Guide to the Human Genome
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Name: RAI14 Sequence: fasta or formatted (980aa) NCBI GI: 224809468
Description:

retinoic acid induced 14 isoform a

Referenced in:

Ankyrin Family
Additional Genes in Development

Other entries for this name:
alt mRNA [980aa] retinoic acid induced 14 isoform a
alt mRNA [980aa] retinoic acid induced 14 isoform a
alt prot [951aa] retinoic acid induced 14 isoform b
alt prot [972aa] retinoic acid induced 14 isoform c
alt prot [983aa] retinoic acid induced 14 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         72           3
 C cysteine            1.1         11           1
 D aspartate           4.9         48           2
 E glutamate          11.3        111           3
 F phenylalanine       1.1         11           2
 G glycine             2.8         27           1
 H histidine           2.8         27           2
 I isoleucine          3.5         34           1
 K lysine             11.0        108           2
 L leucine            11.6        114           3
 M methionine          2.3         23           1
 N asparagine          3.9         38           2
 P proline             2.6         25           4
 Q glutamine           7.4         73           3
 R arginine            3.2         31           2
 S serine             11.3        111           3
 T threonine           4.2         41           2
 V valine              5.7         56           2
 W tryptophan          0.1          1           1
 Y tyrosine            1.8         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   retinoic acid induced 14 isoform a 
RAI14                 1.000   retinoic acid induced 14 isoform a 
RAI14                 1.000   retinoic acid induced 14 isoform a 
RAI14                 0.989   retinoic acid induced 14 isoform d 
RAI14                 0.988   retinoic acid induced 14 isoform c 
RAI14                 0.960   retinoic acid induced 14 isoform b 
UACA                  0.178   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.176   uveal autoantigen with coiled-coil domains and ankyr...
ANKRD24               0.141   ankyrin repeat domain 24 
ANKRD35               0.134   ankyrin repeat domain 35 
ANKRD18B              0.062   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.062   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.062   PREDICTED: ankyrin repeat domain 18B 
ANKRD18A              0.058   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.058   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.058   PREDICTED: ankyrin repeat domain 18A 
ANKRD20A4             0.055   ankyrin repeat domain 20 family, member A4 
ANKRD20A3             0.055   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.054   ankyrin repeat domain 20 family, member A2 
ANKRD20A1             0.053   ankyrin repeat domain 20 family, member A1 
MYH9                  0.050   myosin, heavy polypeptide 9, non-muscle 
ANKRD50               0.050   ankyrin repeat domain 50 
CLIP1                 0.050   restin isoform b 
CLIP1                 0.050   restin isoform a 
ANKRD44               0.049   ankyrin repeat domain 44 
DAPK1                 0.049   death-associated protein kinase 1 
ANKRD28               0.048   ankyrin repeat domain 28 
ANK3                  0.048   ankyrin 3 isoform 1 
ANKDD1A               0.048   ankyrin repeat and death domain containing 1A 
CCDC18                0.047   sarcoma antigen NY-SAR-41 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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