Guide to the Human Genome
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Name: ZNF645 Sequence: fasta or formatted (425aa) NCBI GI: 22749189
Description:

zinc finger protein 645

Referenced in:

Cadherins and Related Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         18           1
 C cysteine            2.8         12           1
 D aspartate           4.2         18           2
 E glutamate           3.8         16           1
 F phenylalanine       1.9          8           1
 G glycine             3.3         14           1
 H histidine           6.1         26           2
 I isoleucine          6.1         26           2
 K lysine              7.3         31           4
 L leucine             5.4         23           1
 M methionine          1.9          8           1
 N asparagine          3.8         16           2
 P proline            12.5         53           3
 Q glutamine           7.1         30           2
 R arginine            6.4         27           2
 S serine              8.7         37           2
 T threonine           4.2         18           3
 V valine              4.9         21           2
 W tryptophan          0.9          4           1
 Y tyrosine            4.5         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 645 
CBLL1                 0.481   Cas-Br-M (murine) ecotropic retroviral transforming...
FLJ22184              0.024   PREDICTED: hypothetical protein FLJ22184 
GLTSCR1               0.021   glioma tumor suppressor candidate region gene 1 [Ho...
RBM33                 0.020   RNA binding motif protein 33 
MED15                 0.019   mediator complex subunit 15 isoform b 
BRD4                  0.019   bromodomain-containing protein 4 isoform long 
POLR2A                0.018   DNA-directed RNA polymerase II A 
RAPH1                 0.018   Ras association and pleckstrin homology domains 1 is...
RERE                  0.018   atrophin-1 like protein isoform b 
RERE                  0.018   atrophin-1 like protein isoform a 
RERE                  0.018   atrophin-1 like protein isoform a 
FLJ22184              0.017   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.017   PREDICTED: hypothetical protein LOC80164 
MLL5                  0.016   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.016   myeloid/lymphoid or mixed-lineage leukemia 5 
NCOA6                 0.016   nuclear receptor coactivator 6 
FAM47C                0.016   hypothetical protein LOC442444 
RNASEN                0.016   ribonuclease III, nuclear isoform 2 
RNASEN                0.016   ribonuclease III, nuclear isoform 1 
WNK2                  0.016   WNK lysine deficient protein kinase 2 
TTN                   0.016   titin isoform N2-A 
LOC100293485          0.015   PREDICTED: hypothetical protein 
LOC100134663          0.015   PREDICTED: hypothetical protein, partial 
ZMIZ1                 0.015   retinoic acid induced 17 
SFPQ                  0.015   splicing factor proline/glutamine rich (polypyrimidin...
YLPM1                 0.015   YLP motif containing 1 
SIN3A                 0.015   transcriptional co-repressor Sin3A 
SIN3A                 0.015   transcriptional co-repressor Sin3A 
SIN3A                 0.015   transcriptional co-repressor Sin3A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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