LOC100294335 16665

Name: LOC100294335	Sequence: fasta or formatted (1635aa)		NCBI GI: 239740955
Description: PREDICTED: similar to c114 SLIT-like testicular protein isoform 1		Referenced in: Testes and Sperm
Other entries for this name: alt prot [1700aa] PREDICTED: similar to c114 SLIT-like testicular protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 95 3 C cysteine 1.2 20 2 D aspartate 3.1 51 1 E glutamate 9.5 155 4 F phenylalanine 2.5 41 1 G glycine 4.0 65 2 H histidine 3.4 56 2 I isoleucine 4.0 65 2 K lysine 5.1 83 2 L leucine 9.8 161 3 M methionine 1.4 23 2 N asparagine 3.9 63 3 P proline 10.8 177 3 Q glutamine 6.9 112 3 R arginine 2.9 48 2 S serine 9.1 148 3 T threonine 8.7 143 2 V valine 5.4 89 3 W tryptophan 1.0 16 1 Y tyrosine 1.5 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to c114 SLIT-like testicular pro... LOC100294335 0.991 PREDICTED: similar to c114 SLIT-like testicular pro... LRRC37A2 0.981 c114 SLIT-like testicular protein LRRC37A 0.979 leucine rich repeat containing 37A LRRC37A3 0.976 leucine rich repeat containing 37, member A3 LOC100288229 0.521 PREDICTED: hypothetical protein XP_002343606 LRRC37B 0.223 leucine rich repeat containing 37B PRG4 0.025 proteoglycan 4 isoform D PRG4 0.025 proteoglycan 4 isoform C PRG4 0.025 proteoglycan 4 isoform B PRG4 0.025 proteoglycan 4 isoform A MLL2 0.021 myeloid/lymphoid or mixed-lineage leukemia 2 FAM186A 0.020 family with sequence similarity 186, member A [Homo... LOC100294420 0.019 PREDICTED: similar to mucin 2 MUC17 0.019 mucin 17 MUC6 0.019 mucin 6, gastric MUC2 0.018 mucin 2 precursor FSCB 0.018 fibrous sheath CABYR binding protein MDC1 0.017 mediator of DNA-damage checkpoint 1 TTN 0.017 titin isoform N2-A LOC284297 0.016 hypothetical protein LOC284297 FLJ22184 0.016 PREDICTED: hypothetical protein FLJ22184 YLPM1 0.016 YLP motif containing 1 DPCR1 0.015 diffuse panbronchiolitis critical region 1 protein ... KIAA0754 0.015 hypothetical protein LOC643314 MUC12 0.015 PREDICTED: mucin 12 RERE 0.015 atrophin-1 like protein isoform b RERE 0.015 atrophin-1 like protein isoform a RERE 0.015 atrophin-1 like protein isoform a ZAN 0.014 zonadhesin isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.