG 597

Query: 65  LPAPPATSRPAAGDKKPLQG 84
           LP PP    P  G K   QG
Sbjct: 598 LPGPPGP--PGEGGKPGDQG 615


>gi|239752679 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score = 32.3 bits (72), Expect = 0.17
 Identities = 35/121 (28%), Positives = 48/121 (39%), Gaps = 17/121 (14%)

Query: 5   GKKGQSQCPGGPGASFTWALSL-----RGTALSPGEL--PALWHHHLLVQSQDRGRAGAA 57
           G++G+    G  G   +W L        G  L PG +      H HL V     GR GA 
Sbjct: 119 GRRGE----GRAGFGSSWGLGQSCLGHEGGRLVPGPVGPSGSRHLHLPVDPLHSGRPGAP 174

Query: 58  RTTKSESLPAPPATSRPAAGDKKPLQGQTLR-RASGLQATGRAEEVK-----PPLAHQGH 111
              +     + P T +P    ++P Q   LR RA GL       E+K     P +A +G 
Sbjct: 175 HRGRDPRWLSTPKTPQPGRPGRRPRQEPELRPRAQGLTGGQVHGELKHGYQYPGMASEGA 234

Query: 112 A 112
           A
Sbjct: 235 A 235


>gi|239747216 PREDICTED: hypothetical protein XP_002346941 [Homo
           sapiens]
          Length = 245

 Score = 32.3 bits (72), Expect = 0.17
 Identities = 35/121 (28%), Positives = 48/121 (39%), Gaps = 17/121 (14%)

Query: 5   GKKGQSQCPGGPGASFTWALSL-----RGTALSPGEL--PALWHHHLLVQSQDRGRAGAA 57
           G++G+    G  G   +W L        G  L PG +      H HL V     GR GA 
Sbjct: 119 GRRGE----GRAGFGSSWGLGQSCLGHEGGRLVPGPVGPSGSRHLHLPVDPLHSGRPGAP 174

Query: 58  RTTKSESLPAPPATSRPAAGDKKPLQGQTLR-RASGLQATGRAEEVK-----PPLAHQGH 111
              +     + P T +P    ++P Q   LR RA GL       E+K     P +A +G 
Sbjct: 175 HRGRDPRWLSTPKTPQPGRPGRRPRQEPELRPRAQGLTGGQVHGELKHGYQYPGMASEGA 234

Query: 112 A 112
           A
Sbjct: 235 A 235


>gi|239741024 PREDICTED: hypothetical protein XP_002342070 [Homo
           sapiens]
          Length = 245

 Score = 32.3 bits (72), Expect = 0.17
 Identities = 35/121 (28%), Positives = 48/121 (39%), Gaps = 17/121 (14%)

Query: 5   GKKGQSQCPGGPGASFTWALSL-----RGTALSPGEL--PALWHHHLLVQSQDRGRAGAA 57
           G++G+    G  G   +W L        G  L PG +      H HL V     GR GA 
Sbjct: 119 GRRGE----GRAGFGSSWGLGQSCLGHEGGRLVPGPVGPSGSRHLHLPVDPLHSGRPGAP 174

Query: 58  RTTKSESLPAPPATSRPAAGDKKPLQGQTLR-RASGLQATGRAEEVK-----PPLAHQGH 111
              +     + P T +P    ++P Q   LR RA GL       E+K     P +A +G 
Sbjct: 175 HRGRDPRWLSTPKTPQPGRPGRRPRQEPELRPRAQGLTGGQVHGELKHGYQYPGMASEGA 234

Query: 112 A 112
           A
Sbjct: 235 A 235


>gi|133922582 zinc finger protein 358 [Homo sapiens]
          Length = 568

 Score = 32.3 bits (72), Expect = 0.17
 Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 15/92 (16%)

Query: 60  TKSESLPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQGHAPWEPQNG 119
           T    LPAP +  RP +    P  G+  RR+SGL    R         H G  P+   + 
Sbjct: 136 TSPAVLPAPASPPRPFSC---PDCGRAFRRSSGLSQHRR--------THSGEKPYRCPDC 184

Query: 120 QKKFPRARKHFPHRNTHVDTHPLSAGMQLASC 151
            K F        HR  H    P     Q A+C
Sbjct: 185 GKSFSHGATLAQHRGIHTGARP----YQCAAC 212


>gi|115511030 hypothetical protein LOC115004 [Homo sapiens]
          Length = 522

 Score = 32.3 bits (72), Expect = 0.17
 Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 12/113 (10%)

Query: 4   NGKKGQSQCPGGPGASFTWALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTTKS- 62
           +GK  Q     G  A    A + RG  + P E PA     L       G+ G AR + S 
Sbjct: 5   HGKAMQRASEAGATAPKASARNARGAPMDPTESPAAPEAAL----PKAGKFGPARKSGSR 60

Query: 63  ------ESLPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQ 109
                 ++   PP  +  A   K P + Q  + +    A G AE ++PP A +
Sbjct: 61  QKKSAPDTQERPPVRATGARAKKAPQRAQDTQPSDATSAPG-AEGLEPPAARE 112


>gi|205277425 immunoglobulin superfamily, member 9 isoform a [Homo
            sapiens]
          Length = 1179

 Score = 32.0 bits (71), Expect = 0.22
 Identities = 30/82 (36%), Positives = 33/82 (40%), Gaps = 13/82 (15%)

Query: 22   WALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTTKSESLPAPPATSRPAAGD-KK 80
            W L  R   L PG LPA     L  QS  RG A   R         PP+T+  A G    
Sbjct: 1002 WTLRER---LLPGLLPAAPRGSLTSQSSGRGSASFLR---------PPSTAPSAGGSYLS 1049

Query: 81   PLQGQTLRRASGLQATGRAEEV 102
            P  G T   ASG +   R E V
Sbjct: 1050 PAPGDTSSWASGPERWPRREHV 1071


>gi|205277423 immunoglobulin superfamily, member 9 isoform b [Homo
            sapiens]
          Length = 1163

 Score = 32.0 bits (71), Expect = 0.22
 Identities = 30/82 (36%), Positives = 33/82 (40%), Gaps = 13/82 (15%)

Query: 22   WALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTTKSESLPAPPATSRPAAGD-KK 80
            W L  R   L PG LPA     L  QS  RG A   R         PP+T+  A G    
Sbjct: 986  WTLRER---LLPGLLPAAPRGSLTSQSSGRGSASFLR---------PPSTAPSAGGSYLS 1033

Query: 81   PLQGQTLRRASGLQATGRAEEV 102
            P  G T   ASG +   R E V
Sbjct: 1034 PAPGDTSSWASGPERWPRREHV 1055


>gi|31317228 early growth response 3 [Homo sapiens]
          Length = 387

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 14/87 (16%)

Query: 64  SLPAPPATSRPAAGDK---KPLQGQTLRRASGLQATG------RAEEVKPPLA-HQGHAP 113
           SLP PP T +P    K   +P +     R     A G      R++E+   L  H GH P
Sbjct: 245 SLPQPPLTLKPIRPRKYPNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKP 304

Query: 114 WEPQNGQKKFPRARKHFPHRNTHVDTH 140
           ++ +   + F R+     H  TH+ TH
Sbjct: 305 FQCRICMRSFSRS----DHLTTHIRTH 327


>gi|24497538 homeobox C4 [Homo sapiens]
          Length = 264

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 6/64 (9%)

Query: 25  SLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTTKSESLPAPPATSRPA------AGD 78
           SL+G   S G  PA   HH   +SQ            +   PAPPA S+PA      A  
Sbjct: 71  SLQGPGNSRGHGPAQAGHHHPEKSQSLCEPAPLSGASASPSPAPPACSQPAPDHPSSAAS 130

Query: 79  KKPL 82
           K+P+
Sbjct: 131 KQPI 134


>gi|24497540 homeobox C4 [Homo sapiens]
          Length = 264

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 6/64 (9%)

Query: 25  SLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTTKSESLPAPPATSRPA------AGD 78
           SL+G   S G  PA   HH   +SQ            +   PAPPA S+PA      A  
Sbjct: 71  SLQGPGNSRGHGPAQAGHHHPEKSQSLCEPAPLSGASASPSPAPPACSQPAPDHPSSAAS 130

Query: 79  KKPL 82
           K+P+
Sbjct: 131 KQPI 134


>gi|120587019 zinc finger protein 318 [Homo sapiens]
          Length = 2279

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 51  RGRAGAARTTKSESLPAPP--ATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAH 108
           R    ++   +  S P PP  ++SR  A   +   G   RRAS     GR     PP A 
Sbjct: 27  RSSGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRGRRASPSPPRGRRVSPSPPRAR 86

Query: 109 QGHAPWEPQNGQKKFP 124
           +G     P  G++ FP
Sbjct: 87  RGSP--SPPRGRRLFP 100


>gi|122937211 KIAA0368 protein [Homo sapiens]
          Length = 2017

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%)

Query: 32  SPGEL-PALWHHHLLVQSQDRGRAGAARTTKSESLPAPPATSRPAAGDKKPLQGQTLRRA 90
           SPG L PA    H L ++  RG A   RT +S +L +     RP  GD+  L+ +   RA
Sbjct: 95  SPGPLGPA---PHGLRRAAPRGPA--RRTPRSTALTSRRRAQRPRHGDRLRLRSEARPRA 149

Query: 91  SGLQATGRAEEVKPPLAHQ 109
           +G     R   V+P   H+
Sbjct: 150 AGDWPCARGGAVRPGRPHR 168


>gi|151101459 SAPS domain family, member 1 [Homo sapiens]
          Length = 881

 Score = 31.2 bits (69), Expect = 0.38
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 60  TKSESLPAPPATSRPAAGDKKPLQ---GQTLRRASGLQATGRAEEVKPPLAHQGHAPWEP 116
           + S+S    P+TS PA+G  +P Q   G+      GL  +  A+ + PP    G AP  P
Sbjct: 816 SSSDSATRDPSTSVPASGAHQPPQTTEGEKSPEPLGLPQSQSAQALTPPPIPNGSAPEGP 875


>gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens]
          Length = 978

 Score = 30.8 bits (68), Expect = 0.49
 Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 8/77 (10%)

Query: 28  GTALSPGELPALWHHHLLVQSQDRGRAGAARTTKSESL------PAPPATSRPAAGDKKP 81
           G +  PG +PA   H+LL       R G    T + SL      P PP  SR       P
Sbjct: 446 GASSLPGLMPA--QHYLLRARYASARGGGTSPTAASSLDRIGGLPMPPWRSRAEYPGYNP 503

Query: 82  LQGQTLRRASGLQATGR 98
             G T R +   QA  R
Sbjct: 504 NAGVTRRASDPAQAADR 520


>gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens]
          Length = 1106

 Score = 30.8 bits (68), Expect = 0.49
 Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 8/77 (10%)

Query: 28  GTALSPGELPALWHHHLLVQSQDRGRAGAARTTKSESL------PAPPATSRPAAGDKKP 81
           G +  PG +PA   H+LL       R G    T + SL      P PP  SR       P
Sbjct: 574 GASSLPGLMPA--QHYLLRARYASARGGGTSPTAASSLDRIGGLPMPPWRSRAEYPGYNP 631

Query: 82  LQGQTLRRASGLQATGR 98
             G T R +   QA  R
Sbjct: 632 NAGVTRRASDPAQAADR 648


>gi|66529407 tensin [Homo sapiens]
          Length = 1735

 Score = 30.8 bits (68), Expect = 0.49
 Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 5/102 (4%)

Query: 43  HLLVQSQDRGRAGAARTTKSESLPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEV 102
           H L  S D G + A+  T     P P A+S  AA    P + + L R   L   G   E 
Sbjct: 398 HTLSVSSDSGNSTASTKTDKTDEPVPGASSATAA--LSPQEKRELDRL--LSGFGLEREK 453

Query: 103 KPPLAHQGHAPWEPQNGQKKFPRARKHFPHRNTHVDTHPLSA 144
           +  + H  H    P  G    P + +H      HV+   L++
Sbjct: 454 QGAMYHTQHLRSRPAGG-SAVPSSGRHVVPAQVHVNGGALAS 494


>gi|22027482 neuronal PAS domain protein 1 [Homo sapiens]
          Length = 590

 Score = 30.8 bits (68), Expect = 0.49
 Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 19/101 (18%)

Query: 20  FTWALSLR---GTALSPGELPALWHHHLLVQSQ------DRGRAGAARTTKSESLPAPPA 70
           F W  S+    G+  SPGE   LW  H+L Q++      D  +  A+   +  S P P  
Sbjct: 377 FVWLQSVATVAGSGKSPGEHHVLWVSHVLSQAEGGQTPLDAFQLPASVACEEASSPGPEP 436

Query: 71  T----------SRPAAGDKKPLQGQTLRRASGLQATGRAEE 101
           T          + PA  +    QG+ ++   G + T  +E+
Sbjct: 437 TEPEPPTEGKQAAPAENEAPQTQGKRIKVEPGPRETKGSED 477


>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
          Length = 1682

 Score = 30.4 bits (67), Expect = 0.65
 Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 13/138 (9%)

Query: 2    TINGKKGQSQCPGGPGASFTWALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTTK 61
            ++ GKK + + PG PG S    L LR  +LS G    L    + V+S D+    A+   +
Sbjct: 1068 SVPGKKAREEAPGPPGVSRADMLKLR--SLSEGPPKELKIRLIKVESGDKETFIASEVEE 1125

Query: 62   SESLPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQGHAPWEPQNGQK 121
                 A    S  AA   +  +   ++          A+ VKP +           N ++
Sbjct: 1126 RRLRMADLTISHCAADVVRASRNAKVKGKFRESYLSPAQSVKPKI-----------NTEE 1174

Query: 122  KFPRARKHFPHRNTHVDT 139
            K PR + + P  + ++++
Sbjct: 1175 KLPREKLNPPTPSIYLES 1192



 Score = 26.6 bits (57), Expect = 9.3
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 6/64 (9%)

Query: 46   VQSQDRGRA--GAARTTKSESLPAPPATSRPAAGDKKP---LQGQTLR-RASGLQATGRA 99
            +Q +++ R   G A   K  + PAPP+   P+A    P   + G+  R  A G     RA
Sbjct: 1028 IQGREKSRPDLGGASKAKPPTAPAPPSAPAPSAQPTPPSASVPGKKAREEAPGPPGVSRA 1087

Query: 100  EEVK 103
            + +K
Sbjct: 1088 DMLK 1091


>gi|209969757 early growth response 2 protein isoform b [Homo
           sapiens]
          Length = 426

 Score = 30.0 bits (66), Expect = 0.84
 Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 27/136 (19%)

Query: 5   GKKGQSQCPGGPGASFTWALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTTKSES 64
           G  G S+ P  PG+S   A +    A +P        HHL ++   R R    R +K+  
Sbjct: 234 GASGGSEGPRLPGSSSAAAAAAAAAAYNP--------HHLPLRPILRPRKYPNRPSKT-- 283

Query: 65  LPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQGHAPWEPQNGQKKFP 124
               P   RP      P +G   R +   + T           H GH P++ +   + F 
Sbjct: 284 ----PVHERPYPC---PAEGCDRRFSRSDELTRHIR------IHTGHKPFQCRICMRNFS 330

Query: 125 RARKHFPHRNTHVDTH 140
           R+     H  TH+ TH
Sbjct: 331 RS----DHLTTHIRTH 342


>gi|209969755 early growth response 2 protein isoform a [Homo
           sapiens]
          Length = 476

 Score = 30.0 bits (66), Expect = 0.84
 Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 27/136 (19%)

Query: 5   GKKGQSQCPGGPGASFTWALSLRGTALSPGELPALWHHHLLVQSQDRGRAGAARTTKSES 64
           G  G S+ P  PG+S   A +    A +P        HHL ++   R R    R +K+  
Sbjct: 284 GASGGSEGPRLPGSSSAAAAAAAAAAYNP--------HHLPLRPILRPRKYPNRPSKT-- 333

Query: 65  LPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQGHAPWEPQNGQKKFP 124
               P   RP      P +G   R +   + T           H GH P++ +   + F 
Sbjct: 334 ----PVHERPYPC---PAEGCDRRFSRSDELTRHIR------IHTGHKPFQCRICMRNFS 380

Query: 125 RARKHFPHRNTHVDTH 140
           R+     H  TH+ TH
Sbjct: 381 RS----DHLTTHIRTH 392


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.129    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,648,250
Number of Sequences: 37866
Number of extensions: 374457
Number of successful extensions: 2865
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 2614
Number of HSP's gapped (non-prelim): 367
length of query: 157
length of database: 18,247,518
effective HSP length: 94
effective length of query: 63
effective length of database: 14,688,114
effective search space: 925351182
effective search space used: 925351182
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.