LYSMD2 15981

Name: LYSMD2	Sequence: fasta or formatted (215aa)		NCBI GI: 23503313
Description: LysM, putative peptidoglycan-binding, domain containing 2 isoform 1		Not currently referenced in the text
Other entries for this name: alt prot {124aa} LysM, putative peptidoglycan-binding, domain containing 2 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 18 2 C cysteine 0.5 1 1 D aspartate 4.7 10 1 E glutamate 10.2 22 3 F phenylalanine 2.3 5 1 G glycine 5.1 11 2 H histidine 1.4 3 1 I isoleucine 3.7 8 1 K lysine 5.1 11 2 L leucine 9.8 21 2 M methionine 0.9 2 1 N asparagine 3.3 7 1 P proline 9.3 20 3 Q glutamine 4.2 9 1 R arginine 7.0 15 1 S serine 12.6 27 2 T threonine 4.7 10 1 V valine 5.1 11 2 W tryptophan 0.0 0 0 Y tyrosine 1.9 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LysM, putative peptidoglycan-binding, domain contain... LYSMD2 0.559 LysM, putative peptidoglycan-binding, domain contai... LYSMD1 0.237 LysM, putative peptidoglycan-binding, domain contain... LYSMD1 0.139 LysM, putative peptidoglycan-binding, domain contai... LYSMD3 0.038 LysM, putative peptidoglycan-binding, domain contain... OXR1 0.030 oxidation resistance 1 isoform 2 NCOR2 0.028 nuclear receptor co-repressor 2 isoform 2 NCOR2 0.028 nuclear receptor co-repressor 2 isoform 1 OXR1 0.023 oxidation resistance 1 isoform 1 MMP21 0.023 matrix metalloproteinase 21 preproprotein ATAD5 0.020 ATPase family, AAA domain containing 5 MICALCL 0.020 MICAL C-terminal like KCNH2 0.020 voltage-gated potassium channel, subfamily H, member... KCNH2 0.020 voltage-gated potassium channel, subfamily H, member ... KIAA1211 0.020 hypothetical protein LOC57482 TRERF1 0.020 transcriptional regulating factor 1 SFRS16 0.020 splicing factor, arginine/serine-rich 16 CRKRS 0.018 Cdc2-related kinase, arginine/serine-rich isoform 2... CRKRS 0.018 Cdc2-related kinase, arginine/serine-rich isoform 1... CNGB1 0.018 cyclic nucleotide gated channel beta 1 isoform a [H... ASPH 0.018 aspartate beta-hydroxylase isoform a SYNPO 0.018 synaptopodin isoform B SVIL 0.018 supervillin isoform 2 SVIL 0.018 supervillin isoform 1 MAGEA9B 0.018 melanoma antigen family A, 9 -like MAGEA9 0.018 melanoma antigen family A, 9 CABP1 0.018 calcium binding protein 1 isoform 3 ZFHX4 0.018 zinc finger homeodomain 4 NCOA7 0.018 nuclear receptor coactivator 7 isoform 2 NCOA7 0.018 nuclear receptor coactivator 7 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.