Guide to the Human Genome
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Name: SVIL Sequence: fasta or formatted (1788aa) NCBI GI: 150417971
Description:

supervillin isoform 1

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [2214aa] supervillin isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6        136           2
 C cysteine            1.5         27           2
 D aspartate           5.2         93           3
 E glutamate           9.3        167           5
 F phenylalanine       3.1         56           2
 G glycine             5.8        104           2
 H histidine           2.2         39           2
 I isoleucine          3.2         57           2
 K lysine              6.9        123           2
 L leucine             8.7        155           3
 M methionine          2.2         39           1
 N asparagine          3.4         60           2
 P proline             5.3         94           2
 Q glutamine           4.2         75           2
 R arginine            7.0        126           3
 S serine              8.8        158           4
 T threonine           6.1        109           2
 V valine              5.8        103           2
 W tryptophan          1.3         23           2
 Y tyrosine            2.5         44           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   supervillin isoform 1 
SVIL                  0.842   supervillin isoform 2 
AVIL                  0.044   advillin 
VIL1                  0.043   villin 1 
VILL                  0.039   villin-like protein 
GSN                   0.032   gelsolin isoform a precursor 
GSN                   0.032   gelsolin isoform b 
GSN                   0.032   gelsolin isoform c 
GSN                   0.032   gelsolin isoform c 
GSN                   0.032   gelsolin isoform b 
GSN                   0.032   gelsolin isoform b 
GSN                   0.032   gelsolin isoform b 
GSN                   0.032   gelsolin isoform b 
SCIN                  0.031   scinderin isoform 1 
FLII                  0.023   flightless I homolog 
SCIN                  0.023   scinderin isoform 2 
CAPG                  0.010   gelsolin-like capping protein 
BOD1L                 0.006   biorientation of chromosomes in cell division 1-like...
EPB49                 0.005   erythrocyte membrane protein band 4.9 isoform 1 [Ho...
EPB49                 0.005   erythrocyte membrane protein band 4.9 isoform 3 [Ho...
EPB49                 0.005   erythrocyte membrane protein band 4.9 isoform 2 [Ho...
EPB49                 0.005   erythrocyte membrane protein band 4.9 isoform 2 [Ho...
EPB49                 0.005   erythrocyte membrane protein band 4.9 isoform 1 [Ho...
EPB49                 0.005   erythrocyte membrane protein band 4.9 isoform 1 [Ho...
MLLT3                 0.005   myeloid/lymphoid or mixed-lineage leukemia (trithor...
ABLIM2                0.005   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.005   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.005   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.005   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.005   actin binding LIM protein family, member 2 isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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