MSH4 26544

Name: MSH4	Sequence: fasta or formatted (936aa)		NCBI GI: 36949366
Description: mutS homolog 4		Referenced in: DNases, Recombination, and DNA Repair Spindle, M phase, and Meiosis
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 63 2 C cysteine 2.0 19 1 D aspartate 3.7 35 3 E glutamate 6.6 62 2 F phenylalanine 3.6 34 2 G glycine 4.3 40 2 H histidine 1.5 14 1 I isoleucine 7.6 71 2 K lysine 5.9 55 3 L leucine 9.8 92 2 M methionine 2.4 22 1 N asparagine 5.3 50 2 P proline 4.4 41 2 Q glutamine 4.6 43 1 R arginine 4.5 42 2 S serine 10.3 96 6 T threonine 7.4 69 2 V valine 4.7 44 2 W tryptophan 0.2 2 1 Y tyrosine 4.5 42 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mutS homolog 4 MSH3 0.121 mutS homolog 3 MSH2 0.100 mutS homolog 2 MSH5 0.065 mutS homolog 5 isoform c MSH5 0.065 mutS homolog 5 isoform a MSH5 0.065 mutS homolog 5 isoform c MSH5 0.063 mutS homolog 5 isoform b MSH6 0.057 mutS homolog 6 ZYX 0.012 zyxin ZYX 0.012 zyxin TNRC18 0.010 trinucleotide repeat containing 18 APC 0.009 adenomatous polyposis coli APC 0.009 adenomatous polyposis coli APC 0.009 adenomatous polyposis coli NUP153 0.009 nucleoporin 153kDa POLR2A 0.008 DNA-directed RNA polymerase II A MUC17 0.008 mucin 17 LOC100292691 0.007 PREDICTED: hypothetical protein LOC100289669 0.007 PREDICTED: hypothetical protein LOC100289669 0.007 PREDICTED: hypothetical protein XP_002342343 SRRM2 0.007 splicing coactivator subunit SRm300 C13orf23 0.007 hypothetical protein LOC80209 isoform 2 C13orf23 0.007 hypothetical protein LOC80209 isoform 1 ATXN7 0.007 ataxin 7 isoform b ATXN7 0.007 ataxin 7 isoform a SUPT5H 0.007 suppressor of Ty 5 homolog isoform b SUPT5H 0.007 suppressor of Ty 5 homolog isoform a SUPT5H 0.007 suppressor of Ty 5 homolog isoform a SUPT5H 0.007 suppressor of Ty 5 homolog isoform a BIN1 0.006 bridging integrator 1 isoform 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.