LYSMD1 12680

Name: LYSMD1	Sequence: fasta or formatted (179aa)		NCBI GI: 211938454
Description: LysM, putative peptidoglycan-binding, domain containing 1 isoform b		Not currently referenced in the text
Other entries for this name: alt prot {227aa} LysM, putative peptidoglycan-binding, domain containing 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 9 3 C cysteine 0.0 0 0 D aspartate 5.6 10 1 E glutamate 9.5 17 3 F phenylalanine 2.2 4 1 G glycine 6.7 12 1 H histidine 2.2 4 1 I isoleucine 4.5 8 1 K lysine 8.9 16 2 L leucine 10.6 19 1 M methionine 1.7 3 1 N asparagine 3.4 6 1 P proline 7.3 13 1 Q glutamine 4.5 8 2 R arginine 6.7 12 1 S serine 8.4 15 2 T threonine 6.7 12 1 V valine 3.4 6 1 W tryptophan 1.7 3 1 Y tyrosine 1.1 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LysM, putative peptidoglycan-binding, domain contai... LYSMD1 0.926 LysM, putative peptidoglycan-binding, domain contain... LYSMD2 0.163 LysM, putative peptidoglycan-binding, domain contai... LYSMD2 0.163 LysM, putative peptidoglycan-binding, domain contain... WDR62 0.024 WD repeat domain 62 isoform 1 WDR62 0.024 WD repeat domain 62 isoform 2 SENP1 0.024 sentrin/SUMO-specific protease 1 ZNF692 0.024 zinc finger protein 692 isoform 2 ZNF692 0.024 zinc finger protein 692 isoform 1 BMP6 0.021 bone morphogenetic protein 6 preproprotein FAM71B 0.021 family with sequence similarity 71, member B MYBBP1A 0.021 MYB binding protein 1a isoform 1 MYBBP1A 0.021 MYB binding protein 1a isoform 2 RBM27 0.018 RNA binding motif protein 27 ATF1 0.015 activating transcription factor 1 YTHDC1 0.015 splicing factor YT521-B isoform 2 LRCH4 0.015 leucine-rich repeats and calponin homology (CH) doma... YTHDC1 0.015 splicing factor YT521-B isoform 1 MYST4 0.015 MYST histone acetyltransferase (monocytic leukemia)... RP1L1 0.012 retinitis pigmentosa 1-like 1 WDR87 0.012 NYD-SP11 protein KIAA1671 0.012 hypothetical protein LOC85379 LOC100289134 0.012 PREDICTED: hypothetical protein XP_002343933 TTBK1 0.012 tau tubulin kinase 1 DNMT3A 0.012 DNA cytosine methyltransferase 3 alpha isoform a [Ho... DNMT3A 0.012 DNA cytosine methyltransferase 3 alpha isoform c [Ho... DNMT3A 0.012 DNA cytosine methyltransferase 3 alpha isoform a [Ho... SCYL2 0.012 SCY1-like 2 protein MAGEF1 0.012 melanoma antigen family F, 1 ABCF1 0.009 ATP-binding cassette, sub-family F, member 1 isoform... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.