| Name: LOC100289565 | Sequence: fasta or formatted (168aa) | NCBI GI: 239741359 | |
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Description: PREDICTED: hypothetical protein XP_002342184
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 13.1 22 2 C cysteine 1.2 2 1 D aspartate 0.6 1 1 E glutamate 6.0 10 1 F phenylalanine 1.2 2 1 G glycine 14.3 24 2 H histidine 2.4 4 1 I isoleucine 3.0 5 1 K lysine 1.8 3 1 L leucine 10.1 17 2 M methionine 1.2 2 1 N asparagine 0.6 1 1 P proline 15.5 26 4 Q glutamine 1.8 3 1 R arginine 10.1 17 2 S serine 6.0 10 1 T threonine 3.0 5 2 V valine 4.8 8 1 W tryptophan 3.0 5 1 Y tyrosine 0.6 1 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342184 LOC646509 0.052 PREDICTED: hypothetical protein COL5A2 0.052 alpha 2 type V collagen preproprotein COL1A2 0.048 alpha 2 type I collagen COL5A3 0.048 collagen, type V, alpha 3 preproprotein COL5A1 0.045 alpha 1 type V collagen preproprotein LOC100292723 0.042 PREDICTED: hypothetical protein LOC100131098 0.042 PREDICTED: hypothetical protein COL4A2 0.042 alpha 2 type IV collagen preproprotein LOC643153 0.039 PREDICTED: hypothetical protein LOC645321 0.039 PREDICTED: hypothetical protein LOC643153 0.039 PREDICTED: hypothetical protein LOC645321 0.039 PREDICTED: hypothetical protein LOC643153 0.039 PREDICTED: hypothetical protein COL1A1 0.036 alpha 1 type I collagen preproprotein COL11A1 0.036 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.036 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.036 alpha 1 type XI collagen isoform A preproprotein [Ho... LOC100290783 0.036 PREDICTED: hypothetical protein XP_002347614 LOC100288864 0.036 PREDICTED: hypothetical protein XP_002343435 GRIN2D 0.036 N-methyl-D-aspartate receptor subunit 2D precursor ... LMTK3 0.036 lemur tyrosine kinase 3 DIAPH1 0.036 diaphanous 1 isoform 2 DIAPH1 0.036 diaphanous 1 isoform 1 FHDC1 0.036 FH2 domain containing 1 C1QTNF7 0.033 C1q and tumor necrosis factor related protein 7 isof... C1QTNF7 0.033 C1q and tumor necrosis factor related protein 7 iso... C1QTNF7 0.033 C1q and tumor necrosis factor related protein 7 iso... SOBP 0.033 sine oculis binding protein homolog HCN4 0.033 hyperpolarization activated cyclic nucleotide-gated p...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
