LYSMD3 36527

Name: LYSMD3	Sequence: fasta or formatted (306aa)		NCBI GI: 84370276
Description: LysM, putative peptidoglycan-binding, domain containing 3		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 17 2 C cysteine 1.6 5 2 D aspartate 7.8 24 2 E glutamate 5.9 18 2 F phenylalanine 2.9 9 2 G glycine 4.6 14 1 H histidine 2.9 9 2 I isoleucine 6.9 21 2 K lysine 5.6 17 2 L leucine 7.2 22 2 M methionine 1.3 4 1 N asparagine 3.9 12 2 P proline 4.2 13 2 Q glutamine 7.2 22 2 R arginine 5.6 17 2 S serine 10.5 32 2 T threonine 5.2 16 1 V valine 6.9 21 2 W tryptophan 1.0 3 2 Y tyrosine 3.3 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LysM, putative peptidoglycan-binding, domain contain... LYSMD4 0.108 LysM, putative peptidoglycan-binding, domain contain... LYSMD1 0.025 LysM, putative peptidoglycan-binding, domain contain... LYSMD2 0.025 LysM, putative peptidoglycan-binding, domain contain... KCP 0.012 cysteine rich BMP regulator 2 isoform 2 KCP 0.012 cysteine rich BMP regulator 2 isoform 1 DLEC1 0.012 deleted in lung and esophageal cancer 1 isoform DLEC... DLEC1 0.012 deleted in lung and esophageal cancer 1 isoform DLEC... C10orf71 0.008 hypothetical protein LOC118461 isoform 1 SPTAN1 0.008 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTAN1 0.008 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... PDS5B 0.008 PDS5, regulator of cohesion maintenance, homolog B [H... MAP1A 0.008 microtubule-associated protein 1A OTOL1 0.008 hypothetical protein LOC131149 OSBPL1A 0.007 oxysterol-binding protein-like 1A isoform A OSBPL1A 0.007 oxysterol-binding protein-like 1A isoform B SON 0.007 SON DNA-binding protein isoform F SON 0.007 SON DNA-binding protein isoform B VAMP2 0.007 vesicle-associated membrane protein 2 (synaptobrevi... RERE 0.007 atrophin-1 like protein isoform b RERE 0.007 atrophin-1 like protein isoform a RERE 0.007 atrophin-1 like protein isoform a MAS1 0.005 MAS1 oncogene NFIL3 0.005 nuclear factor, interleukin 3 regulated Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.