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Search of human proteins with 239508959
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239508959 PREDICTED: hypothetical protein [Homo sapiens]
(528 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo ... 1070 0.0
gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo ... 1070 0.0
gi|239508959 PREDICTED: hypothetical protein [Homo sapiens] 1070 0.0
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 54 5e-07
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 52 1e-06
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 52 2e-06
gi|197276602 microtubule-associated protein 4 isoform 5 [Homo sa... 52 2e-06
gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa... 52 2e-06
gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap... 52 2e-06
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap... 52 2e-06
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 51 3e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 50 4e-06
gi|20143482 melanoma antigen family E, 1 [Homo sapiens] 49 1e-05
gi|23510413 sorting nexin 26 [Homo sapiens] 48 2e-05
gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo sapi... 48 3e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 47 4e-05
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 47 6e-05
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] 47 6e-05
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 47 6e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 46 7e-05
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens] 46 7e-05
gi|116734706 interferon regulatory factor 2 binding protein 2 is... 46 7e-05
gi|116734704 interferon regulatory factor 2 binding protein 2 is... 46 7e-05
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 46 1e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 45 1e-04
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 45 2e-04
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 45 2e-04
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 45 2e-04
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 45 2e-04
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 44 3e-04
>gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo
sapiens]
Length = 528
Score = 1070 bits (2766), Expect = 0.0
Identities = 528/528 (100%), Positives = 528/528 (100%)
Query: 1 MSSAGVSSSSFNKGDFAAPVELLPPVEPHVVTEDVEGELGASTLWAVAFYPRGLEELWVA 60
MSSAGVSSSSFNKGDFAAPVELLPPVEPHVVTEDVEGELGASTLWAVAFYPRGLEELWVA
Sbjct: 1 MSSAGVSSSSFNKGDFAAPVELLPPVEPHVVTEDVEGELGASTLWAVAFYPRGLEELWVA 60
Query: 61 KLVAGREGEAQPVLVPIAVKQAQHRAAPGFMCLQEHQSLPGLPEPPPGSEVPRAAASWQE 120
KLVAGREGEAQPVLVPIAVKQAQHRAAPGFMCLQEHQSLPGLPEPPPGSEVPRAAASWQE
Sbjct: 61 KLVAGREGEAQPVLVPIAVKQAQHRAAPGFMCLQEHQSLPGLPEPPPGSEVPRAAASWQE 120
Query: 121 REGPCGTGKGEVTERWSQGQEEGQRQLETAVQLRKALVGDRGVIPQACSQSWLSLPPELA 180
REGPCGTGKGEVTERWSQGQEEGQRQLETAVQLRKALVGDRGVIPQACSQSWLSLPPELA
Sbjct: 121 REGPCGTGKGEVTERWSQGQEEGQRQLETAVQLRKALVGDRGVIPQACSQSWLSLPPELA 180
Query: 181 DFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGE 240
DFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGE
Sbjct: 181 DFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGE 240
Query: 241 PPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRAR 300
PPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRAR
Sbjct: 241 PPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRAR 300
Query: 301 GGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGG 360
GGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGG
Sbjct: 301 GGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGG 360
Query: 361 ARRLRAGTGVSSQIPYTASLTPTPSPPRASPPPFSPLYLGGHLRTVFLQGTADETHQSLA 420
ARRLRAGTGVSSQIPYTASLTPTPSPPRASPPPFSPLYLGGHLRTVFLQGTADETHQSLA
Sbjct: 361 ARRLRAGTGVSSQIPYTASLTPTPSPPRASPPPFSPLYLGGHLRTVFLQGTADETHQSLA 420
Query: 421 AAFRHRHLGAESGAVSSTNAVAALSLAWCWAQTEITYPTLHLGLVTPRGSSLQALHKGSG 480
AAFRHRHLGAESGAVSSTNAVAALSLAWCWAQTEITYPTLHLGLVTPRGSSLQALHKGSG
Sbjct: 421 AAFRHRHLGAESGAVSSTNAVAALSLAWCWAQTEITYPTLHLGLVTPRGSSLQALHKGSG 480
Query: 481 SHQGPGYLGEGKEEVSQPREQAIEYEGVLGIQAAVGVGEELGQRVLGY 528
SHQGPGYLGEGKEEVSQPREQAIEYEGVLGIQAAVGVGEELGQRVLGY
Sbjct: 481 SHQGPGYLGEGKEEVSQPREQAIEYEGVLGIQAAVGVGEELGQRVLGY 528
>gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo
sapiens]
Length = 528
Score = 1070 bits (2766), Expect = 0.0
Identities = 528/528 (100%), Positives = 528/528 (100%)
Query: 1 MSSAGVSSSSFNKGDFAAPVELLPPVEPHVVTEDVEGELGASTLWAVAFYPRGLEELWVA 60
MSSAGVSSSSFNKGDFAAPVELLPPVEPHVVTEDVEGELGASTLWAVAFYPRGLEELWVA
Sbjct: 1 MSSAGVSSSSFNKGDFAAPVELLPPVEPHVVTEDVEGELGASTLWAVAFYPRGLEELWVA 60
Query: 61 KLVAGREGEAQPVLVPIAVKQAQHRAAPGFMCLQEHQSLPGLPEPPPGSEVPRAAASWQE 120
KLVAGREGEAQPVLVPIAVKQAQHRAAPGFMCLQEHQSLPGLPEPPPGSEVPRAAASWQE
Sbjct: 61 KLVAGREGEAQPVLVPIAVKQAQHRAAPGFMCLQEHQSLPGLPEPPPGSEVPRAAASWQE 120
Query: 121 REGPCGTGKGEVTERWSQGQEEGQRQLETAVQLRKALVGDRGVIPQACSQSWLSLPPELA 180
REGPCGTGKGEVTERWSQGQEEGQRQLETAVQLRKALVGDRGVIPQACSQSWLSLPPELA
Sbjct: 121 REGPCGTGKGEVTERWSQGQEEGQRQLETAVQLRKALVGDRGVIPQACSQSWLSLPPELA 180
Query: 181 DFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGE 240
DFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGE
Sbjct: 181 DFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGE 240
Query: 241 PPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRAR 300
PPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRAR
Sbjct: 241 PPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRAR 300
Query: 301 GGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGG 360
GGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGG
Sbjct: 301 GGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGG 360
Query: 361 ARRLRAGTGVSSQIPYTASLTPTPSPPRASPPPFSPLYLGGHLRTVFLQGTADETHQSLA 420
ARRLRAGTGVSSQIPYTASLTPTPSPPRASPPPFSPLYLGGHLRTVFLQGTADETHQSLA
Sbjct: 361 ARRLRAGTGVSSQIPYTASLTPTPSPPRASPPPFSPLYLGGHLRTVFLQGTADETHQSLA 420
Query: 421 AAFRHRHLGAESGAVSSTNAVAALSLAWCWAQTEITYPTLHLGLVTPRGSSLQALHKGSG 480
AAFRHRHLGAESGAVSSTNAVAALSLAWCWAQTEITYPTLHLGLVTPRGSSLQALHKGSG
Sbjct: 421 AAFRHRHLGAESGAVSSTNAVAALSLAWCWAQTEITYPTLHLGLVTPRGSSLQALHKGSG 480
Query: 481 SHQGPGYLGEGKEEVSQPREQAIEYEGVLGIQAAVGVGEELGQRVLGY 528
SHQGPGYLGEGKEEVSQPREQAIEYEGVLGIQAAVGVGEELGQRVLGY
Sbjct: 481 SHQGPGYLGEGKEEVSQPREQAIEYEGVLGIQAAVGVGEELGQRVLGY 528
>gi|239508959 PREDICTED: hypothetical protein [Homo sapiens]
Length = 528
Score = 1070 bits (2766), Expect = 0.0
Identities = 528/528 (100%), Positives = 528/528 (100%)
Query: 1 MSSAGVSSSSFNKGDFAAPVELLPPVEPHVVTEDVEGELGASTLWAVAFYPRGLEELWVA 60
MSSAGVSSSSFNKGDFAAPVELLPPVEPHVVTEDVEGELGASTLWAVAFYPRGLEELWVA
Sbjct: 1 MSSAGVSSSSFNKGDFAAPVELLPPVEPHVVTEDVEGELGASTLWAVAFYPRGLEELWVA 60
Query: 61 KLVAGREGEAQPVLVPIAVKQAQHRAAPGFMCLQEHQSLPGLPEPPPGSEVPRAAASWQE 120
KLVAGREGEAQPVLVPIAVKQAQHRAAPGFMCLQEHQSLPGLPEPPPGSEVPRAAASWQE
Sbjct: 61 KLVAGREGEAQPVLVPIAVKQAQHRAAPGFMCLQEHQSLPGLPEPPPGSEVPRAAASWQE 120
Query: 121 REGPCGTGKGEVTERWSQGQEEGQRQLETAVQLRKALVGDRGVIPQACSQSWLSLPPELA 180
REGPCGTGKGEVTERWSQGQEEGQRQLETAVQLRKALVGDRGVIPQACSQSWLSLPPELA
Sbjct: 121 REGPCGTGKGEVTERWSQGQEEGQRQLETAVQLRKALVGDRGVIPQACSQSWLSLPPELA 180
Query: 181 DFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGE 240
DFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGE
Sbjct: 181 DFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGE 240
Query: 241 PPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRAR 300
PPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRAR
Sbjct: 241 PPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRAR 300
Query: 301 GGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGG 360
GGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGG
Sbjct: 301 GGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGG 360
Query: 361 ARRLRAGTGVSSQIPYTASLTPTPSPPRASPPPFSPLYLGGHLRTVFLQGTADETHQSLA 420
ARRLRAGTGVSSQIPYTASLTPTPSPPRASPPPFSPLYLGGHLRTVFLQGTADETHQSLA
Sbjct: 361 ARRLRAGTGVSSQIPYTASLTPTPSPPRASPPPFSPLYLGGHLRTVFLQGTADETHQSLA 420
Query: 421 AAFRHRHLGAESGAVSSTNAVAALSLAWCWAQTEITYPTLHLGLVTPRGSSLQALHKGSG 480
AAFRHRHLGAESGAVSSTNAVAALSLAWCWAQTEITYPTLHLGLVTPRGSSLQALHKGSG
Sbjct: 421 AAFRHRHLGAESGAVSSTNAVAALSLAWCWAQTEITYPTLHLGLVTPRGSSLQALHKGSG 480
Query: 481 SHQGPGYLGEGKEEVSQPREQAIEYEGVLGIQAAVGVGEELGQRVLGY 528
SHQGPGYLGEGKEEVSQPREQAIEYEGVLGIQAAVGVGEELGQRVLGY
Sbjct: 481 SHQGPGYLGEGKEEVSQPREQAIEYEGVLGIQAAVGVGEELGQRVLGY 528
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 53.5 bits (127), Expect = 5e-07
Identities = 52/187 (27%), Positives = 73/187 (39%), Gaps = 32/187 (17%)
Query: 241 PPTTGGKLTGPARLRSSRAPPPARRPLPCESLR-----TPSGTAGPRSPASGPDARGAPT 295
PP PA+ +PPP P C R TPS A + +GP+ PT
Sbjct: 438 PPPLPSPPPPPAQEEQEESPPPVV-PATCSRKRGRPPLTPSQRAEREAARAGPEGTSPPT 496
Query: 296 PGRARGGGASWSATPTTIPGPGPPRPQLLVIPRTSRC-----RLVPAAVVGRSSSVT--- 347
P TP+T G GPP V P+++ + + V RSS V
Sbjct: 497 P------------TPSTATG-GPPEDSPTVAPKSTTFLKNIRQFIMPVVSARSSRVIKTP 543
Query: 348 ---IDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPPPFSPLYLGGHLR 404
+D P + + LR S +P + P PSPPRA PP +P+ L R
Sbjct: 544 RRFMDEDPPKPPKVEVSPVLRPPITTSPPVPQEPA--PVPSPPRAPTPPSTPVPLPEKRR 601
Query: 405 TVFLQGT 411
++ + T
Sbjct: 602 SILREPT 608
Score = 36.6 bits (83), Expect = 0.058
Identities = 48/206 (23%), Positives = 64/206 (31%), Gaps = 38/206 (18%)
Query: 126 GTGKGEVTERWSQGQEEGQRQLE--------TAVQLRKALVGDRGVIPQACSQSWLSLP- 176
G +G V E S E + + + LR AL RG P+ + + P
Sbjct: 102 GPSRGCVPEEESSDGESDEEEFQGFHSDEDVAPSSLRSALRSQRGRAPRGRGRKHKTTPL 161
Query: 177 --PELADFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLL 234
P LAD +PA R+ G G E + L
Sbjct: 162 PPPRLADVAPTPPKTPA-------------------------RKRGEEGTERMVQALTEL 196
Query: 235 TCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAP 294
A P + P+ R SR PP R PC + A P+
Sbjct: 197 LRRAQAPQAPRSRACEPSTPRRSRGRPPGRPAGPCRRKQQAVVVAEAAVTIPKPEPPPPV 256
Query: 295 TPGRARGGGASWSATPTTIPGPGPPR 320
P + + G SW PGPG PR
Sbjct: 257 VPVKHQTG--SWKCKEGPGPGPGTPR 280
Score = 36.2 bits (82), Expect = 0.076
Identities = 46/173 (26%), Positives = 64/173 (36%), Gaps = 20/173 (11%)
Query: 223 GPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPR 282
G E L + +L A E + L P R S APPPA R ++ P+ + R
Sbjct: 1816 GGEDPPLDTDVLVPGAPERHSPIQNLDPPLRPDSGSAPPPAPRSFSGARIKVPNYSPS-R 1874
Query: 283 SPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIPRTSR--CRLVPAAVV 340
P G P+P G +S + T+ P P P PR SR L P
Sbjct: 1875 RPLGGVSFGPLPSP----GSPSSLTHHIPTVGDPDFPAP-----PRRSRRPSPLAPRPPP 1925
Query: 341 GRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPPP 393
R +S + S R+ T V + + T+ P P + PPP
Sbjct: 1926 SRWASPPLKTSPQL--------RVPPPTSVVTALTPTSGELAPPGPAPSPPPP 1970
Score = 30.0 bits (66), Expect = 5.4
Identities = 66/271 (24%), Positives = 85/271 (31%), Gaps = 65/271 (23%)
Query: 165 PQACSQSWLSLPPELADFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGP 224
P A + S PP + C +R P PS+ A R +R GTS P
Sbjct: 447 PPAQEEQEESPPPVVPATCSRKRGRPPLTPSQR-----------AEREAARAGPEGTSPP 495
Query: 225 EASTLSSGLLTCSAGEP---PTTGGKLTGPAR-----------LRSSRAPPPARR----- 265
+ T + G P PT K T + RSSR RR
Sbjct: 496 TPTPS-----TATGGPPEDSPTVAPKSTTFLKNIRQFIMPVVSARSSRVIKTPRRFMDED 550
Query: 266 -PLPCES-----LRTPSGTAGP--RSPASGPDARGAPTPGRA------------RGGGAS 305
P P + LR P T+ P + PA P APTP R
Sbjct: 551 PPKPPKVEVSPVLRPPITTSPPVPQEPAPVPSPPRAPTPPSTPVPLPEKRRSILREPTFR 610
Query: 306 WSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGGARRLR 365
W++ +P P P P P PA R + P+ + L+
Sbjct: 611 WTSLTRELPPPPPAPPP----PPAPSPPPAPATSSRRPLLLRAPQFTPSEAH------LK 660
Query: 366 AGTGVSSQIPYTASLTPTPSPPRASPPPFSP 396
V + P A P P PP A P P
Sbjct: 661 IYESVLTPPPLGAPEAPEPEPPPADDSPAEP 691
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 52.0 bits (123), Expect = 1e-06
Identities = 90/368 (24%), Positives = 129/368 (35%), Gaps = 42/368 (11%)
Query: 48 AFYPRGLEELWVAKLVAGREGEAQPVLVPIAVKQAQHRAAPGFMCLQEHQSLPGLPEPPP 107
+F P G + K + E + +P L P A+K ++ + PG + + P PP
Sbjct: 876 SFLPPGPGLMLRQKSIGAAEDD-RPYLAPPAMKFSRSLSVPGSEDIPPPPTTS--PPEPP 932
Query: 108 GSEVPRAAASWQ----EREGPCGTGKGEVTERWSQGQEEGQRQLETAVQLRKALVGDRGV 163
S P ++S + R GP G G S +G +T V R+ + G
Sbjct: 933 YSTPPVPSSSGRLTPSPRGGPFNPGSGGPLPASSPASFDGPSPPDTRVGSREKSLYHSGP 992
Query: 164 IPQACSQS----WLSLPPELADFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRV 219
+P A PP P + P LA+ + R R
Sbjct: 993 LPPAHHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRG 1052
Query: 220 GTSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTA 279
G P S + G GG GPA LR + PP A R+ G
Sbjct: 1053 GGPSPTPGAPSPSHHGSAGGG----GGSSQGPA-LRYFQLPPRAASAAMYVPARSGRGRK 1107
Query: 280 GPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAV 339
GP + G P +GGG + +PT+ P PP + P +P +
Sbjct: 1108 GPLVKQT--KVEGEPQ----KGGGLPPAPSPTSPASPQPP--PAVAAPSEKNSIPIPTII 1159
Query: 340 V--------GRSSSVTIDHSRPASS---RGGGARRLRAGTGVSSQIPYTASLTPTPSPPR 388
+ GRSS + + P + GGG G G SS P A ++P P P
Sbjct: 1160 IKAPSTSSSGRSSQGSSTEAEPPTQPEPTGGG------GGGGSSPSPAPA-MSPVPPSPS 1212
Query: 389 ASPPPFSP 396
P P SP
Sbjct: 1213 PVPTPASP 1220
Score = 39.3 bits (90), Expect = 0.009
Identities = 74/294 (25%), Positives = 103/294 (35%), Gaps = 48/294 (16%)
Query: 94 QEHQSLPGLPEPP--PGSEVPRAAASWQEREGPCGTGKGEVTERWSQGQEEGQRQLETAV 151
Q + PG P PP P P AA + P GT G + E S+ + + ++
Sbjct: 1636 QGASAAPGDPHPPGPPAPAAPAPAAPQPGPDPPPGTDSG-IEEVDSRSSSDHPLETISSA 1694
Query: 152 QLRKALVGDRGVIPQACSQSWLSLP--PELADFCLC----QRVSPASCPSRSCPSAAVFI 205
+L + G + + PEL D + Q +S P P +
Sbjct: 1695 STLSSLSAEGGGSAGGGGGAGAGVASGPELLDTYVAYLDGQAFGGSSTPGPPYPPQLM-- 1752
Query: 206 LAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGEPPT---TGGKLTGPARLRSSRAPPP 262
S R R +G SG S GL PT TG G LR+ PP
Sbjct: 1753 ----TPSKLRGRALGASGGLRPGPSGGLRDPVTPTSPTVSVTGAGTDGLLALRACSGPPT 1808
Query: 263 ARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGASWSATPTTI----PGPGP 318
A G AG A P+ P P + S+ P + GPGP
Sbjct: 1809 A-------------GVAGG-PVAVEPEVPPVPLP--------TASSLPRKLLPWEEGPGP 1846
Query: 319 PRPQL---LVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGGARRLRAGTG 369
P P L L P+ S V A+++ SS + +S+ GG R G+G
Sbjct: 1847 PPPPLPGPLAQPQASALATVKASIISELSS-KLQQFGGSSAAGGALPWARGGSG 1899
Score = 33.1 bits (74), Expect = 0.64
Identities = 54/202 (26%), Positives = 72/202 (35%), Gaps = 45/202 (22%)
Query: 173 LSLPPELADFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSG 232
L++PP L + S S + P VF AA S G GP + S G
Sbjct: 428 LTVPPAL--------LRANSDTSMALPDWMVFSAPGAASS-------GAPGPTSG--SQG 470
Query: 233 LLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARG 292
SA + G L + R +RA P+R P ++ R P G P + G
Sbjct: 471 QSQPSAPTTKLSSGTLRSASSPRGARARSPSRGRHPEDAKRQPRGR---------PSSSG 521
Query: 293 APTPGRARGGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSR 352
P G A G G S GPG + R R + +AV GRS +
Sbjct: 522 TPREGPAGGTGGS--------GGPGGS------LGSRGRRRKLYSAVPGRSFMAVKSYQA 567
Query: 353 PAS-----SRGGGARRLRAGTG 369
A S+G + L G G
Sbjct: 568 QAEGEISLSKGEKIKVLSIGEG 589
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 51.6 bits (122), Expect = 2e-06
Identities = 64/262 (24%), Positives = 98/262 (37%), Gaps = 52/262 (19%)
Query: 161 RGVIPQACSQSWLSLPPELADFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVG 220
R + + S S L+ P +A +R+ P + +R+ P A++ A
Sbjct: 73 RASLTRMQSSSLLTRTPSMASL---KRMPPRASRTRTLPRASLMRRPSTASL-------- 121
Query: 221 TSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPA---RRPLPCESLRTPSG 277
T P ++L++ S P+T LT P+R +R PP A P RTP
Sbjct: 122 TRSPSRASLTTTPSRASLSMTPSTAAALTMPSRASLTRTPPRASLTMTPSTASLTRTP-- 179
Query: 278 TAGPRSPASGPDARGAPTP----------------GRARGGGASWSATPTTIPGPGPPRP 321
PR+ +G +R +PT R + P P PPR
Sbjct: 180 ---PRASPTGMPSRTSPTGMPSTASLTKMDSTASITRTLSRASPTGTPPRASPTGSPPRA 236
Query: 322 QLLVIPRTSRC-----RLVPAAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPY 376
L ++P T+ R P ++ R+S +D + + R T + P
Sbjct: 237 SLSMMPSTALLIRTPPRASPTGMLSRTSLTKMDSTASITRTPS-----RPSTASPTGTPS 291
Query: 377 TASLTPTPSP-------PRASP 391
ASL+ TPS PRASP
Sbjct: 292 RASLSMTPSTASLMRMLPRASP 313
Score = 47.8 bits (112), Expect = 3e-05
Identities = 60/225 (26%), Positives = 82/225 (36%), Gaps = 34/225 (15%)
Query: 187 RVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGEPPTTGG 246
R SP P R+ P+ SR GT + T S T S P+T
Sbjct: 436 RASPTGTPPRASPTGTP----------SRASPTGTQSTASPTGSPS--TASPTGSPSTAS 483
Query: 247 KLTGPARLRSSRAPPPA---RRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGG 303
P+R +R P A + RTPS A P S G+P+ A G
Sbjct: 484 PTGSPSRASLTRTPSRASLTKMESTASITRTPS-RASPTWTPSTASPTGSPSTALAMGSP 542
Query: 304 ASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGGARR 363
+ + T T P R L P + A + R+ S + P S+ G
Sbjct: 543 SRAALTRT------PSRASLTRTPSRASLTTPSRASLTRTPSTVLLTRMPPSASPTGMPS 596
Query: 364 LRAGTGVSS-----QIPYTASLT-------PTPSPPRASPPPFSP 396
+ TG+ S ++ TAS+T PT +PPRASP P
Sbjct: 597 RTSPTGMPSSALLTKMDSTASITRTPPRASPTETPPRASPTGTPP 641
Score = 44.3 bits (103), Expect = 3e-04
Identities = 69/234 (29%), Positives = 89/234 (38%), Gaps = 49/234 (20%)
Query: 187 RVSPASCPSRSCPSAAVFILAVA--------ARSCSRRRRVGTSGPEASTLSSGLLTCSA 238
R SP PSR+ P+ ++ R+ SR GT P AS
Sbjct: 181 RASPTGMPSRTSPTGMPSTASLTKMDSTASITRTLSRASPTGTP-PRASP---------T 230
Query: 239 GEPPTTGGKLTGPARLRSSRAPPPARRP--LPCESLRTPSGTAG-PRSPASGPDARGAPT 295
G PP + P+ R PP A L SL TA R+P+ A T
Sbjct: 231 GSPPRASLSMM-PSTALLIRTPPRASPTGMLSRTSLTKMDSTASITRTPSRPSTASPTGT 289
Query: 296 PGRARGGGASWSATPTT------IPGPGPP----RPQLLVIPRT-SRCRLVPAAVVGRSS 344
P RA S S TP+T +P P R L + T S R P A + R+
Sbjct: 290 PSRA-----SLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDSTASISRTPPRASITRTP 344
Query: 345 SVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLT-------PTPSPPRASP 391
S +P+++ G + TG P TASLT PT +PPRASP
Sbjct: 345 SRASPTGKPSTASPTGTPSRASPTGS----PSTASLTGLSSTASPTGTPPRASP 394
Score = 40.4 bits (93), Expect = 0.004
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 40/229 (17%)
Query: 189 SPASCPSRSCPSAAVFILAVAARSCSRR------RRVGTSGPEASTLS--------SGLL 234
SP PSR+ P+ + ++ S + R T P ++L+ +G+L
Sbjct: 357 SPTGTPSRASPTGSPSTASLTGLSSTASPTGTPPRASPTGTPSTASLTRKPPRASPTGML 416
Query: 235 T-CSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGA 293
+ S + +T P R + PP A P S +P+GT SP P + +
Sbjct: 417 SRTSITKMDSTASPTRTPPRASPTGTPPRAS-PTGTPSRASPTGTQSTASPTGSP-STAS 474
Query: 294 PTPGRARGGGASWSATPTTIPGPGPPRPQLLVIP-RTSRCRLVPAAVVGRSSSVTIDHSR 352
PT G+ +A+PT P R L P R S ++ A + R+ S
Sbjct: 475 PT-------GSPSTASPT----GSPSRASLTRTPSRASLTKMESTASITRTPSRASPTWT 523
Query: 353 P--ASSRGGGARRLRAGT---GVSSQIPYTASLTPTPS------PPRAS 390
P AS G + L G+ ++ P ASLT TPS P RAS
Sbjct: 524 PSTASPTGSPSTALAMGSPSRAALTRTPSRASLTRTPSRASLTTPSRAS 572
Score = 40.0 bits (92), Expect = 0.005
Identities = 68/244 (27%), Positives = 91/244 (37%), Gaps = 51/244 (20%)
Query: 257 SRAPPPA---RRPLPCESLRTPSGTAGPRSPASGPDARGAPT--PGRARGGGASWSATPT 311
SR PP A R P S +P+G SP P +R +PT P A G S +A+PT
Sbjct: 332 SRTPPRASITRTP----SRASPTGKPSTASPTGTP-SRASPTGSPSTASLTGLSSTASPT 386
Query: 312 TIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVS 371
P PR A+ G S+ ++ P +S G R +
Sbjct: 387 GTP------------PR--------ASPTGTPSTASLTRKPPRASPTGMLSR-------T 419
Query: 372 SQIPYTASLTPTPSPPRAS----PPPFSPLYLGGHLRTVFLQGTADET-HQSLAAAFRHR 426
S ++ +PT +PPRAS PP SP Q TA T S A+
Sbjct: 420 SITKMDSTASPTRTPPRASPTGTPPRASPTGTPSRASPTGTQSTASPTGSPSTASPTGSP 479
Query: 427 HLGAESGA---VSSTNAVAALSLAWCWAQTEIT------YPTLHLGLVTPRGSSLQALHK 477
+ +G+ S T + SL + IT PT +P GS AL
Sbjct: 480 STASPTGSPSRASLTRTPSRASLTKMESTASITRTPSRASPTWTPSTASPTGSPSTALAM 539
Query: 478 GSGS 481
GS S
Sbjct: 540 GSPS 543
Score = 38.9 bits (89), Expect = 0.012
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 22/234 (9%)
Query: 176 PPELADFCLCQRVSPASCPSRSCPSAAVFILA------VAARSCSRRRRVGTSGPEASTL 229
PP + R SP PSR+ P+ + A+ + S T P ++L
Sbjct: 434 PPRASPTGTPPRASPTGTPSRASPTGTQSTASPTGSPSTASPTGSPSTASPTGSPSRASL 493
Query: 230 SSGLLTCSAGEPPTTGGKLTGPARLRSSRAPP---PARRPLPCESLRTPSGTAGPRSPAS 286
+ S + +T P+R + P P P ++ +PS A R+P+
Sbjct: 494 TRTPSRASLTKMESTASITRTPSRASPTWTPSTASPTGSPSTALAMGSPSRAALTRTPSR 553
Query: 287 GPDARGAPTPGRAR---GGGASWSATPTTIPGPG-PPRPQLLVIP-RTSRCRLVPAAVVG 341
R TP RA AS + TP+T+ PP +P RTS + +A++
Sbjct: 554 ASLTR---TPSRASLTTPSRASLTRTPSTVLLTRMPPSASPTGMPSRTSPTGMPSSALLT 610
Query: 342 R-SSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTAS---LTPTPSPPRASP 391
+ S+ +I + P +S R + TG + T + +PT +PPRASP
Sbjct: 611 KMDSTASITRTPPRASPTETPPRA-SPTGTPPRASPTGTPPRASPTGTPPRASP 663
>gi|197276602 microtubule-associated protein 4 isoform 5 [Homo
sapiens]
Length = 817
Score = 51.6 bits (122), Expect = 2e-06
Identities = 51/193 (26%), Positives = 75/193 (38%), Gaps = 10/193 (5%)
Query: 209 AARSCSRRRRVGTSGPE--ASTLSSGL----LTCSAGEPPTTGGKLTGPARLRSSRAPPP 262
A S S+ + TS P+ A T GL ++ ++G P K A R S P
Sbjct: 445 AKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPKRPAVASARPSILPSK 504
Query: 263 ARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQ 322
+P P + P A P PAS P +R + + +A +T P P
Sbjct: 505 DVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTL 564
Query: 323 LLVIPRTSRCRLVPAAVVGRSS-SVTIDHSRPASSRGGGARRLRAGTG---VSSQIPYTA 378
L P + PA V ++ SV D SRP S+ ++ +G + +P
Sbjct: 565 LPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRV 624
Query: 379 SLTPTPSPPRASP 391
TP PS P +P
Sbjct: 625 KATPMPSRPSTTP 637
>gi|197276600 microtubule-associated protein 4 isoform 4 [Homo
sapiens]
Length = 1135
Score = 51.6 bits (122), Expect = 2e-06
Identities = 51/193 (26%), Positives = 75/193 (38%), Gaps = 10/193 (5%)
Query: 209 AARSCSRRRRVGTSGPE--ASTLSSGL----LTCSAGEPPTTGGKLTGPARLRSSRAPPP 262
A S S+ + TS P+ A T GL ++ ++G P K A R S P
Sbjct: 710 AKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPKRPAVASARPSILPSK 769
Query: 263 ARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQ 322
+P P + P A P PAS P +R + + +A +T P P
Sbjct: 770 DVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTL 829
Query: 323 LLVIPRTSRCRLVPAAVVGRSS-SVTIDHSRPASSRGGGARRLRAGTG---VSSQIPYTA 378
L P + PA V ++ SV D SRP S+ ++ +G + +P
Sbjct: 830 LPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRV 889
Query: 379 SLTPTPSPPRASP 391
TP PS P +P
Sbjct: 890 KATPMPSRPSTTP 902
>gi|47519675 microtubule-associated protein 4 isoform 2 [Homo
sapiens]
Length = 887
Score = 51.6 bits (122), Expect = 2e-06
Identities = 51/193 (26%), Positives = 75/193 (38%), Gaps = 10/193 (5%)
Query: 209 AARSCSRRRRVGTSGPE--ASTLSSGL----LTCSAGEPPTTGGKLTGPARLRSSRAPPP 262
A S S+ + TS P+ A T GL ++ ++G P K A R S P
Sbjct: 445 AKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPKRPAVASARPSILPSK 504
Query: 263 ARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQ 322
+P P + P A P PAS P +R + + +A +T P P
Sbjct: 505 DVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTL 564
Query: 323 LLVIPRTSRCRLVPAAVVGRSS-SVTIDHSRPASSRGGGARRLRAGTG---VSSQIPYTA 378
L P + PA V ++ SV D SRP S+ ++ +G + +P
Sbjct: 565 LPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRV 624
Query: 379 SLTPTPSPPRASP 391
TP PS P +P
Sbjct: 625 KATPMPSRPSTTP 637
>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo
sapiens]
Length = 1152
Score = 51.6 bits (122), Expect = 2e-06
Identities = 51/193 (26%), Positives = 75/193 (38%), Gaps = 10/193 (5%)
Query: 209 AARSCSRRRRVGTSGPE--ASTLSSGL----LTCSAGEPPTTGGKLTGPARLRSSRAPPP 262
A S S+ + TS P+ A T GL ++ ++G P K A R S P
Sbjct: 710 AKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPKRPAVASARPSILPSK 769
Query: 263 ARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQ 322
+P P + P A P PAS P +R + + +A +T P P
Sbjct: 770 DVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTL 829
Query: 323 LLVIPRTSRCRLVPAAVVGRSS-SVTIDHSRPASSRGGGARRLRAGTG---VSSQIPYTA 378
L P + PA V ++ SV D SRP S+ ++ +G + +P
Sbjct: 830 LPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRV 889
Query: 379 SLTPTPSPPRASP 391
TP PS P +P
Sbjct: 890 KATPMPSRPSTTP 902
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 50.8 bits (120), Expect = 3e-06
Identities = 61/213 (28%), Positives = 81/213 (38%), Gaps = 44/213 (20%)
Query: 217 RRVGTSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAP-PPARRPLPCESLRTP 275
R T P+ S LS+G ++G P T PA R SRA P P S R
Sbjct: 144 RGKATEAPKRSALSAGARRDTSGPTPGT----PSPAMARRSRAAGTEVGLPRPAPSARPR 199
Query: 276 SGTAGPRSPASG----------PDARGAPTPG----RARGGGASWSATPTTIPG------ 315
T GPR S P AR P+ G R S SATP + P
Sbjct: 200 PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSA 259
Query: 316 ---------PGPPRP---QLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGGARR 363
P P+P Q L P+ + R A +G SS + P+ ++ AR
Sbjct: 260 RGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTK---ARP 316
Query: 364 LRAGTGVSSQIPYTASLTPTPSPPRASPPPFSP 396
+ ++ +P T PSPP A+P P +P
Sbjct: 317 VPPPDNAATPLPATLP----PSPPLATPLPLAP 345
Score = 43.1 bits (100), Expect = 6e-04
Identities = 52/181 (28%), Positives = 72/181 (39%), Gaps = 12/181 (6%)
Query: 220 GTSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTA 279
G P A S G ++ TT G LR S A R E+ + + +A
Sbjct: 100 GERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRIS-AEETVARGKATEAPKRSALSA 158
Query: 280 GPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPP-RPQLLVIPRTSRCRLVPAA 338
G R SGP G P+P AR A+ T +P P P RP+ P T R ++
Sbjct: 159 GARRDTSGPTP-GTPSPAMARRSRAA--GTEVGLPRPAPSARPR----PPTEGPRKSVSS 211
Query: 339 VVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPS---PPRASPPPFS 395
S++ +R S GGG +R + + SS P ++ PS PRA P
Sbjct: 212 ASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQ 271
Query: 396 P 396
P
Sbjct: 272 P 272
Score = 38.5 bits (88), Expect = 0.015
Identities = 63/236 (26%), Positives = 86/236 (36%), Gaps = 42/236 (17%)
Query: 184 LCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTL-------SSGLLTC 236
L +P S P+RS PSA A A S + + + P T + G L+
Sbjct: 242 LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSS 301
Query: 237 SAGEPPTTGGKLTGPARLRSSRAPP-PARRPLPCESLRTPSGTAGPRSPASGPDARGAPT 295
S P+ G P + A P PA P P L TP A P SP++ P + P+
Sbjct: 302 SPLATPSPSGTKARPVPPPDNAATPLPATLP-PSPPLATPLPLAPP-SPSAPPSLQTLPS 359
Query: 296 PGRARGGGASWSATPTTIPGPGPPR---------PQLLVIPRTSRCRLVPAAVVGRS--- 343
P P T P PP P L IP VP ++ S
Sbjct: 360 P-------------PATPPSQAPPSMTTPPMQAPPSLQTIPPIQ----VPHSLTSPSLQA 402
Query: 344 --SSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPPPFSPL 397
S + + + +S G + S ASLT +PS P ++PP PL
Sbjct: 403 PPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLT-SPSRPASTPPDSPPL 457
Score = 37.7 bits (86), Expect = 0.026
Identities = 50/185 (27%), Positives = 73/185 (39%), Gaps = 21/185 (11%)
Query: 242 PTTGGKLTGPARLRSSRAPPPARRPL--PCESLRTPSGTAGPRSPA--SGPDARGAPTPG 297
P T P++ S A PP + P P +PS T P++P + P + P+P
Sbjct: 683 PPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPP 742
Query: 298 RARGGGASWSATPTTIPGPGPPR-PQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASS 356
AS +P+ P PPR P LL P PA++ + + PA +
Sbjct: 743 ------ASPPMSPSATP---PPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALA 793
Query: 357 RGGGARRLRAGTGVSSQIPYTASLTPT---PSPPRASPPPFSPLYLGGHLRTVFLQGTAD 413
L+A + P A +P+ P P A+PPP +P L L V A
Sbjct: 794 ----TPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPAS 849
Query: 414 ETHQS 418
T Q+
Sbjct: 850 PTLQA 854
Score = 36.6 bits (83), Expect = 0.058
Identities = 65/269 (24%), Positives = 92/269 (34%), Gaps = 21/269 (7%)
Query: 188 VSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTS-GPEASTLSSGLLTCSAGEPPTTGG 246
+SP + PS P+A L A S V P AS S T + PP+
Sbjct: 642 LSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAA 701
Query: 247 KL--------TGPARLRSSRAPPPARRPLPCESLRTPSG--TAGPRSPASGPDARGAP-- 294
P S+ PP A PL L+ P + P SP++ P R P
Sbjct: 702 PPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLL 761
Query: 295 -TPGRARGGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGR---SSSVTIDH 350
P S + + P P P L P PA+ G+ S S ++
Sbjct: 762 AAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPM 821
Query: 351 SRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPPPFSPLYLGGHLRTVFL-Q 409
S A+ L A Q+P + +PT PR P P + G T+ L
Sbjct: 822 SPLATPPPQAPPVLAAPL---LQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAP 878
Query: 410 GTADETHQSLAAAFRHRHLGAESGAVSST 438
G +S ++ L S + +ST
Sbjct: 879 GPPPPPSRSPSSTLSGPDLAGHSSSATST 907
Score = 35.4 bits (80), Expect = 0.13
Identities = 41/159 (25%), Positives = 53/159 (33%), Gaps = 22/159 (13%)
Query: 190 PASCPSRSCPSAAVFILAVAARSCSRRRRVG--TSGPEASTLSSGL--LTCSAGEPPTTG 245
P P +S SA+ + + RR G P + +LSS L+ A P+
Sbjct: 201 PTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSAR 260
Query: 246 GKLTGPAR-----------LRSSRAPPP------ARRPLPCESLRTPSGTAGPRSPASGP 288
G PA LR + PP A PL L TPS + P P
Sbjct: 261 GTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPP 320
Query: 289 DARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIP 327
D P P + P P P P P L +P
Sbjct: 321 DNAATPLPATLPPSPPLATPLPLAPPSPSAP-PSLQTLP 358
Score = 34.7 bits (78), Expect = 0.22
Identities = 58/209 (27%), Positives = 71/209 (33%), Gaps = 22/209 (10%)
Query: 191 ASCPSRSCPSAAVFILAV-----AARSCSRRRRVGTSGPEASTLSSGLLTCSAGEPPTTG 245
A+ P ++ P A +L V A+ + RR T GP+ S L A PP
Sbjct: 825 ATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPP- 883
Query: 246 GKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRS-PASGPDARGAPTPGRARGGGA 304
P+R SS P + TP G S P G A P A A
Sbjct: 884 -----PSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPA 938
Query: 305 SWS---ATPTTIPG-PGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVT-----IDHSRPAS 355
+WS A P G PG P P S L S T +D P+
Sbjct: 939 AWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPG-PSP 997
Query: 356 SRGGGARRLRAGTGVSSQIPYTASLTPTP 384
GG AG G SS+ P A L P
Sbjct: 998 GTSGGKAAAGAGAGASSRSPKQARLGELP 1026
Score = 31.2 bits (69), Expect = 2.4
Identities = 38/137 (27%), Positives = 51/137 (37%), Gaps = 7/137 (5%)
Query: 260 PPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGAS-WSATPTTIPGP-G 317
P A R P S T S R PASG R P + G +S A+ TT PGP G
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLG 130
Query: 318 PPRPQLLVIPRTSRCRLVPA---AVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQI 374
++ +R + A + + + P + ARR RA G +
Sbjct: 131 QKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRA-AGTEVGL 189
Query: 375 PYTASLTPTPSPPRASP 391
P A + P PP P
Sbjct: 190 PRPAP-SARPRPPTEGP 205
Score = 31.2 bits (69), Expect = 2.4
Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 221 TSGPEASTLSSGLLTCSAGEPPTTGGK-LTGPARLRSSRAPPPAR-RPLPCESLRTP--- 275
T GPE++T + G L P T+GGK G SSR+P AR LP +L+
Sbjct: 978 TEGPESATPAPGALD-PGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQ 1036
Query: 276 --SGTAGPRSPASGPDARGAPTPGRARGGGASWSA 308
+ A G PG A GGG + A
Sbjct: 1037 HLLSRTLLLAAAEGAAGGSGGGPGGAEGGGVTGGA 1071
Score = 30.0 bits (66), Expect = 5.4
Identities = 59/247 (23%), Positives = 89/247 (36%), Gaps = 37/247 (14%)
Query: 163 VIPQACSQSWLSLPPELADFCLCQRVSPASC---PSRSCPSAAVFILAVAARSCSRRRRV 219
++P +QS L+ PP L + PAS P + PS A L A+ +
Sbjct: 508 IMPPLETQSSLA-PPSL-------QTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLE 559
Query: 220 GTSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTA 279
P L + + P T T P + + A PP + LP L +P T
Sbjct: 560 TPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQG-LPSPPL-SPLATP 617
Query: 280 GPRSPA--SGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRP---QLLVIPRTS---- 330
P++P + P + P+P AS +P P P P LL P +
Sbjct: 618 PPQAPPXLALPPLQAPPSPP------ASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP 671
Query: 331 --RCRLVPAAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPR 388
+ P A S S T P S + V P + ++P+ +PP
Sbjct: 672 PVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQ-------VPPSPPASPPMSPSATPPP 724
Query: 389 ASPPPFS 395
+PPP +
Sbjct: 725 QAPPPLA 731
Score = 30.0 bits (66), Expect = 5.4
Identities = 38/146 (26%), Positives = 50/146 (34%), Gaps = 23/146 (15%)
Query: 190 PASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGEPPTTGGKLT 249
P+ PS + + + +A S R SGPE +A PP
Sbjct: 884 PSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGA--------AASPPPDAELAAC 935
Query: 250 GPARLRSSRAPPPARR-----PLP---------CESLRTPSGTAGPRSPASGPDARG-AP 294
PA APP A R PLP + L T T GP S P A P
Sbjct: 936 HPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGP 995
Query: 295 TPGRARGGGASWSATPTTIPGPGPPR 320
+PG + G A+ + + P R
Sbjct: 996 SPGTSGGKAAAGAGAGASSRSPKQAR 1021
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 50.4 bits (119), Expect = 4e-06
Identities = 67/240 (27%), Positives = 87/240 (36%), Gaps = 51/240 (21%)
Query: 190 PASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGEPPTTGGKLT 249
PA+ P S A L A + G A+ G T A PP+ G
Sbjct: 1036 PAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPA 1095
Query: 250 GPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDA----------RGAPT---- 295
P+ + + PP A P P L TP P +PA+ P + +GAPT
Sbjct: 1096 TPSP-KGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAA 1154
Query: 296 -PGRARGGGASW--SATPTTIPGPGPPRPQL-LVIPRTSRCRLVPAAVVGRSSSVTIDHS 351
P +GG A+ PTT P PP P+ L P PAA
Sbjct: 1155 TPPSPKGGLATPPPKGAPTT-PAATPPSPKGGLATPSPKGAPTTPAAT------------ 1201
Query: 352 RPASSRGG-------GARRLRAGT------GVSSQIPYTASLTPTPSPPR-----ASPPP 393
P S +GG GA A T G+++ P A TP +PP A+PPP
Sbjct: 1202 -PPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPP 1260
Score = 48.1 bits (113), Expect = 2e-05
Identities = 54/189 (28%), Positives = 70/189 (37%), Gaps = 27/189 (14%)
Query: 223 GPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPR 282
G A+ G T A PP+ G L P+ + + P A P P L TPS P
Sbjct: 1161 GGLATPPPKGAPTTPAATPPSPKGGLATPSP-KGAPTTPAATPPSPKGGLATPSPKGAPT 1219
Query: 283 SPASGPDA----------RGAP-----TPGRARGGGASWSATPTTIPGPGPPRPQLLVIP 327
+PA+ P + +GAP TP +GG P T P G P P P
Sbjct: 1220 TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG-------PATPPPKGAPTPPAATPP 1272
Query: 328 RTSRCRLVPAAVVGRSSSVTIDHS---RPASSRGGGARRLRAGTGVSSQ-IPYTASLTPT 383
P + +V S PA+S GA A T S + P T
Sbjct: 1273 SLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGA 1332
Query: 384 PSPPRASPP 392
P+PP +PP
Sbjct: 1333 PTPPAVTPP 1341
Score = 46.2 bits (108), Expect = 7e-05
Identities = 47/176 (26%), Positives = 69/176 (39%), Gaps = 25/176 (14%)
Query: 223 GPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPR 282
G A++ G T A PP+ G S PPP P P ++ PS P
Sbjct: 1299 GGPATSPPKGAPTPPAATPPSPKG---------SPGTPPPKGAPTP-PAVTPPSPKGTPT 1348
Query: 283 SPASGPDARGAPTPGRARGGGASWSATPTTIPGPG--PPRPQLLVIPRTSRCRLVPAAVV 340
PA+ P ++G PT ++ G +ATP+ GP PP P+ R +P+
Sbjct: 1349 LPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPK--------RGPAIPSPKG 1400
Query: 341 GRSSSVTIDHS---RPAS--SRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASP 391
+S I S PA+ +R G A + + P + P S P+ P
Sbjct: 1401 DPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGP 1456
Score = 45.1 bits (105), Expect = 2e-04
Identities = 46/155 (29%), Positives = 61/155 (39%), Gaps = 20/155 (12%)
Query: 255 RSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDA-RGAPTPGRARGGGASWSATPTT- 312
+ + PP A P P TPS P PA+ P + +G P +G +ATP +
Sbjct: 937 KGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSP 996
Query: 313 -----IPGP-GPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGG------- 359
P P G P P + P PAA + T + P S +G
Sbjct: 997 KGGPATPSPKGAPTPPAVTPPSPKGS---PAATPFPKGASTPPAATPPSPKGSPAATPLP 1053
Query: 360 -GARRLRAGTGVSSQ-IPYTASLTPTPSPPRASPP 392
GA A T S + P T SL P+PP A+PP
Sbjct: 1054 KGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPP 1088
Score = 44.7 bits (104), Expect = 2e-04
Identities = 65/241 (26%), Positives = 82/241 (34%), Gaps = 57/241 (23%)
Query: 189 SPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGEPPTTGGKL 248
SP P+ P A AV S P A+ G T A PP+ G
Sbjct: 995 SPKGGPATPSPKGAPTPPAVTPPSPK-------GSPAATPFPKGASTPPAATPPSPKGSP 1047
Query: 249 TGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDA----------RGAP---- 294
+ + P A P P TPS P PA+ P + +GAP
Sbjct: 1048 AATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPA 1107
Query: 295 -TPGRARGGGAS--WSATPTTIPGPGPPRPQ-LLVIPRTSRCRLVPAAVVGRSSSVTIDH 350
TP +GG A+ PTT P PP P+ L P PAA
Sbjct: 1108 ATPPSPKGGLATPPHKGAPTT-PAATPPSPKGGLATPPPKGAPTTPAAT----------- 1155
Query: 351 SRPASSRGG-------GARRLRAGT------GVSSQIPYTASLTPTPSPPR-----ASPP 392
P S +GG GA A T G+++ P A TP +PP A+P
Sbjct: 1156 --PPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPS 1213
Query: 393 P 393
P
Sbjct: 1214 P 1214
Score = 44.3 bits (103), Expect = 3e-04
Identities = 56/236 (23%), Positives = 82/236 (34%), Gaps = 27/236 (11%)
Query: 173 LSLPPELADFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGT--SGPEASTLS 230
L L PE+ + PA P + + + A S + T SG A+ S
Sbjct: 724 LVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASS 783
Query: 231 SGLLTCSAGEPPTTGGKLTG----PARLRSSRAPPPARRPL-----PCESLRTPSGTAGP 281
G LT A P G ++ P + S P L P E+ P +
Sbjct: 784 KGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSF 843
Query: 282 RSPASGPDARGAPTPGRARGGGASWSATP-----TTIPGPGPPRPQLLVIPRTSRCRLVP 336
+ P +PTP +G + TP T+P P P ++ +P P
Sbjct: 844 QGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATP 903
Query: 337 AAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPP 392
A + S+T S P +R T IP + S P+PP A+PP
Sbjct: 904 APKQAPALSMT--SSSPKKARA---------TPAPKGIPASPSPKGAPTPPAATPP 948
Score = 36.6 bits (83), Expect = 0.058
Identities = 77/339 (22%), Positives = 112/339 (33%), Gaps = 63/339 (18%)
Query: 64 AGREGEAQPVLVPIAVKQAQHRAAPGFMCLQEHQSLPGLPEPPPGSEVP--------RAA 115
+ +EG P P H+ P M + P +P P P +A
Sbjct: 1364 SSKEGPTPPAATP------SHKGGPA-MTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAP 1416
Query: 116 ASWQEREGPCGTGKGEVTERWSQGQEEGQRQLETAVQLRKALVGDRGVIPQACSQSWLSL 175
A+ REG KG++T T V L+KA P +
Sbjct: 1417 ATPVTREGAATPSKGDLTP-----------PAVTPVSLKKA--------PATSAPKGGPA 1457
Query: 176 PPELADFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLT 235
P V+P S P A S S ++ T P + ++
Sbjct: 1458 TPSSKGDPTLPAVTPPSPKEPPAPKQV-------ATSSSPKKAPATPAPMGAPTLPAVIP 1510
Query: 236 CSAGEPPTTGGKLTGP----ARLRSSRAPPPARRPLPCESLRTPSGTA-GPRSPASGPDA 290
S E P T P A L S + P P E+L P+ T P+ + P
Sbjct: 1511 SSPKEVPATPSSRRDPIAPTATLLSKKTPATLA---PKEALIPPAMTVPSPKKTPAIPTP 1567
Query: 291 RGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRS--SSVTI 348
+ AP ++ + + TP+T G P P+ L L+P AV S + T
Sbjct: 1568 KEAPATPSSKEASSPPAVTPSTYK--GAPSPKEL---------LIPPAVTSPSPKEAPTP 1616
Query: 349 DHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPP 387
P S G A GT S + +SL +P+ P
Sbjct: 1617 PAVTPPSPEKGPATPAPKGTPTSPPVT-PSSLKDSPTSP 1654
Score = 34.7 bits (78), Expect = 0.22
Identities = 41/154 (26%), Positives = 52/154 (33%), Gaps = 58/154 (37%)
Query: 240 EPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRA 299
E P T PA +S +P AR T P+ + P +GAPTP
Sbjct: 898 EGPATPAPKQAPALSMTSSSPKKAR------------ATPAPKGIPASPSPKGAPTP--- 942
Query: 300 RGGGASWSATPTTIP-GPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRG 358
+ATP + GP P P+ P PAA P S +G
Sbjct: 943 ------PAATPPSPKGGPATPSPKWAPTP--------PAAT-------------PPSPKG 975
Query: 359 GGARRLRAGTGVSSQIPYTASLTPTPSPPRASPP 392
G P T S P+PP A+PP
Sbjct: 976 G---------------PATPSPKGAPTPPAATPP 994
>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
Length = 957
Score = 48.5 bits (114), Expect = 1e-05
Identities = 86/363 (23%), Positives = 126/363 (34%), Gaps = 86/363 (23%)
Query: 80 KQAQHRAAPGFMCLQEHQSLPGLPEPPPGSEVPRAAASWQEREGPCGTGKGEVTERWSQG 139
K H ++ G M + + PGLP PGS+VP+ + Q +G C S+G
Sbjct: 17 KATAHNSSWGEM---QAPNAPGLPADVPGSDVPQGPSDSQILQGLCA----------SEG 63
Query: 140 QEEGQRQLETAVQLRKALVGDRGVIPQACSQSWLSLPPELADFCLCQRVSPASCPSRSCP 199
V+P + +PP +++ S AS
Sbjct: 64 P-------------------STSVLPTSAEGPSTFVPPTISE------ASSASGQPTISE 98
Query: 200 SAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLTC---------SAGEPPTTGGKLTG 250
+L + S TSGP T+S GL T + PPT+ + +
Sbjct: 99 GPGTSVLPTPSEGLS------TSGP--PTISKGLCTSVTLAASEGRNTSRPPTSSEEPST 150
Query: 251 PARLRSSRAPPPARRPLPCESLRT---PSGTAGPR-----SPASGPDARGAPTPGRARGG 302
+S P + P P E T P+ GP +P GP PTPG G
Sbjct: 151 SVPPTASEVPSTSLPPTPGEGTSTSVPPTAYEGPSTSVVPTPDEGPSTSVLPTPGEGPGT 210
Query: 303 GASWSAT---PTTIPGPGPPRPQLLVIPRTSR---CRLVPAAVVGRSSSVTIDHSR---- 352
+AT T++ P V P + + P G S+SV
Sbjct: 211 SVPLAATEGLSTSVQATPDEGPSTSVPPTATEGLSTPVPPTRDEGPSTSVPATPGEGPST 270
Query: 353 ---PASSRGGGARRL-RAGTGVSSQIPYTA------SLTPTPSPPRASPPPFSPLYLGGH 402
PA+S G + G G S+ +P TA S+ PT ++ P +P GG
Sbjct: 271 SVLPAASDGQSISLVPTRGKGSSTSVPPTATEGLSTSVQPTAGEGSSTSVPPTP---GGG 327
Query: 403 LRT 405
L T
Sbjct: 328 LST 330
Score = 38.5 bits (88), Expect = 0.015
Identities = 61/205 (29%), Positives = 75/205 (36%), Gaps = 43/205 (20%)
Query: 199 PSAAVFILAVAARSCSR--RRRVGTSGPEASTLSSGLLTC---SAGE------PPTTGGK 247
PS +V A +S S R G+S T + GL T +AGE PPT GG
Sbjct: 268 PSTSVLPAASDGQSISLVPTRGKGSSTSVPPTATEGLSTSVQPTAGEGSSTSVPPTPGGG 327
Query: 248 LTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGASWS 307
L S+ PP A L T+ P +P GP P PG G S S
Sbjct: 328 L-------STSVPPTATEEL---------STSVPPTPGEGPSTSVLPIPGE----GLSTS 367
Query: 308 ATPTTIPGPGPPRPQLLVIPRTSRCRLV-PAAVVGRSSSVTIDHSRPASSRGGGARRLRA 366
PT G P P LV P A G SSV + G G L +
Sbjct: 368 VPPTASDGSDTSVPP---TPGEGASTLVQPTAPDGPGSSV-------LPNPGEGPSTLFS 417
Query: 367 GTGVSSQIPYTASLT-PTPSPPRAS 390
+ + P SL P+P +AS
Sbjct: 418 SSASVDRNPSKCSLVLPSPRVTKAS 442
>gi|23510413 sorting nexin 26 [Homo sapiens]
Length = 1126
Score = 48.1 bits (113), Expect = 2e-05
Identities = 55/177 (31%), Positives = 72/177 (40%), Gaps = 22/177 (12%)
Query: 237 SAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCES--------LRTPSGTAGPRSPASGP 288
SAG P L P L S P+ R L E L TP+ P++PAS
Sbjct: 516 SAGLDPAGRCLLPRPKSLAGSC---PSTRLLTLEEAQARTQGRLGTPTEPTTPKAPASPA 572
Query: 289 DAR-GAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVT 347
+ R G + + GG+SW GP PR + L P R P R +VT
Sbjct: 573 ERRKGERGEKQRKPGGSSWKTFFALGRGPSVPRKKPL--PWLGGTRAPPQPSGSRPDTVT 630
Query: 348 IDHSR---PASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPPPFSPLYLGG 401
+ ++ SS+ GA L AG P +A+ TP SP R+ P PL L G
Sbjct: 631 LRSAKSEESLSSQASGAELLGAGGA-----PASATPTPALSPGRSLRPHLIPLLLRG 682
Score = 38.5 bits (88), Expect = 0.015
Identities = 45/149 (30%), Positives = 62/149 (41%), Gaps = 25/149 (16%)
Query: 254 LRSSRAPPPARRPLP-CESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGASWSATPTT 312
L +RAPP P +LR+ S ASG + GA GGA SATPT
Sbjct: 612 LGGTRAPPQPSGSRPDTVTLRSAKSEESLSSQASGAELLGA--------GGAPASATPTP 663
Query: 313 IPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSS 372
PG R+ R L+P + G + +T + S+ GA+ G + S
Sbjct: 664 ALSPG----------RSLRPHLIPLLLRGAEAPLTDACQQEMCSKLRGAQG-PLGPDMES 712
Query: 373 QI--PYTASLTPTPSPPRASPPPFSPLYL 399
+ P + L P +PP PPP +P L
Sbjct: 713 PLPPPPLSLLRPGGAPP---PPPKNPARL 738
Score = 34.3 bits (77), Expect = 0.29
Identities = 42/146 (28%), Positives = 51/146 (34%), Gaps = 29/146 (19%)
Query: 251 PARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGASWSATP 310
P L S PARRP P E L + GPR P+ + +P A P
Sbjct: 986 PDHLGYSAPQHPARRPTPPEPLYV-NLALGPRGPSPASSSSSSPP------------AHP 1032
Query: 311 TTIPGPGPPRPQLLVIPRTSRCRLVPAAVVG----RSSSVTIDHSRPASSRGGGARR--- 363
+ PGPP P+L R P V G + + PA RGG R
Sbjct: 1033 RSRSDPGPPVPRLPQKQRAPWGPRTPHRVPGPWGPPEPLLLYRAAPPAYGRGGELHRGSL 1092
Query: 364 ----LRAGTGVSSQIPYTASLTPTPS 385
+ G G PY PTPS
Sbjct: 1093 YRNGGQRGEGAGPPPPY-----PTPS 1113
>gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo
sapiens]
Length = 946
Score = 47.8 bits (112), Expect = 3e-05
Identities = 59/195 (30%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 189 SPASCPSRSCPSAAVFILAVAARSCSRRRRV-GTSGPEASTLSSGLLTCSAGEPPTTGGK 247
SP+ CP RS +L ARS RR + G PE S SG G P +
Sbjct: 174 SPSPCPFRSSSQPPGRVLVQGARSEERRTKSWGEQCPETSGTDSG----RKGGPSLCSSQ 229
Query: 248 L-TGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGP------DARGAPTPGR-- 298
+ G L AP + P +R G P SP G D RG+PTPG
Sbjct: 230 VKKGMPPLPGRAAPTGSEAQGPSAFVRMEKGI--PASPRCGSPTAMEIDKRGSPTPGTRS 287
Query: 299 ------ARGGGASWSATPTT--IPGPGPPRPQLLVIPRTS-RCRLV-----PAAVVGRSS 344
G + AT + GP RPQ L + S R R + P A+V R
Sbjct: 288 CLAPSLGLFGASLTMATEVAARVTSTGPHRPQDLALTEPSGRARELEDLQPPEALVERQG 347
Query: 345 SVTIDHSRPASSRGG 359
+ PA RGG
Sbjct: 348 QFLGSETSPAPERGG 362
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 47.0 bits (110), Expect = 4e-05
Identities = 52/202 (25%), Positives = 66/202 (32%), Gaps = 44/202 (21%)
Query: 240 EPPTTGGKLTGPARL-RSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGA----- 293
+PP G P R R + A A P P + P +PA P A A
Sbjct: 100 QPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAP 159
Query: 294 PTPGRARGGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRP 353
P+PG A+ G + A P P P P P + P R R P AV R + P
Sbjct: 160 PSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPR-RAPPPAVAAREPPLPPPPQPP 218
Query: 354 ASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPPP-FSPLYLGGHLRTVFLQGTA 412
A + P PP+ PPP + GG R V L+
Sbjct: 219 APPQ-----------------------QQQPPPPQPQPPPEGGAVRAGGAARPVSLREVV 255
Query: 413 DETHQSLAAAFRHRHLGAESGA 434
R+LG GA
Sbjct: 256 -------------RYLGGSGGA 264
Score = 39.3 bits (90), Expect = 0.009
Identities = 36/147 (24%), Positives = 50/147 (34%), Gaps = 17/147 (11%)
Query: 256 SSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGA------SWSAT 309
++R PP R P R P G + A+ P P P A + +A
Sbjct: 96 AARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAA 155
Query: 310 PTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGGARRLRAGTG 369
T P PGP +P PR R + A ++ PA + G RR
Sbjct: 156 ATAPPSPGPAQPG----PRAQRAAPLAAPPPAPAAP-------PAVAPPAGPRRAPPPAV 204
Query: 370 VSSQIPYTASLTPTPSPPRASPPPFSP 396
+ + P P P + PPP P
Sbjct: 205 AAREPPLPPPPQPPAPPQQQQPPPPQP 231
Score = 31.2 bits (69), Expect = 2.4
Identities = 27/92 (29%), Positives = 35/92 (38%), Gaps = 23/92 (25%)
Query: 237 SAGEPPTTGGKLTGPARLRSS--RAPPPA--------------RRPLPCESLRTPSGTAG 280
+A PP+ G GP R++ APPPA R P P + R P
Sbjct: 155 AATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPP 214
Query: 281 PRSPA-------SGPDARGAPTPGRARGGGAS 305
P+ PA P + P G R GGA+
Sbjct: 215 PQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAA 246
Score = 30.4 bits (67), Expect = 4.2
Identities = 30/123 (24%), Positives = 39/123 (31%), Gaps = 12/123 (9%)
Query: 271 SLRTPSGTAGPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIPRTS 330
S R + PR A+ P AP A A+ TP P PP P P +
Sbjct: 92 SYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPP---PPAPVAAAAPARA 148
Query: 331 RCRLVPAAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRAS 390
AA S P ++ G + A P P+ PR +
Sbjct: 149 PRAAAAAATAPPS---------PGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRA 199
Query: 391 PPP 393
PPP
Sbjct: 200 PPP 202
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 46.6 bits (109), Expect = 6e-05
Identities = 80/324 (24%), Positives = 109/324 (33%), Gaps = 38/324 (11%)
Query: 91 MCLQEHQSLPG-LPEPPPGSEVPRAAASWQER-----EGPCGTGKGEVTERWSQGQEEGQ 144
+ L H LP + PPPGS + A R + + G + S Q +
Sbjct: 793 IALTHHPRLPAAIFRPPPGSGLGNLGAGQTPRHLKRLQSLIPSALGSASPASSPSQVDTP 852
Query: 145 RQLETAVQLRKALVGDRGVIPQACSQSWLSLPPELADFCLCQRVSPASCPSRSCPSAAVF 204
+Q G+ P S S S PP P +C S S P+ +
Sbjct: 853 SSSSFHIQQLAGFSAPAGLSPLLPSSS--SSPP------------PGACGSPSAPTPSAG 898
Query: 205 ILAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPAR 264
+ A + G S+ S LLT P G + P + S APP AR
Sbjct: 899 VAATTIAGFGHFHKA--LGGSLSSSDSPLLT-----PLQPGAR--SPQAAQPSPAPPGAR 949
Query: 265 RPL--PCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQ 322
L P L P + RSP+S P G P + G +TP T P P P
Sbjct: 950 GGLGLPEHFLPPPPSS---RSPSSSPGQLGQPPGELSLGLATGPLSTPET--PPRQPEPP 1004
Query: 323 LLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTP 382
LV + P R HS A +G+ S +P +S P
Sbjct: 1005 SLVAGASGGAS--PVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPP 1062
Query: 383 TPSPPRASPPPFSPLYLGGHLRTV 406
P R PP +P L L+ +
Sbjct: 1063 PQVPQRRGTPPLTPGRLTQDLKLI 1086
Score = 33.5 bits (75), Expect = 0.49
Identities = 48/181 (26%), Positives = 63/181 (34%), Gaps = 34/181 (18%)
Query: 224 PEASTLSSGLLTCSAGEPP--TTGGKLTGPARLRSSRAPPPARRPLPCESLR-------- 273
P S+ S G+PP + G TGP L + PP R+P P +
Sbjct: 961 PPPSSRSPSSSPGQLGQPPGELSLGLATGP--LSTPETPP--RQPEPPSLVAGASGGASP 1016
Query: 274 ---TPSGTAGPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIPRTS 330
TP G P + GP P RA G S P + P P P+
Sbjct: 1017 VGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPP----------PQVP 1066
Query: 331 RCRLVPAAVVGRSSS--VTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPR 388
+ R P GR + I S+PA + G RA S + S+ P PR
Sbjct: 1067 QRRGTPPLTPGRLTQDLKLISASQPALPQDGAQTLRRASPHSSGE-----SMAAFPLFPR 1121
Query: 389 A 389
A
Sbjct: 1122 A 1122
>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
Length = 548
Score = 46.6 bits (109), Expect = 6e-05
Identities = 51/185 (27%), Positives = 67/185 (36%), Gaps = 27/185 (14%)
Query: 221 TSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGT-- 278
TSGP + L+S A P P+ + ++++ PP P ES R G
Sbjct: 332 TSGPATTPLAS------APRPAAPANNPPPPSLMSTTQSRPPWMNSGPSES-RPYHGMHG 384
Query: 279 AGPRSPASGPDARGAPTPGRARG-GGASWSATPTTIPGPG--PPRPQLLVIPRTSRCRLV 335
GP P GP + P P G GG P P P PP P + P
Sbjct: 385 GGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPP----- 439
Query: 336 PAAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPP---RASPP 392
G +D ++ G G RL G G+ P + P P PP + PP
Sbjct: 440 -----GHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM--GMMPPPPPPPSGQPPPP 492
Query: 393 PFSPL 397
P PL
Sbjct: 493 PSGPL 497
Score = 43.5 bits (101), Expect = 5e-04
Identities = 47/177 (26%), Positives = 59/177 (33%), Gaps = 36/177 (20%)
Query: 242 PTTGGKLTGPARLRSSRAP---PPARRPLPCESLRT-----------PSGT--------A 279
P + G +GPA + AP PA P P + T PS +
Sbjct: 326 PASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGG 385
Query: 280 GPRSPASGPDARGAPTPGRARG-GGASWSATPTTIPGP--GPPRPQLLVIPRTSRCRLVP 336
GP P GP + P P G GG P P P PP P + P
Sbjct: 386 GPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPP------ 439
Query: 337 AAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPPP 393
G +D ++ G G RL G G+ P + P P PP PPP
Sbjct: 440 ----GHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPP-PPMGMMPPPPPPPSGQPPP 491
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 46.6 bits (109), Expect = 6e-05
Identities = 51/185 (27%), Positives = 67/185 (36%), Gaps = 27/185 (14%)
Query: 221 TSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGT-- 278
TSGP + L+S A P P+ + ++++ PP P ES R G
Sbjct: 332 TSGPATTPLAS------APRPAAPANNPPPPSLMSTTQSRPPWMNSGPSES-RPYHGMHG 384
Query: 279 AGPRSPASGPDARGAPTPGRARG-GGASWSATPTTIPGPG--PPRPQLLVIPRTSRCRLV 335
GP P GP + P P G GG P P P PP P + P
Sbjct: 385 GGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPP----- 439
Query: 336 PAAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPP---RASPP 392
G +D ++ G G RL G G+ P + P P PP + PP
Sbjct: 440 -----GHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM--GMMPPPPPPPSGQPPPP 492
Query: 393 PFSPL 397
P PL
Sbjct: 493 PSGPL 497
Score = 43.5 bits (101), Expect = 5e-04
Identities = 47/177 (26%), Positives = 59/177 (33%), Gaps = 36/177 (20%)
Query: 242 PTTGGKLTGPARLRSSRAP---PPARRPLPCESLRT-----------PSGT--------A 279
P + G +GPA + AP PA P P + T PS +
Sbjct: 326 PASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGG 385
Query: 280 GPRSPASGPDARGAPTPGRARG-GGASWSATPTTIPGP--GPPRPQLLVIPRTSRCRLVP 336
GP P GP + P P G GG P P P PP P + P
Sbjct: 386 GPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPP------ 439
Query: 337 AAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPPP 393
G +D ++ G G RL G G+ P + P P PP PPP
Sbjct: 440 ----GHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPP-PPMGMMPPPPPPPSGQPPP 491
Score = 32.0 bits (71), Expect = 1.4
Identities = 42/176 (23%), Positives = 61/176 (34%), Gaps = 45/176 (25%)
Query: 226 ASTLSSGLLTCSAGE---PPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPR 282
++ + SG+ G+ PP G + P S + PPP PLP + P
Sbjct: 453 STPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLP--PWQQQQQQPPPP 510
Query: 283 SPASGPDARGAPTPGRARGGGASWSATPTTIPGPG--PPRPQLLVIPRTSRCRLVPAAVV 340
P S A P P + + T TT G G PP Q
Sbjct: 511 PPPSSSMASSTPLPWQQN------TTTTTTSAGTGSIPPWQQ------------------ 546
Query: 341 GRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPPPFSP 396
+ A++ GA +++ G + +P + P P PP A PPP P
Sbjct: 547 ----------QQAAAAASPGAPQMQ---GNPTMVPLPPGVQP-PLPPGAPPPPPPP 588
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 46.2 bits (108), Expect = 7e-05
Identities = 61/211 (28%), Positives = 78/211 (36%), Gaps = 39/211 (18%)
Query: 217 RRVGTSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAP-PPARRPLPCESLRTP 275
R T P+ S LS+G ++G P T PA R SRA P P S R
Sbjct: 144 RGKATEAPKRSALSAGARRDTSGPTPGT----PSPAMARRSRAAGTEVGLPRPAPSARPR 199
Query: 276 SGTAGPRSPASG----------PDARGAPTPG----RARGGGASWSATPTTIPG------ 315
T GPR S P AR P+ G R S SATP + P
Sbjct: 200 PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSA 259
Query: 316 ---------PGPPRP---QLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGGARR 363
P P+P Q L P+ + R A +G SS + P+++ A
Sbjct: 260 RGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPP 319
Query: 364 LRAGTGVSSQIPYTASLTPTP-SPPRASPPP 393
T SS + + TP P +PP S PP
Sbjct: 320 TLPATPHSSSLTCQLA-TPLPLAPPSPSAPP 349
Score = 43.1 bits (100), Expect = 6e-04
Identities = 52/181 (28%), Positives = 72/181 (39%), Gaps = 12/181 (6%)
Query: 220 GTSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTA 279
G P A S G ++ TT G LR S A R E+ + + +A
Sbjct: 100 GERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRIS-AEETVARGKATEAPKRSALSA 158
Query: 280 GPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPP-RPQLLVIPRTSRCRLVPAA 338
G R SGP G P+P AR A+ T +P P P RP+ P T R ++
Sbjct: 159 GARRDTSGPTP-GTPSPAMARRSRAA--GTEVGLPRPAPSARPR----PPTEGPRKSVSS 211
Query: 339 VVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPS---PPRASPPPFS 395
S++ +R S GGG +R + + SS P ++ PS PRA P
Sbjct: 212 ASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQ 271
Query: 396 P 396
P
Sbjct: 272 P 272
Score = 41.2 bits (95), Expect = 0.002
Identities = 94/406 (23%), Positives = 136/406 (33%), Gaps = 59/406 (14%)
Query: 51 PRGLEELWVAKLVAGREGEAQPVLVPIAVKQAQHRAAPGFMCLQEHQSLPGLPEPPPGSE 110
P+GL+ L ++ R+ +A P L P++ + A P + Q+ P LP P S
Sbjct: 274 PKGLQALRPPQVTPPRK-DAAPALGPLS---SSPLATPSPSAALQSQAPPTLPATPHSSS 329
Query: 111 V--------------PRAAASWQEREGPCGTGKGEVTERWSQGQEEGQRQLETAVQLRKA 156
+ P A S Q P T + T + + L
Sbjct: 330 LTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPL-SP 388
Query: 157 LVGDRGVIPQACSQSWLSLPPELADFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSRR 216
L P A + L PP +SP + PS P+A L A S
Sbjct: 389 LATPPPQAPPALALPPLQAPPSPP---ASPPLSPLATPSPQAPNALAVHLLQAPFSPP-- 443
Query: 217 RRVGTSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPS 276
S P + S PP + P+ S+APP SL P
Sbjct: 444 ----PSPPVQAPFSP------PASPPVS------PSATPPSQAPP---------SLAAPP 478
Query: 277 GTAGPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVP 336
P PAS P + A P +A +A P + P P P L P P
Sbjct: 479 LQVPPSPPASPPMSPSATPPPQAP---PPLAAPPLQLAKPPPQAPPALATPPLQALPSPP 535
Query: 337 AAVVGR---SSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPPP 393
A+ G+ S S ++ S A+ L A Q+P + +PT PR P P
Sbjct: 536 ASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPL---LQVPPSPPASPTLQAPRRPPTP 592
Query: 394 FSPLYLGGHLRTVFL-QGTADETHQSLAAAFRHRHLGAESGAVSST 438
+ G T+ L G +S ++ L S + +ST
Sbjct: 593 GPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATST 638
Score = 34.7 bits (78), Expect = 0.22
Identities = 58/209 (27%), Positives = 71/209 (33%), Gaps = 22/209 (10%)
Query: 191 ASCPSRSCPSAAVFILAV-----AARSCSRRRRVGTSGPEASTLSSGLLTCSAGEPPTTG 245
A+ P ++ P A +L V A+ + RR T GP+ S L A PP
Sbjct: 556 ATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPP- 614
Query: 246 GKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRS-PASGPDARGAPTPGRARGGGA 304
P+R SS P + TP G S P G A P A A
Sbjct: 615 -----PSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPA 669
Query: 305 SWS---ATPTTIPG-PGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVT-----IDHSRPAS 355
+WS A P G PG P P S L S T +D P+
Sbjct: 670 AWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPG-PSP 728
Query: 356 SRGGGARRLRAGTGVSSQIPYTASLTPTP 384
GG AG G SS+ P A L P
Sbjct: 729 GTSGGKAAAGAGAGASSRSPKQARLGELP 757
Score = 31.2 bits (69), Expect = 2.4
Identities = 38/137 (27%), Positives = 51/137 (37%), Gaps = 7/137 (5%)
Query: 260 PPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGAS-WSATPTTIPGP-G 317
P A R P S T S R PASG R P + G +S A+ TT PGP G
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLG 130
Query: 318 PPRPQLLVIPRTSRCRLVPA---AVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQI 374
++ +R + A + + + P + ARR RA G +
Sbjct: 131 QKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRA-AGTEVGL 189
Query: 375 PYTASLTPTPSPPRASP 391
P A + P PP P
Sbjct: 190 PRPAP-SARPRPPTEGP 205
Score = 31.2 bits (69), Expect = 2.4
Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 221 TSGPEASTLSSGLLTCSAGEPPTTGGK-LTGPARLRSSRAPPPAR-RPLPCESLRTP--- 275
T GPE++T + G L P T+GGK G SSR+P AR LP +L+
Sbjct: 709 TEGPESATPAPGALD-PGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQ 767
Query: 276 --SGTAGPRSPASGPDARGAPTPGRARGGGASWSA 308
+ A G PG A GGG + A
Sbjct: 768 HLLSRTLLLAAAEGAAGGSGGGPGGAEGGGVTGGA 802
Score = 30.0 bits (66), Expect = 5.4
Identities = 38/146 (26%), Positives = 50/146 (34%), Gaps = 23/146 (15%)
Query: 190 PASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGEPPTTGGKLT 249
P+ PS + + + +A S R SGPE +A PP
Sbjct: 615 PSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGA--------AASPPPDAELAAC 666
Query: 250 GPARLRSSRAPPPARR-----PLP---------CESLRTPSGTAGPRSPASGPDARG-AP 294
PA APP A R PLP + L T T GP S P A P
Sbjct: 667 HPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGP 726
Query: 295 TPGRARGGGASWSATPTTIPGPGPPR 320
+PG + G A+ + + P R
Sbjct: 727 SPGTSGGKAAAGAGAGASSRSPKQAR 752
>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
Length = 447
Score = 46.2 bits (108), Expect = 7e-05
Identities = 45/154 (29%), Positives = 62/154 (40%), Gaps = 14/154 (9%)
Query: 226 ASTLSSGLLTCSAGEP--PTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRS 283
A S+GL +G P P G+ P SSR P +R + + GP
Sbjct: 279 APRTSAGLAGVGSGAPGEPAEPGRARAPRSAPSSREPRQTKRRVGSRARAGAGAVTGP-C 337
Query: 284 PASGPDARGA-PTPGRARGGGASWSATPTTIPGPGPP--RPQLLVIPRTSRCRLVPAAVV 340
PA+ ARG+ P+P G + A PT+ P P P P L R R LVP +
Sbjct: 338 PAAAQGARGSWPSPRCLPSDGGAREAPPTSAPHPRRPAGSPPALA-DREGRRSLVPQTSI 396
Query: 341 GRSSSVTIDHSRPASSRGG-------GARRLRAG 367
+ + +RP + + G R LRAG
Sbjct: 397 QGQNFAQLSLARPWAGKRGHRQREPEALRALRAG 430
Score = 36.6 bits (83), Expect = 0.058
Identities = 44/141 (31%), Positives = 53/141 (37%), Gaps = 35/141 (24%)
Query: 258 RAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPG 317
R P P PLP + RT +G AG S A G A PGRAR P + P
Sbjct: 268 RLPDPI--PLPTRAPRTSAGLAGVGSGAPGEPAE----PGRAR--------APRSAPSSR 313
Query: 318 PPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGGAR------RLRAGTGVS 371
PR + SR R AV G P + GAR R G +
Sbjct: 314 EPRQTKRRV--GSRARAGAGAVTG-----------PCPAAAQGARGSWPSPRCLPSDGGA 360
Query: 372 SQIPYTASLTPTPSPPRASPP 392
+ P T++ P P P SPP
Sbjct: 361 REAPPTSA--PHPRRPAGSPP 379
>gi|116734706 interferon regulatory factor 2 binding protein 2
isoform B [Homo sapiens]
Length = 571
Score = 46.2 bits (108), Expect = 7e-05
Identities = 69/265 (26%), Positives = 101/265 (38%), Gaps = 53/265 (20%)
Query: 138 QGQEEGQRQLETAVQLRKALVGDRGVIPQACSQSWLSLPPELADFCLCQRVSPASCPSRS 197
+G + + +ETA QL++A G P+ S PP A AS ++
Sbjct: 44 EGADRVEFVIETARQLKRA----HGCFPEGRS------PPGAA----------ASAAAKP 83
Query: 198 CPSAAVFILAVAARSCSRRRRVGTSGPEAS-----TLSSGLLTCSAGEPPTTGGKLTGPA 252
P +A IL +++++G GPEA+ L L +A PP G G +
Sbjct: 84 PPLSAKDILL------QQQQQLGHGGPEAAPRAPQALERYPLAAAAERPPRLGSDF-GSS 136
Query: 253 RLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDA-RGAPTPGRARGGGASWSATPT 311
R +S A PP +P P + P+G + P P+ R +P P R + PT
Sbjct: 137 RPAASLAQPPTPQPPPVNGILVPNGFSKLEEP---PELNRQSPNPRRGH------AVPPT 187
Query: 312 TIP---GPGPPRPQLLVIPRTSRCRL-----VPAAVVGRSSSVTID-HSRPASSRGGGA- 361
+P G P P L + + L AA +G + + H RPAS A
Sbjct: 188 LVPLMNGSATPLPTALGLGGRAAASLAAVSGTAAASLGSAQPTDLGAHKRPASVSSSAAV 247
Query: 362 -RRLRAGTGVSSQIPYTASLTPTPS 385
R Q P A P S
Sbjct: 248 EHEQREAAAKEKQPPPPAHRGPADS 272
>gi|116734704 interferon regulatory factor 2 binding protein 2
isoform A [Homo sapiens]
Length = 587
Score = 46.2 bits (108), Expect = 7e-05
Identities = 69/265 (26%), Positives = 101/265 (38%), Gaps = 53/265 (20%)
Query: 138 QGQEEGQRQLETAVQLRKALVGDRGVIPQACSQSWLSLPPELADFCLCQRVSPASCPSRS 197
+G + + +ETA QL++A G P+ S PP A AS ++
Sbjct: 44 EGADRVEFVIETARQLKRA----HGCFPEGRS------PPGAA----------ASAAAKP 83
Query: 198 CPSAAVFILAVAARSCSRRRRVGTSGPEAS-----TLSSGLLTCSAGEPPTTGGKLTGPA 252
P +A IL +++++G GPEA+ L L +A PP G G +
Sbjct: 84 PPLSAKDILL------QQQQQLGHGGPEAAPRAPQALERYPLAAAAERPPRLGSDF-GSS 136
Query: 253 RLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDA-RGAPTPGRARGGGASWSATPT 311
R +S A PP +P P + P+G + P P+ R +P P R + PT
Sbjct: 137 RPAASLAQPPTPQPPPVNGILVPNGFSKLEEP---PELNRQSPNPRRGH------AVPPT 187
Query: 312 TIP---GPGPPRPQLLVIPRTSRCRL-----VPAAVVGRSSSVTID-HSRPASSRGGGA- 361
+P G P P L + + L AA +G + + H RPAS A
Sbjct: 188 LVPLMNGSATPLPTALGLGGRAAASLAAVSGTAAASLGSAQPTDLGAHKRPASVSSSAAV 247
Query: 362 -RRLRAGTGVSSQIPYTASLTPTPS 385
R Q P A P S
Sbjct: 248 EHEQREAAAKEKQPPPPAHRGPADS 272
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 45.8 bits (107), Expect = 1e-04
Identities = 48/178 (26%), Positives = 62/178 (34%), Gaps = 22/178 (12%)
Query: 221 TSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGT-- 278
TSGP + L+S A P P+ + ++++ PP P ES R G
Sbjct: 332 TSGPATTPLAS------APRPAAPANNPPPPSLMSTTQSRPPWMNSGPSES-RPYHGMHG 384
Query: 279 AGPRSPASGPDARGAPTPGRARG-GGASWSATPTTIPGPG--PPRPQLLVIPRTSRCRLV 335
GP P GP + P P G GG P P P PP P + P
Sbjct: 385 GGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPP----- 439
Query: 336 PAAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPPP 393
G +D ++ G G RL G G+ P P P P PPP
Sbjct: 440 -----GHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPP 492
Score = 43.5 bits (101), Expect = 5e-04
Identities = 47/177 (26%), Positives = 59/177 (33%), Gaps = 36/177 (20%)
Query: 242 PTTGGKLTGPARLRSSRAP---PPARRPLPCESLRT-----------PSGT--------A 279
P + G +GPA + AP PA P P + T PS +
Sbjct: 326 PASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGG 385
Query: 280 GPRSPASGPDARGAPTPGRARG-GGASWSATPTTIPGP--GPPRPQLLVIPRTSRCRLVP 336
GP P GP + P P G GG P P P PP P + P
Sbjct: 386 GPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPP------ 439
Query: 337 AAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPPP 393
G +D ++ G G RL G G+ P + P P PP PPP
Sbjct: 440 ----GHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPP-PPMGMMPPPPPPPSGQPPP 491
Score = 32.7 bits (73), Expect = 0.84
Identities = 44/179 (24%), Positives = 60/179 (33%), Gaps = 35/179 (19%)
Query: 226 ASTLSSGLLTCSAGE---PPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPR 282
++ + SG+ G+ PP G + P S + PPP PLP + P
Sbjct: 453 STPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLP--PWQQQQQQPPPP 510
Query: 283 SPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGR 342
P S A P P + + T TT G G IP + + AA G
Sbjct: 511 PPPSSSMASSTPLPWQQN------TTTTTTSAGTGS-------IPPWQQQQAAAAASPG- 556
Query: 343 SSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRA-----SPPPFSP 396
A G + GV +P A P P PP + +PPP P
Sbjct: 557 -----------APQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPP 604
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 45.4 bits (106), Expect = 1e-04
Identities = 52/198 (26%), Positives = 67/198 (33%), Gaps = 39/198 (19%)
Query: 237 SAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPA----------S 286
+A P PA + APPP P P R P AGP + A +
Sbjct: 247 AAPPAPAAPSPPAAPAPAAPAAAPPPPP-PAPATLARPPGHPAGPPTAAPAVPPPAAAQN 305
Query: 287 GPDARGAPTPGRARGGGASWSATP-----TTIPGPG-------------PPRPQLLVI-- 326
G A AP P A GG A S P P PG PP Q L
Sbjct: 306 GGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASG 365
Query: 327 PRTSRCRLV--PAAVVGRSSSVTIDHSRPASSRG------GGARRLRAGTGVSSQIPYTA 378
P ++ +V P S + P + G G + + T ++ A
Sbjct: 366 PASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIRA 425
Query: 379 SLTPTPSPPRASPPPFSP 396
+LTPT PR PP +P
Sbjct: 426 TLTPTVLAPRLPQPPQNP 443
Score = 43.9 bits (102), Expect = 4e-04
Identities = 58/187 (31%), Positives = 71/187 (37%), Gaps = 38/187 (20%)
Query: 274 TPSGTAG--PRSPASG-PDARGAPTP-GRAR--GGGASWSATPTT----IP-GPGPPRPQ 322
+P+G AG P +PA G P A P P GRAR GGG P+ +P GP PP +
Sbjct: 66 SPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAK 125
Query: 323 LLVIPRTS--RCRLVPAAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASL 380
L P S C VPAA + + PA G A RAG G
Sbjct: 126 LRPPPEGSAGSCAPVPAAAAVAAGPEPAP-AGPAKPAGPAALAARAGPG----------- 173
Query: 381 TPTPSP-PRASPPPFSPLYLGGHLRTVFLQGTADETHQSLAAAFRHRHLGAESGAVSSTN 439
P P P P P P P G A +T AA H A + ++ +
Sbjct: 174 -PGPGPGPGPGPGPGKPAGPG-----------AAQTLNGSAALLNSHHAAAPAVSLVNNG 221
Query: 440 AVAALSL 446
A L L
Sbjct: 222 PAALLPL 228
Score = 41.6 bits (96), Expect = 0.002
Identities = 81/327 (24%), Positives = 106/327 (32%), Gaps = 55/327 (16%)
Query: 97 QSLPGL-PEPPPGSEVPRAAASWQEREGPCGTGKGEVTERWSQGQEEGQRQLETAVQLRK 155
+ PG PEPPP R +R GP + V A +LR
Sbjct: 80 EGAPGAAPEPPPAGRA-RPGGGGPQRPGPPSPRRPLVPAG----------PAPPAAKLRP 128
Query: 156 ALVGDRGVIPQACSQSWLSLPPELADFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSR 215
G G + + ++ PE A + PA+ +R+ P
Sbjct: 129 PPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPG--PGPGPGPGP 186
Query: 216 RRRVGTSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTP 275
+ G + S+ LL P GPA L P PA P ++TP
Sbjct: 187 GKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLP--LPKPAA---PGTVIQTP 241
Query: 276 S--GTAGPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIP------ 327
G A P +PA+ P AP P A P P P PP P L P
Sbjct: 242 PFVGAAAPPAPAA-PSPPAAPAP-----------AAPAAAPPPPPPAPATLARPPGHPAG 289
Query: 328 RTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQI-PYTASLTPTP-- 384
+ VP ++ PA + GG A GVS Q P A+ P P
Sbjct: 290 PPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPA-------GVSGQPGPGAAAAAPAPGV 342
Query: 385 ---SPPR---ASPPPFSPLYLGGHLRT 405
SP R A+PP L G T
Sbjct: 343 KAESPKRVVQAAPPAAQTLAASGPAST 369
Score = 30.8 bits (68), Expect = 3.2
Identities = 41/170 (24%), Positives = 63/170 (37%), Gaps = 31/170 (18%)
Query: 230 SSGLLTCSAGEPPT---TGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRS--- 283
++G +T S PT +G + T + + R P P + P ++ + P G RS
Sbjct: 404 AAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENG 463
Query: 284 -----PASGPDARGAPTPGRARGGGASWSATPT--------TIPGPGPPRPQLLVIPRT- 329
P A + + A ATPT T+ PG P V P T
Sbjct: 464 QLLMIPQQALAQMQAQAHAQPQTTMAPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTI 523
Query: 330 ------SRCRLVPAAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQ 373
++ + P+A + RS V +P GG A+ GT + Q
Sbjct: 524 IKQVSQAQTTVQPSATLQRSPGV-----QPQLVLGGAAQTASLGTATAVQ 568
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 45.1 bits (105), Expect = 2e-04
Identities = 90/339 (26%), Positives = 118/339 (34%), Gaps = 51/339 (15%)
Query: 79 VKQAQHRAAPGFMCLQEHQSLPGLPEPPPGSEVPRAAASWQEREGPCGTGKGEVTERWSQ 138
V+QA A PG M E + E + RAAA+ +E+ G V W
Sbjct: 41 VQQALRLAQPG-MGGAEAEDEEDADEDEDAAAARRAAAALEEQLEAL---PGLV---WDL 93
Query: 139 GQEEGQRQLETAVQLRKALVGDRGVIPQACSQSWLSLPPELADFCLCQRVSPASCPSRSC 198
GQ+ G LE+ L + G S PP + FC S +S R
Sbjct: 94 GQQLGDLSLESG-GLEQESGRSSGFYEDPSSTGGPDSPP--STFCGDSGFSGSSSYGRLG 150
Query: 199 PSAAVFILAVAARSCSRRRRVGTSGPEASTL--SSGLLTCSAGEPPTTGGKLTGP----- 251
PS I A R + +G + P A + + + S P T G GP
Sbjct: 151 PSEPRGIYA-----SERPKSLGDASPSAPEVVGARAAVPRSFSAPYPTAGGSAGPEACSS 205
Query: 252 ARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTP-----------GRAR 300
A R+ P PL ++R+P P P PDA GA P R R
Sbjct: 206 AERRARAGPFLTPSPLHAVAMRSPRPCGRP--PTDSPDAGGAGRPLDGYISALLRRRRRR 263
Query: 301 GGGASWSATPTTIPG--PGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRG 358
G G P T PG G PR Q V R P + P+ R
Sbjct: 264 GAGQ-----PRTSPGGADGGPRRQNSVRQRPPDASPSPGSARPARE--------PSLERV 310
Query: 359 GGARRLRAGTGVSSQIPYTASLTPTPSPPRASP-PPFSP 396
GG A + + + P P+ P A+P PP SP
Sbjct: 311 GGHPTSPAALSRAWASSWESEAAPEPAAPPAAPSPPDSP 349
Score = 30.0 bits (66), Expect = 5.4
Identities = 60/245 (24%), Positives = 75/245 (30%), Gaps = 52/245 (21%)
Query: 158 VGDRGVIPQACSQSWLS-----LPPELADFCLCQRVSPASCPSRSCPSAAVFILAVAARS 212
VG P A S++W S PE A SP P+ A +I A +
Sbjct: 310 VGGHPTSPAALSRAWASSWESEAAPEPA--APPAAPSPPDSPAEGRLVKAQYIPGAQAAT 367
Query: 213 CSRRRRVGTSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESL 272
R P T + E P G+ A R P AR+ +S
Sbjct: 368 RGLPGRAARRKPPPLTRGRSVEQSPPRERPRAAGRRGRMAEASGRRGSPRARKASRSQSE 427
Query: 273 RTPSGTAG--PRSPASGPDA-RGAPTPGRARGGGAS------------WSATP------- 310
+ G A P P P A R P P R R G A W +T
Sbjct: 428 TSLLGRASAVPSGPPKYPTAEREEPRPPRPRRGPAPTLAAQAAGSCRRWRSTAEIDAADG 487
Query: 311 ---------TTIPGPGP----PRPQLL--VIPRTSRCRLVPAAVVGRSSSVTIDHSRPAS 355
+PGPGP P+ +LL S C +GR PA
Sbjct: 488 RRVRPRAPAARVPGPGPSPSAPQRRLLYGCAGSDSECSAGRLGPLGRRG--------PAG 539
Query: 356 SRGGG 360
GGG
Sbjct: 540 GVGGG 544
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 44.7 bits (104), Expect = 2e-04
Identities = 39/118 (33%), Positives = 48/118 (40%), Gaps = 9/118 (7%)
Query: 187 RVSPASCPSRSCPSAAVFILAVAARSCSRRRRV----GTSGPEASTLSSGLLTCSAGEPP 242
R P SC +R CPS A L + R+R + PE + + L SA P
Sbjct: 63 RTHPGSCRAR-CPSPAAGGLRGPWTAAPGRQRADEGAAAARPERQRVWARRLPGSAAAPA 121
Query: 243 TTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRAR 300
L RL PPP R LP L + P SPA P +R AP PG A+
Sbjct: 122 PGRDAL----RLPPPPPPPPERPRLPPAGLAGGPADSAPPSPAPAPRSRPAPRPGHAQ 175
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 44.7 bits (104), Expect = 2e-04
Identities = 49/163 (30%), Positives = 65/163 (39%), Gaps = 22/163 (13%)
Query: 243 TTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPR-----SPASGPDARGAPTPG 297
TT T A + PPPA P P + P P SPAS + + G
Sbjct: 754 TTTTTTTTTATQEEEKKPPPALPPPPPLAKFPPPSQPQPPPPPPPSPASLLKSLASVLEG 813
Query: 298 RA---RGGGASWSATPTTIP----GPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDH 350
+ RG GA+ S P +P PGPP + P ++ + SSS
Sbjct: 814 QKYCYRGTGAAVSTRPGPLPTTQYSPGPPSGATALPPTSAAPSAQGSPQPSASSS----- 868
Query: 351 SRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPRASPPP 393
S+ ++S G AR RAG + P +TPT PP S PP
Sbjct: 869 SQFSTSGGPWARERRAG-----EEPVPGPMTPTQPPPPLSLPP 906
Score = 34.3 bits (77), Expect = 0.29
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 13/77 (16%)
Query: 245 GGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGA 304
G K GP R+ A PP +P+P +L PSG G +P R RG +
Sbjct: 189 GAKRGGPPVKRA--AEPPVVQPVPPAALSGPSGEEGL-----------SPGGKRRRGCNS 235
Query: 305 SWSATPTTIPGPGPPRP 321
+ P +P P PP P
Sbjct: 236 EQTGLPPGLPLPPPPLP 252
Score = 30.4 bits (67), Expect = 4.2
Identities = 33/122 (27%), Positives = 43/122 (35%), Gaps = 23/122 (18%)
Query: 266 PLPCE--SLRTPSGTAGPRSPASGPDARGAPTPGRARG-----GGASWS----------- 307
PLP S PSG ++ P A+G+P P + G W+
Sbjct: 831 PLPTTQYSPGPPSGATALPPTSAAPSAQGSPQPSASSSSQFSTSGGPWARERRAGEEPVP 890
Query: 308 --ATPTTIPGP---GPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGGAR 362
TPT P P P R + V+ SR VGRS++ D A G
Sbjct: 891 GPMTPTQPPPPLSLPPARSESEVLEEISRACETLVERVGRSATDPADPVDTAEPADSGTE 950
Query: 363 RL 364
RL
Sbjct: 951 RL 952
Score = 29.6 bits (65), Expect = 7.1
Identities = 48/192 (25%), Positives = 62/192 (32%), Gaps = 47/192 (24%)
Query: 215 RRRRVGTSGPEASTLSSGLLTC---SAGEPPTTGGKLTGPARLRSSRAPPPARRPLP--- 268
R RV S ++S + C + PP G T + SS P P
Sbjct: 361 RESRVQRSRMDSSVSPAATTACVPYAPSRPPGLPGTTTSSSSSSSSNTGLRGVEPNPGIP 420
Query: 269 -CESLRTPS------GTAGPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRP 321
+ +TP+ G GP + +S GAP +ATP PGP P
Sbjct: 421 GADHYQTPALEVSHHGRLGPSAHSSRKPFLGAP------------AATPHLSLPPGPSSP 468
Query: 322 QLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGVSSQIPYTASLT 381
PR R PA + G + R A G L GT
Sbjct: 469 PPPPCPRLLRPPPPPAWLKGPAC-------RAAREDGEILEELFFGT------------- 508
Query: 382 PTPSPPRASPPP 393
PPR +PPP
Sbjct: 509 --EGPPRPAPPP 518
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 44.7 bits (104), Expect = 2e-04
Identities = 73/297 (24%), Positives = 110/297 (37%), Gaps = 58/297 (19%)
Query: 186 QRVSPASCPSRSCPSAAVFILAVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGEPPTTG 245
+R +P+ P R PS + + +RR S P T S PP
Sbjct: 578 RRRTPSPPPRRRSPSPRRYSPPI-------QRRYSPSPPPKRR------TASPPPPPKRR 624
Query: 246 GKLTGPARLRSSRAPPPARRPLPCESLRTPS-------------GTAGPRSPASGPDARG 292
+ P + R S +PPP +R P R+PS T RSP P+ R
Sbjct: 625 ASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQ--PNKRH 682
Query: 293 APTPGRARGGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLV----------------P 336
+P+P R R S S P P+ + P T R V P
Sbjct: 683 SPSP-RPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSP 741
Query: 337 AAVVGRSSSVTIDHS-RPASSR----GGGARRLRAGTGVSSQIPYTASLTPTPSPPRASP 391
+V SSS ++ S PA+ + + T S +P + +PTPSP SP
Sbjct: 742 QSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSP---SP 798
Query: 392 PPFSPLYLGGHLRTVFLQGTADETHQSLAAAFRH-RHLGAESGAVSSTNAVAALSLA 447
P S GG + + D+ H+ +H +H ++ A ++ AV ++A
Sbjct: 799 PRNSDQEGGGKKK----KKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVTPAAIA 851
Score = 37.4 bits (85), Expect = 0.034
Identities = 53/166 (31%), Positives = 65/166 (39%), Gaps = 24/166 (14%)
Query: 237 SAGEPPTTGGKLTGPARLRSSRAPPPARR--PLPCESLRTPSGTAGPRSPA----SGP-D 289
S PPT + PA PPP RR P P RTPS RSP+ S P
Sbjct: 549 SPSPPPTRRRRSPSPA-------PPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQ 601
Query: 290 ARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTID 349
R +P+P R AS P P PP + + + R P RS S++
Sbjct: 602 RRYSPSPPPKR-RTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSP-VTKRRSPSLSSK 659
Query: 350 HSRPASSRGGGARRLRAGTGVSSQIPYTASLTPTPSPPR--ASPPP 393
H R SS R R S Q S +P P P+ +SPPP
Sbjct: 660 H-RKGSSPSRSTREAR-----SPQPNKRHSPSPRPRAPQTSSSPPP 699
Score = 35.0 bits (79), Expect = 0.17
Identities = 45/165 (27%), Positives = 60/165 (36%), Gaps = 26/165 (15%)
Query: 253 RLRSSRAPPPARRPLPCESLRTPSGTAGP------RSPASGPDAR----GAPTPGRARGG 302
R R SR+P P RR P R S + P RSP+ P+ + P P
Sbjct: 173 RRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKE 232
Query: 303 GASWSATPTT----IPGPGP-PRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSR 357
+ AT T+ +P P P P P+ + S+ RS S + SR S
Sbjct: 233 PSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRS 292
Query: 358 GGGARRLRAGTGVSSQIPYTASLTPTP---------SPPRASPPP 393
R R S Y+ P+P +PPR PPP
Sbjct: 293 PSHTRPRRRHRSRSRS--YSPRRRPSPRRRPSPRRRTPPRRMPPP 335
Score = 30.4 bits (67), Expect = 4.2
Identities = 44/151 (29%), Positives = 57/151 (37%), Gaps = 28/151 (18%)
Query: 252 ARLRS-SRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGASWSATP 310
+R RS SR+ +R P R + SP P R P+P R TP
Sbjct: 278 SRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRR---------TP 328
Query: 311 TTIPGPGPPRPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGGGARRLRAGTGV 370
P PPR + P R R A++ G SSS + SR +
Sbjct: 329 PRRMPP-PPRHRRSRSP-VRRRRRSSASLSGSSSSSSSSRSRSPPKK--------PPKRT 378
Query: 371 SSQIPYTASLTPTPSPPR--------ASPPP 393
SS T L+P+ SPPR A+PPP
Sbjct: 379 SSPPRKTRRLSPSASPPRRRHRPSPPATPPP 409
Score = 30.4 bits (67), Expect = 4.2
Identities = 35/124 (28%), Positives = 49/124 (39%), Gaps = 12/124 (9%)
Query: 210 ARSCSRRRRVGTSGPEASTLSSGLLTCSAGEPPTTGGKLTG--PARLR--SSRAPPPARR 265
+RS RRRR ++ S+ SS + + PP K T P + R S A PP RR
Sbjct: 341 SRSPVRRRRRSSASLSGSSSSSS--SSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRR 398
Query: 266 PLPCESLRTPSGTAGPRSPASG---PDARGAPTPGRARGGGASWSAT---PTTIPGPGPP 319
P P T +P +R + +PGR G T + P P P
Sbjct: 399 HRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPR 458
Query: 320 RPQL 323
+ +L
Sbjct: 459 KVEL 462
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 44.3 bits (103), Expect = 3e-04
Identities = 47/154 (30%), Positives = 50/154 (32%), Gaps = 31/154 (20%)
Query: 244 TGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGG 303
TGG LR PPP P GP P P G P P ARG G
Sbjct: 262 TGGVEAVKNELRRQAPPPP------------PPSRGGPPPPPPPPHNSGPPPP-PARGRG 308
Query: 304 A---SWSATPTTIPGPGPP-RPQLLVIPRTSRCRLVPAAVVGRSSSVTIDHSRPASSRGG 359
A S PT P P PP RP + V P P SS+ + P S G
Sbjct: 309 APPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGV 368
Query: 360 GARRLRAGTGVSSQIPYTASLTPTPSPPRASPPP 393
G P P P PP PPP
Sbjct: 369 G--------------PVAPPPPPPPPPPPGPPPP 388
Score = 43.9 bits (102), Expect = 4e-04
Identities = 48/171 (28%), Positives = 61/171 (35%), Gaps = 25/171 (14%)
Query: 241 PPTTGGKLTGPARLRSSRAPPPAR------------RPLPCESLRTPSGTAGPRSPA--- 285
PP G PAR R + PPP+R RP P+ P PA
Sbjct: 293 PPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPS 352
Query: 286 SGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLL------VIPRT--SRCRLVPA 337
S P P P G + P P PGPP P L +P T ++ L+
Sbjct: 353 SAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLPSDGDHQVPTTAGNKAALLDQ 412
Query: 338 AVVGRSSSVTIDHSRPASSRGGGA--RRLRAGTGVSSQIPYTASLTPTPSP 386
G +SRP S G A ++R G + S S PTP+P
Sbjct: 413 IREGAQLKKVEQNSRPVSCSGRDALLDQIRQGIQLKSVADGQESTPPTPAP 463
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,883,361
Number of Sequences: 37866
Number of extensions: 1811088
Number of successful extensions: 14328
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 1192
Number of HSP's that attempted gapping in prelim test: 10004
Number of HSP's gapped (non-prelim): 4639
length of query: 528
length of database: 18,247,518
effective HSP length: 107
effective length of query: 421
effective length of database: 14,195,856
effective search space: 5976455376
effective search space used: 5976455376
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.