Guide to the Human Genome
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Name: OXR1 Sequence: fasta or formatted (846aa) NCBI GI: 194306541
Description:

oxidation resistance 1 isoform 1

Referenced in:

Nuclear Receptors

Other entries for this name:
alt prot [839aa] oxidation resistance 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         43           3
 C cysteine            1.1          9           1
 D aspartate           5.8         49           1
 E glutamate           9.7         82           4
 F phenylalanine       4.4         37           2
 G glycine             5.9         50           5
 H histidine           2.4         20           1
 I isoleucine          4.6         39           2
 K lysine              7.9         67           3
 L leucine             6.9         58           3
 M methionine          2.0         17           1
 N asparagine          3.9         33           2
 P proline             5.1         43           2
 Q glutamine           5.2         44           2
 R arginine            3.8         32           2
 S serine             10.4         88           2
 T threonine           7.9         67           2
 V valine              5.0         42           2
 W tryptophan          1.1          9           1
 Y tyrosine            2.0         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   oxidation resistance 1 isoform 1 
OXR1                  0.913   oxidation resistance 1 isoform 2 
NCOA7                 0.188   nuclear receptor coactivator 7 isoform 2 
NCOA7                 0.188   nuclear receptor coactivator 7 isoform 1 
C20orf118             0.108   hypothetical protein LOC140711 
KIAA1609              0.032   hypothetical protein LOC57707 
TBC1D24               0.031   TBC1 domain family, member 24 
GPR158                0.012   G protein-coupled receptor 158 
RIF1                  0.011   RAP1 interacting factor 1 
CCDC30                0.011   coiled-coil domain containing 30 
FLG                   0.011   filaggrin 
HIVEP1                0.010   human immunodeficiency virus type I enhancer bindin...
YTHDC1                0.010   splicing factor YT521-B isoform 1 
CYLC1                 0.010   cylicin, basic protein of sperm head cytoskeleton 1...
SLTM                  0.009   modulator of estrogen induced transcription isoform ...
DSPP                  0.009   dentin sialophosphoprotein preproprotein 
BOD1L                 0.009   biorientation of chromosomes in cell division 1-like...
ITSN1                 0.009   intersectin 1 isoform ITSN-s 
ITSN1                 0.009   intersectin 1 isoform ITSN-l 
CENPE                 0.009   centromere protein E 
LRRCC1                0.008   sodium channel associated protein 2 isoform b [Homo...
LRRCC1                0.008   sodium channel associated protein 2 isoform a [Homo...
IWS1                  0.008   IWS1 homolog 
RTF1                  0.008   Paf1/RNA polymerase II complex component 
MS4A14                0.008   membrane-spanning 4-domains, subfamily A, member 14...
MS4A14                0.008   membrane-spanning 4-domains, subfamily A, member 14...
MDN1                  0.008   MDN1, midasin homolog 
CXorf15               0.008   gamma-taxilin 
PCLO                  0.008   piccolo isoform 2 
PCLO                  0.008   piccolo isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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