FAM47C 34098

Name: FAM47C	Sequence: fasta or formatted (1035aa)		NCBI GI: 61966919
Description: hypothetical protein LOC442444		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.3 24 2 C cysteine 2.1 22 1 D aspartate 3.7 38 2 E glutamate 10.2 106 2 F phenylalanine 1.7 18 2 G glycine 4.8 50 1 H histidine 4.5 47 1 I isoleucine 1.3 13 2 K lysine 6.3 65 3 L leucine 9.9 102 3 M methionine 1.4 14 1 N asparagine 1.0 10 1 P proline 17.8 184 2 Q glutamine 2.3 24 1 R arginine 7.0 72 2 S serine 9.7 100 2 T threonine 5.9 61 2 V valine 6.1 63 1 W tryptophan 0.5 5 1 Y tyrosine 1.6 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC442444 FAM47A 0.278 hypothetical protein LOC158724 FAM47B 0.273 hypothetical protein LOC170062 MLL2 0.061 myeloid/lymphoid or mixed-lineage leukemia 2 FMN2 0.049 formin 2 LOC651986 0.047 PREDICTED: similar to forkhead box L2 FAM47E 0.045 hypothetical protein LOC100129583 TTN 0.040 titin isoform N2-A PRG4 0.039 proteoglycan 4 isoform D PRG4 0.039 proteoglycan 4 isoform C PRG4 0.039 proteoglycan 4 isoform B PRG4 0.039 proteoglycan 4 isoform A PRAM1 0.036 PML-RARA regulated adaptor molecule 1 MUC2 0.033 mucin 2 precursor RAPH1 0.032 Ras association and pleckstrin homology domains 1 is... FLJ22184 0.031 PREDICTED: hypothetical protein FLJ22184 ATN1 0.029 atrophin-1 ATN1 0.029 atrophin-1 PCLO 0.027 piccolo isoform 2 PCLO 0.027 piccolo isoform 1 SON 0.026 SON DNA-binding protein isoform F SON 0.026 SON DNA-binding protein isoform B BAT2 0.026 HLA-B associated transcript-2 SF3A2 0.026 splicing factor 3a, subunit 2 NACA 0.025 nascent polypeptide-associated complex alpha subuni... ESX1 0.025 extraembryonic, spermatogenesis, homeobox 1-like [Ho... BRD4 0.024 bromodomain-containing protein 4 isoform long SRCAP 0.024 Snf2-related CBP activator protein LOC284297 0.023 hypothetical protein LOC284297 CASKIN1 0.023 CASK interacting protein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.