Guide to the Human Genome
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Name: DHTKD1 Sequence: fasta or formatted (919aa) NCBI GI: 38788380
Description:

dehydrogenase E1 and transketolase domain containing 1

Referenced in:

Amino Acid Catabolism
TCA Cycle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         61           4
 C cysteine            1.4         13           1
 D aspartate           4.2         39           2
 E glutamate           6.9         63           2
 F phenylalanine       4.7         43           2
 G glycine             7.7         71           2
 H histidine           4.1         38           2
 I isoleucine          4.5         41           2
 K lysine              4.6         42           2
 L leucine            10.8         99           2
 M methionine          2.9         27           2
 N asparagine          3.0         28           2
 P proline             6.0         55           2
 Q glutamine           5.4         50           2
 R arginine            5.4         50           2
 S serine              6.6         61           2
 T threonine           4.8         44           2
 V valine              6.3         58           2
 W tryptophan          1.1         10           1
 Y tyrosine            2.8         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dehydrogenase E1 and transketolase domain containing... 
OGDHL                 0.301   oxoglutarate dehydrogenase-like isoform a 
OGDHL                 0.300   oxoglutarate dehydrogenase-like isoform b 
OGDH                  0.298   oxoglutarate (alpha-ketoglutarate) dehydrogenase (li...
OGDHL                 0.292   oxoglutarate dehydrogenase-like isoform c 
OGDH                  0.049   oxoglutarate (alpha-ketoglutarate) dehydrogenase (li...
PDHA2                 0.011   pyruvate dehydrogenase E1 alpha 2 
PDHA1                 0.009   pyruvate dehydrogenase E1 alpha 1 precursor 
BCKDHB                0.008   branched chain keto acid dehydrogenase E1 beta precur...
BCKDHB                0.008   branched chain keto acid dehydrogenase E1 beta precu...
SMC1A                 0.004   structural maintenance of chromosomes 1A 
NUMA1                 0.004   nuclear mitotic apparatus protein 1 
PSMD11                0.004   proteasome 26S non-ATPase subunit 11 
IAPP                  0.003   islet amyloid polypeptide precursor 
SRGAP2                0.003   SLIT-ROBO Rho GTPase activating protein 2 isoform a...
SRGAP2                0.003   SLIT-ROBO Rho GTPase activating protein 2 isoform b...
DCPS                  0.003   mRNA decapping enzyme 
MAN1C1                0.003   mannosidase, alpha, class 1C, member 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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