Guide to the Human Genome
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Name: PSMB10 Sequence: fasta or formatted (273aa) NCBI GI: 4506191
Description:

proteasome beta 10 subunit proprotein

Referenced in:

Proteasome

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         28           2
 C cysteine            1.8          5           2
 D aspartate           3.7         10           1
 E glutamate           5.9         16           2
 F phenylalanine       2.9          8           1
 G glycine            10.3         28           2
 H histidine           2.6          7           1
 I isoleucine          3.3          9           1
 K lysine              4.0         11           1
 L leucine            11.0         30           2
 M methionine          2.2          6           1
 N asparagine          1.8          5           1
 P proline             5.1         14           1
 Q glutamine           3.7         10           1
 R arginine            5.9         16           1
 S serine              5.1         14           2
 T threonine           9.2         25           2
 V valine              9.5         26           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   proteasome beta 10 subunit proprotein 
PSMB7                 0.586   proteasome beta 7 subunit proprotein 
PSMB9                 0.142   proteasome beta 9 subunit isoform 2 proprotein [Homo...
PSMB9                 0.142   proteasome beta 9 subunit isoform 1 proprotein 
PSMB6                 0.140   proteasome beta 6 subunit 
PSMB5                 0.107   proteasome beta 5 subunit isoform 1 
PSMB8                 0.107   proteasome beta 8 subunit isoform E2 proprotein [Hom...
PSMB8                 0.107   proteasome beta 8 subunit isoform E1 proprotein [Homo...
PSMB11                0.099   proteasome beta 11 subunit 
PSMA5                 0.080   proteasome alpha 5 subunit 
PSMB5                 0.068   proteasome beta 5 subunit isoform 3 
PSMA4                 0.060   proteasome alpha 4 subunit isoform 1 
PSMA4                 0.060   proteasome alpha 4 subunit isoform 1 
PSMA7                 0.058   proteasome alpha 7 subunit 
PSMB5                 0.053   proteasome beta 5 subunit isoform 2 
PSMB1                 0.051   proteasome beta 1 subunit 
PSMB2                 0.041   proteasome beta 2 subunit 
PSMA8                 0.035   proteasome alpha 8 subunit isoform 2 
PSMA4                 0.033   proteasome alpha 4 subunit isoform 2 
PSMA8                 0.025   proteasome alpha 8 subunit isoform 1 
PSMA2                 0.021   proteasome subunit alpha type 2 
PSMA1                 0.018   proteasome alpha 1 subunit isoform 2 
PSMA1                 0.018   proteasome alpha 1 subunit isoform 1 
PSMA8                 0.016   proteasome alpha 8 subunit isoform 3 
PSMB4                 0.016   proteasome beta 4 subunit 
PSMB3                 0.016   proteasome beta 3 subunit 
PSMA6                 0.012   proteasome alpha 6 subunit 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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