Guide to the Human Genome
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Name: RBM34 Sequence: fasta or formatted (430aa) NCBI GI: 238859597
Description:

RNA binding motif protein 34 isoform 1

Referenced in:

RNA-binding Proteins

Other entries for this name:
alt prot [225aa] RNA binding motif protein 34 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         26           2
 C cysteine            0.5          2           1
 D aspartate           3.7         16           2
 E glutamate           8.4         36           4
 F phenylalanine       3.5         15           2
 G glycine             6.5         28           2
 H histidine           1.9          8           2
 I isoleucine          4.4         19           1
 K lysine             14.2         61           3
 L leucine             7.4         32           2
 M methionine          1.4          6           1
 N asparagine          4.7         20           2
 P proline             4.2         18           2
 Q glutamine           5.6         24           2
 R arginine            7.4         32           1
 S serine              8.1         35           2
 T threonine           4.0         17           1
 V valine              6.7         29           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RNA binding motif protein 34 isoform 1 
RBM34                 0.500   RNA binding motif protein 34 isoform 2 
PABPN1                0.052   poly(A) binding protein, nuclear 1 
CSTF2T                0.049   cleavage stimulation factor, 3' pre-RNA, subunit 2, ...
TIAL1                 0.048   TIA-1 related protein isoform 2 
CSTF2                 0.047   cleavage stimulation factor subunit 2 
LOC390748             0.045   similar to poly(A)binding protein nuclear-like 1 [H...
RBM19                 0.044   RNA binding motif protein 19 
RBM19                 0.044   RNA binding motif protein 19 
RBM19                 0.044   RNA binding motif protein 19 
RBMX2                 0.044   RNA binding motif protein, X-linked 2 
SART3                 0.043   squamous cell carcinoma antigen recognized by T cells...
TIAL1                 0.043   TIA-1 related protein isoform 1 
RBM39                 0.042   RNA binding motif protein 39 isoform b 
RBM39                 0.042   RNA binding motif protein 39 isoform a 
RBM3                  0.042   RNA binding motif protein 3 
HNRNPA2B1             0.039   heterogeneous nuclear ribonucleoprotein A2/B1 isofor...
PABPC4                0.039   poly A binding protein, cytoplasmic 4 isoform 3 [Ho...
PABPC4                0.039   poly A binding protein, cytoplasmic 4 isoform 2 [Homo...
PABPC4                0.039   poly A binding protein, cytoplasmic 4 isoform 1 [Ho...
HNRNPA0               0.038   heterogeneous nuclear ribonucleoprotein A0 
ZCRB1                 0.037   zinc finger CCHC-type and RNA binding motif 1 
DAZAP1                0.037   DAZ associated protein 1 isoform a 
DAZAP1                0.037   DAZ associated protein 1 isoform b 
HNRNPAB               0.037   heterogeneous nuclear ribonucleoprotein A/B isoform ...
HNRNPAB               0.037   heterogeneous nuclear ribonucleoprotein A/B isoform ...
HNRNPD                0.036   heterogeneous nuclear ribonucleoprotein D isoform b ...
HNRNPD                0.036   heterogeneous nuclear ribonucleoprotein D isoform d ...
EIF4B                 0.036   eukaryotic translation initiation factor 4B 
RBM23                 0.036   RNA binding motif protein 23 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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