LOC643153 1228

Name: LOC643153	Sequence: fasta or formatted (215aa)		NCBI GI: 113423437
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt mRNA {215aa} PREDICTED: hypothetical protein alt mRNA {215aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.0 30 4 C cysteine 1.9 4 1 D aspartate 1.9 4 1 E glutamate 3.3 7 1 F phenylalanine 1.9 4 1 G glycine 11.2 24 1 H histidine 0.9 2 1 I isoleucine 1.9 4 2 K lysine 2.8 6 2 L leucine 4.2 9 2 M methionine 1.4 3 1 N asparagine 0.5 1 1 P proline 15.3 33 7 Q glutamine 3.3 7 1 R arginine 15.8 34 3 S serine 7.0 15 2 T threonine 5.1 11 1 V valine 5.1 11 1 W tryptophan 2.8 6 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC643153 1.000 PREDICTED: hypothetical protein LOC643153 1.000 PREDICTED: hypothetical protein SYNPO 0.059 synaptopodin isoform A LOC100293933 0.049 PREDICTED: hypothetical protein LOC100290206 0.049 PREDICTED: hypothetical protein XP_002347062 LOC100288573 0.049 PREDICTED: hypothetical protein XP_002343799 LOC100287139 0.049 PREDICTED: hypothetical protein XP_002342915 ANKRD33B 0.047 PREDICTED: ankyrin repeat domain 33B TAF4 0.047 TBP-associated factor 4 SCAF1 0.044 SR-related CTD-associated factor 1 ESPN 0.044 espin FLJ37078 0.044 hypothetical protein LOC222183 LOC100292845 0.042 PREDICTED: hypothetical protein LOC100289230 0.042 PREDICTED: hypothetical protein XP_002342600 BPTF 0.040 bromodomain PHD finger transcription factor isoform ... BPTF 0.040 bromodomain PHD finger transcription factor isoform ... LMTK3 0.040 lemur tyrosine kinase 3 LOC729370 0.040 PREDICTED: hypothetical protein LOC100129852 0.037 PREDICTED: hypothetical protein LOC100129852 0.037 PREDICTED: hypothetical protein LOC100129852 0.037 PREDICTED: hypothetical protein LOC100293268 0.035 PREDICTED: hypothetical protein USP51 0.035 ubiquitin specific protease 51 SAMD1 0.035 sterile alpha motif domain containing 1 WIPF2 0.035 WIRE protein SH3BP1 0.035 SH3-domain binding protein 1 KIAA0323 0.033 hypothetical protein LOC23351 FLJ34208 0.033 PREDICTED: hypothetical protein LOC401106 FLJ34208 0.033 PREDICTED: hypothetical protein LOC401106 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.