Guide to the Human Genome
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Name: RBM34 Sequence: fasta or formatted (225aa) NCBI GI: 238859599
Description:

RNA binding motif protein 34 isoform 2

Referenced in:

RNA-binding Proteins

Other entries for this name:
alt prot [430aa] RNA binding motif protein 34 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         11           1
 C cysteine            0.9          2           1
 D aspartate           4.0          9           2
 E glutamate          10.7         24           4
 F phenylalanine       3.1          7           2
 G glycine             5.8         13           2
 H histidine           1.8          4           2
 I isoleucine          4.0          9           1
 K lysine             12.4         28           3
 L leucine             6.7         15           1
 M methionine          0.9          2           1
 N asparagine          3.6          8           1
 P proline             5.8         13           2
 Q glutamine           6.7         15           1
 R arginine            8.0         18           1
 S serine              8.4         19           2
 T threonine           4.0          9           1
 V valine              7.1         16           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RNA binding motif protein 34 isoform 2 
RBM34                 0.969   RNA binding motif protein 34 isoform 1 
LOC100294088          0.052   PREDICTED: hypothetical protein, partial 
SART3                 0.038   squamous cell carcinoma antigen recognized by T cells...
WDR87                 0.036   NYD-SP11 protein 
NCOR1                 0.036   nuclear receptor co-repressor 1 
LOC100133599          0.033   PREDICTED: hypothetical protein 
LOC728636             0.033   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC647042             0.033   PREDICTED: hypothetical protein isoform 2 
LOC647042             0.033   PREDICTED: hypothetical protein isoform 1 
CALD1                 0.033   caldesmon 1 isoform 1 
UPF2                  0.033   UPF2 regulator of nonsense transcripts homolog [Homo...
UPF2                  0.033   UPF2 regulator of nonsense transcripts homolog [Homo...
CCDC45                0.033   coiled-coil domain containing 45 
LOC440295             0.033   hypothetical protein LOC440295 
NOP56                 0.033   nucleolar protein 5A 
LOC100133220          0.031   PREDICTED: hypothetical protein 
G3BP1                 0.031   Ras-GTPase-activating protein SH3-domain-binding prot...
G3BP1                 0.031   Ras-GTPase-activating protein SH3-domain-binding pro...
LOC645202             0.031   PREDICTED: hypothetical protein LOC645202 
FAM133A               0.031   hypothetical protein LOC286499 
MAP7D2                0.031   MAP7 domain containing 2 
SMARCE1               0.029   SWI/SNF-related matrix-associated actin-dependent re...
MCM3                  0.029   minichromosome maintenance complex component 3 
RBBP6                 0.029   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.029   retinoblastoma-binding protein 6 isoform 1 
RBM26                 0.029   RNA binding motif protein 26 
GPATCH4               0.029   G patch domain containing 4 isoform 2 
GPATCH4               0.029   G patch domain containing 4 isoform 1 
PSIP1                 0.029   PC4 and SFRS1 interacting protein 1 isoform 2 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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