MSC 1889

Name: MSC	Sequence: fasta or formatted (206aa)		NCBI GI: 116805332
Description: musculin		Referenced in: B cells Helix-Loop-Helix Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.7 22 2 C cysteine 1.9 4 1 D aspartate 4.4 9 1 E glutamate 8.3 17 3 F phenylalanine 1.0 2 1 G glycine 10.2 21 4 H histidine 1.0 2 1 I isoleucine 0.5 1 1 K lysine 5.8 12 2 L leucine 8.3 17 2 M methionine 1.5 3 1 N asparagine 2.9 6 1 P proline 7.8 16 2 Q glutamine 2.4 5 1 R arginine 9.7 20 1 S serine 10.7 22 2 T threonine 4.4 9 2 V valine 5.3 11 2 W tryptophan 1.0 2 1 Y tyrosine 2.4 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 musculin TCF21 0.429 transcription factor 21 TCF21 0.429 transcription factor 21 TWIST1 0.145 twist LOC100129654 0.138 PREDICTED: similar to transcription factor 23 [Homo... LOC100129654 0.138 PREDICTED: similar to transcription factor 23 [Homo... SCXB 0.135 scleraxis homolog B SCXA 0.135 scleraxis homolog A TCF15 0.135 basic helix-loop-helix transcription factor 15 [Homo... LOC100129654 0.133 PREDICTED: similar to transcription factor 23 [Homo... TWIST2 0.117 twist homolog 2 HAND2 0.110 basic helix-loop-helix transcription factor HAND2 [H... TCF23 0.105 transcription factor 23 NEUROG2 0.102 neurogenin 2 NHLH2 0.097 nescient helix loop helix 2 NHLH2 0.097 nescient helix loop helix 2 PTF1A 0.094 pancreas specific transcription factor, 1a BHLHE22 0.094 basic helix-loop-helix domain containing, class B, 5... ATOH7 0.094 atonal homolog 7 NEUROG3 0.089 neurogenin 3 NHLH1 0.089 nescient helix loop helix 1 NEUROD2 0.087 neurogenic differentiation 2 ATOH1 0.084 atonal homolog 1 HAND1 0.082 basic helix-loop-helix transcription factor HAND1 [Ho... NEUROG1 0.082 neurogenin 1 FERD3L 0.082 nephew of atonal 3 BHLHA15 0.079 basic helix-loop-helix family, member a15 NEUROD6 0.077 neurogenic differentiation 6 ASCL4 0.074 achaete-scute complex-like 4 ATOH8 0.071 atonal homolog 8 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.